9EDP
 
 | | GVIII-Chiba040502 norovirus protruding domain | | Descriptor: | CHLORIDE ION, VP1 | | Authors: | Holroyd, D.L, Kumar, A, Bruning, J.B, Hansman, G.S. | | Deposit date: | 2024-11-17 | | Release date: | 2025-03-05 | | Last modified: | 2025-04-23 | | Method: | X-RAY DIFFRACTION (1.76 Å) | | Cite: | Antigenic structural analysis of bat and human norovirus protruding (P) domains.
J.Virol., 99, 2025
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8WT1
 | | Crystal structure of S9 carboxypeptidase from Geobacillus sterothermophilus | | Descriptor: | ALANINE, CITRATE ANION, GLYCEROL, ... | | Authors: | Chandravanshi, K, Kumar, A, Sen, C, Singh, R, Bhange, G.B, Makde, R.D. | | Deposit date: | 2023-10-17 | | Release date: | 2024-03-13 | | Last modified: | 2024-04-10 | | Method: | X-RAY DIFFRACTION (2 Å) | | Cite: | Crystal structure and solution scattering of Geobacillus stearothermophilus S9 peptidase reveal structural adaptations for carboxypeptidase activity.
Febs Lett., 598, 2024
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1FMQ
 | | Cyclo-butyl-bis-furamidine complexed with dCGCGAATTCGCG | | Descriptor: | 2,5-BIS{[4-(N-CYCLOBUTYLDIAMINOMETHYL)PHENYL]}FURAN, 5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3', MAGNESIUM ION | | Authors: | Simpson, I.J, Lee, M, Kumar, A, Boykin, D.W, Neidle, S. | | Deposit date: | 2000-08-18 | | Release date: | 2000-09-11 | | Last modified: | 2024-02-07 | | Method: | X-RAY DIFFRACTION (2 Å) | | Cite: | DNA minor groove interactions and the biological activity of 2,5-bis-[4-(N-alkylamidino)phenyl] furans
Bioorg.Med.Chem.Lett., 10, 2000
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1FMS
 | | Structure of complex between cyclohexyl-bis-furamidine and d(CGCGAATTCGCG) | | Descriptor: | 2,5-BIS{[4-(N-CYCLOHEXYLDIAMINOMETHYL)PHENYL]}FURAN, 5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3', MAGNESIUM ION | | Authors: | Simpson, I.J, Lee, M, Kumar, A, Boykin, D.W, Neidle, S. | | Deposit date: | 2000-08-18 | | Release date: | 2000-09-11 | | Last modified: | 2024-02-07 | | Method: | X-RAY DIFFRACTION (1.9 Å) | | Cite: | DNA minor groove interactions and the biological activity of 2,5-bis-[4-(N-alkylamidino)phenyl] furans
Bioorg.Med.Chem.Lett., 10, 2000
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6A8Z
 | | Crystal structure of M1 zinc metallopeptidase from Deinococcus radiodurans | | Descriptor: | SODIUM ION, TYROSINE, ZINC ION, ... | | Authors: | Agrawal, R, Kumar, A, Makde, R.D. | | Deposit date: | 2018-07-11 | | Release date: | 2019-07-17 | | Last modified: | 2023-11-22 | | Method: | X-RAY DIFFRACTION (2.045 Å) | | Cite: | Two-domain aminopeptidase of M1 family: Structural features for substrate binding and gating in absence of C-terminal domain.
J.Struct.Biol., 208, 2019
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7F7A
 | | Crystal structure of Non-specific class-C acid phosphatase from Sphingobium sp. RSMS bound to Adenine at pH 9 | | Descriptor: | ADENINE, Acid phosphatase, MAGNESIUM ION | | Authors: | Gaur, N.K, Kumar, A, Sunder, S, Mukhopadhyaya, R, Makde, R.D. | | Deposit date: | 2021-06-28 | | Release date: | 2022-07-06 | | Last modified: | 2024-11-20 | | Method: | X-RAY DIFFRACTION (2.7 Å) | | Cite: | Non-Specific Class-c acidphosphatase from Sphingobium sp. RSMS
To Be Published
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7F7D
 | | Crystal structure of Non-specific class-C acid phosphatase from Sphingobium sp. RSMS bound to Adenosine at pH 5.5 | | Descriptor: | ADENOSINE, Acid phosphatase, DI(HYDROXYETHYL)ETHER, ... | | Authors: | Gaur, N.K, Kumar, A, Sunder, S, Mukhopadhyaya, R, Makde, R.D. | | Deposit date: | 2021-06-28 | | Release date: | 2022-07-06 | | Last modified: | 2024-10-16 | | Method: | X-RAY DIFFRACTION (2.2 Å) | | Cite: | Non-Specific Class-c acidphosphatase from Sphingobium sp. RSMS
To Be Published
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7F7B
 | | Crystal structure of Non-specific class-C acid phosphatase from Sphingobium sp. RSMS bound to BIS-TRIS at pH 5.5 | | Descriptor: | 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Acid phosphatase, MAGNESIUM ION, ... | | Authors: | Gaur, N.K, Kumar, A, Sunder, S, Mukhopadhyaya, R, Makde, R.D. | | Deposit date: | 2021-06-28 | | Release date: | 2022-07-06 | | Last modified: | 2024-10-16 | | Method: | X-RAY DIFFRACTION (2.34 Å) | | Cite: | Non-Specific Class-c acidphosphatase from Sphingobium sp. RSMS
To Be Published
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7CLE
 | | Non-Specific Class-c acidphosphatase from Sphingobium sp. RSMS | | Descriptor: | Acid phosphatase, MAGNESIUM ION | | Authors: | Gaur, N.K, Kumar, A, Sunder, S, Mukhopadhyaya, R, Makde, R.D. | | Deposit date: | 2020-07-20 | | Release date: | 2021-11-10 | | Last modified: | 2024-10-09 | | Method: | X-RAY DIFFRACTION (2.342 Å) | | Cite: | Non-Specific Class-c acidphosphatase from Sphingobium sp. RSMS
To Be Published
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7F7C
 | | Crystal structure of Non-specific class-C acid phosphatase from Sphingobium sp. RSMS bound to Adenosine at pH 5.5 | | Descriptor: | ADENOSINE, Acid phosphatase, MAGNESIUM ION, ... | | Authors: | Gaur, N.K, Kumar, A, Sunder, S, Mukhopadhyaya, R, Makde, R.D. | | Deposit date: | 2021-06-28 | | Release date: | 2022-07-06 | | Last modified: | 2024-11-13 | | Method: | X-RAY DIFFRACTION (2.2 Å) | | Cite: | Non-Specific Class-c acidphosphatase from Sphingobium sp. RSMS
To Be Published
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7FCR
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7FCS
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7W9A
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8XZC
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7TJI
 | | S. cerevisiae ORC bound to 84 bp ARS1 DNA and Cdc6 (state 2) with flexible Orc6 N-terminal domain | | Descriptor: | ADENOSINE-5'-TRIPHOSPHATE, Cell division control protein 6, DNA, ... | | Authors: | Schmidt, J.M, Yang, R, Kumar, A, Hunker, O, Bleichert, F. | | Deposit date: | 2022-01-16 | | Release date: | 2022-10-05 | | Last modified: | 2024-06-05 | | Method: | ELECTRON MICROSCOPY (2.7 Å) | | Cite: | A mechanism of origin licensing control through autoinhibition of S. cerevisiae ORC·DNA·Cdc6.
Nat Commun, 13, 2022
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7TJH
 | | S. cerevisiae ORC bound to 84 bp ARS1 DNA and Cdc6 (state 1) with flexible Orc6 N-terminal domain | | Descriptor: | ADENOSINE-5'-TRIPHOSPHATE, Cell division control protein 6, DNA, ... | | Authors: | Schmidt, J.M, Yang, R, Kumar, A, Hunker, O, Bleichert, F. | | Deposit date: | 2022-01-16 | | Release date: | 2022-10-05 | | Last modified: | 2024-06-05 | | Method: | ELECTRON MICROSCOPY (2.5 Å) | | Cite: | A mechanism of origin licensing control through autoinhibition of S. cerevisiae ORC·DNA·Cdc6.
Nat Commun, 13, 2022
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7TJK
 | | S. cerevisiae ORC bound to 84 bp ARS1 DNA and Cdc6 (state 2) with docked Orc6 N-terminal domain | | Descriptor: | ADENOSINE-5'-TRIPHOSPHATE, Cell division control protein 6, DNA, ... | | Authors: | Schmidt, J.M, Yang, R, Kumar, A, Hunker, O, Bleichert, F. | | Deposit date: | 2022-01-16 | | Release date: | 2022-10-05 | | Last modified: | 2024-06-05 | | Method: | ELECTRON MICROSCOPY (2.7 Å) | | Cite: | A mechanism of origin licensing control through autoinhibition of S. cerevisiae ORC·DNA·Cdc6.
Nat Commun, 13, 2022
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7TJJ
 | | S. cerevisiae ORC bound to 84 bp ARS1 DNA and Cdc6 (state 1) with docked Orc6 N-terminal domain | | Descriptor: | ADENOSINE-5'-TRIPHOSPHATE, Cell division control protein 6, DNA, ... | | Authors: | Schmidt, J.M, Yang, R, Kumar, A, Hunker, O, Bleichert, F. | | Deposit date: | 2022-01-16 | | Release date: | 2022-10-05 | | Last modified: | 2024-06-05 | | Method: | ELECTRON MICROSCOPY (2.7 Å) | | Cite: | A mechanism of origin licensing control through autoinhibition of S. cerevisiae ORC·DNA·Cdc6.
Nat Commun, 13, 2022
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9EDN
 | | GII.23: Loreto1847 norovirus protruding domain | | Descriptor: | 1,2-ETHANEDIOL, CHLORIDE ION, VP1 | | Authors: | Holroyd, D.L, Kumar, A, Bruning, J.B, Hansman, G.S. | | Deposit date: | 2024-11-17 | | Release date: | 2025-03-05 | | Last modified: | 2025-04-23 | | Method: | X-RAY DIFFRACTION (1.22 Å) | | Cite: | Antigenic structural analysis of bat and human norovirus protruding (P) domains.
J.Virol., 99, 2025
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9EDM
 | | GII.9-VA97207 norovirus protruding domain | | Descriptor: | CHLORIDE ION, Capsid | | Authors: | Holroyd, D.L, Kumar, A, Bruning, J.B, Hansman, G.S. | | Deposit date: | 2024-11-17 | | Release date: | 2025-03-05 | | Last modified: | 2025-04-23 | | Method: | X-RAY DIFFRACTION (1.98 Å) | | Cite: | Antigenic structural analysis of bat and human norovirus protruding (P) domains.
J.Virol., 99, 2025
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9EDQ
 | | GX/NPIH26 bat norovirus protruding domain | | Descriptor: | SULFATE ION, VP1 | | Authors: | Holroyd, D.L, Kumar, A, Bruning, J.B, Hansman, G.S. | | Deposit date: | 2024-11-17 | | Release date: | 2025-03-05 | | Last modified: | 2025-04-23 | | Method: | X-RAY DIFFRACTION (1.63 Å) | | Cite: | Antigenic structural analysis of bat and human norovirus protruding (P) domains.
J.Virol., 99, 2025
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9EDO
 | | GII.27: Loreto0959 norovirus protruding domain | | Descriptor: | CHLORIDE ION, VP1 | | Authors: | Holroyd, D.L, Kumar, A, Bruning, J.B, Hansman, G.S. | | Deposit date: | 2024-11-17 | | Release date: | 2025-03-05 | | Last modified: | 2025-04-23 | | Method: | X-RAY DIFFRACTION (1.42 Å) | | Cite: | Antigenic structural analysis of bat and human norovirus protruding (P) domains.
J.Virol., 99, 2025
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6KRA
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7CAY
 | | Crystal Structure of Lon N-terminal domain protein from Xanthomonas campestris | | Descriptor: | ATP-dependent protease | | Authors: | Singh, R, Sharma, B, Deshmukh, S, Kumar, A, Makde, R.D. | | Deposit date: | 2020-06-10 | | Release date: | 2020-10-14 | | Last modified: | 2023-11-29 | | Method: | X-RAY DIFFRACTION (2.8 Å) | | Cite: | Crystal structure of XCC3289 from Xanthomonas campestris: homology with the N-terminal substrate-binding domain of Lon peptidase.
Acta Crystallogr.,Sect.F, 76, 2020
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8TOO
 | | Crystal structure of Epstein-Barr virus gp42 in complex with antibody 4C12 | | Descriptor: | 4C12 heavy chain, 4C12 light chain, Glycoprotein 42 | | Authors: | Bu, W, Kumar, A, Board, N, Kim, J, Dowdell, K, Zhang, S, Lei, Y, Hostal, A, Krogmann, T, Wang, Y, Pittaluga, S, Marcotrigiano, J, Cohen, J.I. | | Deposit date: | 2023-08-03 | | Release date: | 2024-03-27 | | Last modified: | 2024-11-13 | | Method: | X-RAY DIFFRACTION (2.6 Å) | | Cite: | Epstein-Barr virus gp42 antibodies reveal sites of vulnerability for receptor binding and fusion to B cells.
Immunity, 57, 2024
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