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PDB: 8 results

6GIM
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BU of 6gim by Molmil
Structure of the DNA duplex d(AAATTT)2 with [N-(3-chloro-4-((4,5-dihydro-1H-imidazol-2-yl)amino)phenyl)-4-((4,5-dihydro-1H-imidazol-2- yl)amino)benzamide] - (drug JNI18)
Descriptor: DNA (5'-D(*AP*AP*AP*TP*TP*T)-3'), MAGNESIUM ION, [4-[(3-chloranyl-4-imidazolidin-2-ylideneazaniumyl-phenyl)carbamoyl]phenyl]-imidazolidin-2-ylidene-azanium
Authors:Millan, C.R, Dardonvile, C, de Koning, H.P, Saperas, N, Campos, J.L.
Deposit date:2018-05-14
Release date:2018-08-08
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.43 Å)
Cite:Functional and structural analysis of AT-specific minor groove binders that disrupt DNA-protein interactions and cause disintegration of the Trypanosoma brucei kinetoplast.
Nucleic Acids Res., 45, 2017
4OCD
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BU of 4ocd by Molmil
In and Out the minor groove: Interaction of an AT rich-DNA with the CD27 drug
Descriptor: N1-(4,5-dihydro-1H-imidazol-2-yl)-N4-(4-((4,5-dihydro-1H-imidazol-2-yl)amino)phenyl)benzene-1,4-diamine, d(AAAATTTT)
Authors:Acosta-Reyes, F.J, Dardonville, C, de Koning, H.P, Natto, M, Subirana, J.A, Campos, J.L.
Deposit date:2014-01-08
Release date:2014-06-11
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:In and out of the minor groove: interaction of an AT-rich DNA with the drug CD27
Acta Crystallogr.,Sect.D, D70, 2014
6J9Q
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BU of 6j9q by Molmil
Crystal structure of Trypanosoma brucei gambiense glycerol kinase complex with AMP-PNP.
Descriptor: GLYCEROL, Glycerol kinase, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
Authors:Balogun, E.O, Chishima, T, Ichinose, M, Inaoka, D.K, Kido, Y, Ibrahim, B, de Koning, H, McKerrow, J.H, Watanabe, Y, Nozaki, T, Michels, P.A.M, Harada, S, Kita, K, Shiba, T.
Deposit date:2019-01-24
Release date:2020-01-29
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Reaction mechanism of the reverse reaction of African human trypanosomes glycerol kinase.
To Be Published
6J9V
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BU of 6j9v by Molmil
Crystal structure of Trypanosoma brucei gambiense glycerol kinase complex with ADP.
Descriptor: ADENOSINE-5'-DIPHOSPHATE, GLYCEROL, Glycerol kinase
Authors:Balogun, E.O, Chishima, T, Ichinose, M, Inaoka, D.K, Kido, Y, Ibrahim, B, de Koning, H, McKerrow, J.H, Watanabe, Y, Nozaki, T, Michels, P.A.M, Harada, S, Kita, K, Shiba, T.
Deposit date:2019-01-24
Release date:2020-01-29
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Reaction mechanism of the reverse reaction of African human trypanosomes glycerol kinase.
To Be Published
5LIT
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BU of 5lit by Molmil
Structure of the DNA duplex d(AAATTT)2 with the potential antiparasitic drug 6XV at 1.25 A resolution
Descriptor: 4-((4,5-dihydro-1H-imidazol-2-yl)amino)-N-(4-((4,5-dihydro-1H-imidazol-2-yl)amino)phenyl)benzamide dihydrochloride, DNA (5'-D(*AP*AP*AP*TP*TP*T)-3'), MAGNESIUM ION
Authors:Millan, C.R, Dardonville, C, de Koning, H.P, Saperas, N, Lourdes Campos, J.
Deposit date:2016-07-15
Release date:2017-06-14
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Functional and structural analysis of AT-specific minor groove binders that disrupt DNA-protein interactions and cause disintegration of the Trypanosoma brucei kinetoplast.
Nucleic Acids Res., 45, 2017
6JAE
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BU of 6jae by Molmil
Crystal structure of Trypanosoma brucei gambiense glycerol kinase complex with Pi (pyrophosphatase reaction)
Descriptor: GLYCEROL, Glycerol kinase, PHOSPHATE ION
Authors:Balogun, E.O, Chishima, T, Ichinose, M, Inaoka, D.K, Kido, Y, Ibrahim, B, Bringaud, F, de Koning, H, McKerrow, J.H, Watanabe, Y, Nozaki, T, Michels, P.A.M, Harada, S, Kita, K, Shiba, T.
Deposit date:2019-01-24
Release date:2020-01-29
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Glycerol Kinase of African Human Trypanosomes Possesses a Pyrophosphatase Activity.
To Be Published
6J9X
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BU of 6j9x by Molmil
Crystal structure of Trypanosoma brucei gambiense glycerol kinase phosphorylated at Thr12(pyrophosphatase reaction)
Descriptor: GLYCEROL, Glycerol kinase
Authors:Balogun, E.O, Chishima, T, Ichinose, M, Inaoka, D.K, Kido, Y, Ibrahim, B, Bringaud, F, de Koning, H, McKerrow, J.H, Watanabe, Y, Nozaki, T, Michels, P.A.M, Harada, S, Kita, K, Shiba, T.
Deposit date:2019-01-24
Release date:2020-01-29
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Glycerol Kinase of African Human Trypanosomes Possesses a Pyrophosphatase Activity.
To Be Published
6JAF
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BU of 6jaf by Molmil
Crystal structure of Trypanosoma brucei gambiense glycerol kinase complex with PPi (pyrophosphatase reaction)
Descriptor: GLYCEROL, Glycerol kinase, PYROPHOSPHATE 2-
Authors:Balogun, E.O, Chishima, T, Ichinose, M, Inaoka, D.K, Kido, Y, Ibrahim, B, Bringaud, F, de Koning, H, McKerrow, J.H, Watanabe, Y, Nozaki, T, Michels, P.A.M, Harada, S, Kita, K, Shiba, T.
Deposit date:2019-01-24
Release date:2020-01-29
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Glycerol Kinase of African Human Trypanosomes Possesses a Pyrophosphatase Activity.
To Be Published

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PDB entries from 2024-10-30

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