Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 171 件

8DCK
DownloadVisualize
BU of 8dck by Molmil
Structure of hemolysin A secretion system HlyB/D complex, ATP-bound
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Alpha-hemolysin translocation ATP-binding protein HlyB, MAGNESIUM ION, ...
著者Zhao, H, Chen, J.
登録日2022-06-16
公開日2022-09-14
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献The hemolysin A secretion system is a multi-engine pump containing three ABC transporters.
Cell, 185, 2022
6IK4
DownloadVisualize
BU of 6ik4 by Molmil
A Novel M23 Metalloprotease Pseudoalterin from Deep-sea
分子名称: Elastinolytic metalloprotease, GLYCEROL, ZINC ION
著者Zhao, H.L, Tang, B.L, Yang, J, Chen, X.L, Zhang, Y.Z.
登録日2018-10-14
公開日2019-10-16
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献A predator-prey interaction between a marine Pseudoalteromonas sp. and Gram-positive bacteria.
Nat Commun, 11, 2020
6VWS
DownloadVisualize
BU of 6vws by Molmil
Hexamer of Helical HIV capsid by RASTR method
分子名称: HIV capsid protein
著者Zhao, H, Iqbal, N, Asturias, F, Kvaratskhelia, M, Vanblerkom, P.
登録日2020-02-20
公開日2020-10-21
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (6.08 Å)
主引用文献Structural and mechanistic bases for a potent HIV-1 capsid inhibitor.
Science, 370, 2020
8SNL
DownloadVisualize
BU of 8snl by Molmil
Structure of human ADAM17/iRhom2 sheddase complex
分子名称: CALCIUM ION, Disintegrin and metalloproteinase domain-containing protein 17, Inactive rhomboid protein 2, ...
著者Zhao, H, Dai, Y, Wang, Y, Lee, C.H.
登録日2023-04-27
公開日2024-05-29
最終更新日2024-10-30
実験手法ELECTRON MICROSCOPY (2.78 Å)
主引用文献Structure of human ADAM17/iRhom2 sheddase complex
To Be Published
8SNN
DownloadVisualize
BU of 8snn by Molmil
Structure of mature human ADAM17/iRhom2 sheddase complex, conformation 1
分子名称: CALCIUM ION, Disintegrin and metalloproteinase domain-containing protein 17, Inactive rhomboid protein 2
著者Zhao, H, Dai, Y, Wang, Y, Lee, C.H.
登録日2023-04-27
公開日2024-05-29
最終更新日2024-10-16
実験手法ELECTRON MICROSCOPY (2.32 Å)
主引用文献Structure of mature human ADAM17/iRhom2 sheddase complex, conformation 1
To Be Published
8SNO
DownloadVisualize
BU of 8sno by Molmil
Structure of mature human ADAM17/iRhom2 sheddase complex, conformation 2
分子名称: CALCIUM ION, Disintegrin and metalloproteinase domain-containing protein 17, Inactive rhomboid protein 2
著者Zhao, H, Dai, Y, Wang, Y, Lee, C.H.
登録日2023-04-27
公開日2024-05-29
最終更新日2024-10-16
実験手法ELECTRON MICROSCOPY (2.78 Å)
主引用文献Structure of mature human ADAM17/iRhom2 sheddase complex, conformation 2
To Be Published
8SNM
DownloadVisualize
BU of 8snm by Molmil
Structure of mature human ADAM17/iRhom2 sheddase complex in complex with ADAM17 prodomain
分子名称: CALCIUM ION, Disintegrin and metalloproteinase domain-containing protein 17, Disintegrin and metalloproteinase domain-containing protein 17 propeptide, ...
著者Zhao, H, Dai, Y, Wang, Y, Lee, C.H.
登録日2023-04-27
公開日2024-05-29
実験手法ELECTRON MICROSCOPY (3.84 Å)
主引用文献Structure of mature human ADAM17/iRhom2 sheddase complex in complex with ADAM17 prodomain
To Be Published
5L35
DownloadVisualize
BU of 5l35 by Molmil
Cryo-EM structure of bacteriophage Sf6 at 2.9 Angstrom resolution
分子名称: CHLORIDE ION, Gene 5 protein
著者Zhao, H, Tang, L.
登録日2016-08-03
公開日2017-03-22
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (2.89 Å)
主引用文献Structure of a headful DNA-packaging bacterial virus at 2.9 angstrom resolution by electron cryo-microscopy.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
8T1I
DownloadVisualize
BU of 8t1i by Molmil
Atomic model of the mammalian Mediator complex with MED26 subunit
分子名称: Mediator of RNA polymerase II transcription subunit 1, Mediator of RNA polymerase II transcription subunit 10, Mediator of RNA polymerase II transcription subunit 11, ...
著者Zhao, H, Asturias, F.
登録日2023-06-02
公開日2024-06-12
最終更新日2024-10-16
実験手法ELECTRON MICROSCOPY (4.68 Å)
主引用文献An IDR-dependent mechanism for nuclear receptor control of Mediator interaction with RNA polymerase II.
Mol.Cell, 84, 2024
8T1L
DownloadVisualize
BU of 8t1l by Molmil
Atomic model of the mammalian mouse Mediator complex with CKM module
分子名称: Mediator of RNA polymerase II transcription subunit 1, Mediator of RNA polymerase II transcription subunit 10, Mediator of RNA polymerase II transcription subunit 11, ...
著者Zhao, H, Asturias, F.
登録日2023-06-02
公開日2024-07-03
最終更新日2024-10-16
実験手法ELECTRON MICROSCOPY (4.83 Å)
主引用文献A Pliable Mediator Acts as a Functional Rather Than an Architectural Bridge between Promoters and Enhancers.
To Be Published
4DZP
DownloadVisualize
BU of 4dzp by Molmil
Crystal structure of the terminase small subunit gp1 with R48A mutation of the bacterial virus sf6
分子名称: Gene 1 protein
著者Zhao, H, Tang, L.
登録日2012-03-01
公開日2012-10-17
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural and Functional Studies of the Phage Sf6 Terminase Small Subunit Reveal a DNA-Spooling Device Facilitated by Structural Plasticity.
J.Mol.Biol., 423, 2012
5C15
DownloadVisualize
BU of 5c15 by Molmil
K428A mutant nuclease domain of the large terminase subunit gp2 of bacterial virus Sf6 with Manganese
分子名称: Gene 2 protein, MANGANESE (II) ION
著者Zhao, H, Tang, L.
登録日2015-06-12
公開日2015-10-21
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.57 Å)
主引用文献Two distinct modes of metal ion binding in the nuclease active site of a viral DNA-packaging terminase: insight into the two-metal-ion catalytic mechanism.
Nucleic Acids Res., 43, 2015
5C12
DownloadVisualize
BU of 5c12 by Molmil
Nuclease domain of the large terminase subunit gp2 of bacterial virus Sf6
分子名称: Gene 2 protein, MAGNESIUM ION
著者Zhao, H, Tang, L.
登録日2015-06-12
公開日2015-10-21
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.517 Å)
主引用文献Two distinct modes of metal ion binding in the nuclease active site of a viral DNA-packaging terminase: insight into the two-metal-ion catalytic mechanism.
Nucleic Acids Res., 43, 2015
5C2F
DownloadVisualize
BU of 5c2f by Molmil
K428A mutant nuclease domain of the large terminase subunit gp2 of bacterial virus Sf6 with Manganese and beta-thujaplicinol
分子名称: 2,7-dihydroxy-4-(propan-2-yl)cyclohepta-2,4,6-trien-1-one, Gene 2 protein, MANGANESE (II) ION
著者Zhao, H, Tang, L.
登録日2015-06-15
公開日2015-10-21
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.86 Å)
主引用文献Two distinct modes of metal ion binding in the nuclease active site of a viral DNA-packaging terminase: insight into the two-metal-ion catalytic mechanism.
Nucleic Acids Res., 43, 2015
5C10
DownloadVisualize
BU of 5c10 by Molmil
Nuclease domain of the large terminase subunit gp2 of bacterial virus Sf6
分子名称: Gene 2 protein
著者Zhao, H, Tang, L.
登録日2015-06-12
公開日2015-10-21
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Two distinct modes of metal ion binding in the nuclease active site of a viral DNA-packaging terminase: insight into the two-metal-ion catalytic mechanism.
Nucleic Acids Res., 43, 2015
5C2D
DownloadVisualize
BU of 5c2d by Molmil
K428A mutant gp2c of large terminase subunit from bacteriophage sf6 with calcium
分子名称: CALCIUM ION, Gene 2 protein
著者Zhao, H, Tang, L.
登録日2015-06-15
公開日2015-10-21
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.59 Å)
主引用文献Two distinct modes of metal ion binding in the nuclease active site of a viral DNA-packaging terminase: insight into the two-metal-ion catalytic mechanism.
Nucleic Acids Res., 43, 2015
1BK9
DownloadVisualize
BU of 1bk9 by Molmil
PHOSPHOLIPASE A2 MODIFIED BY PBPB
分子名称: 1,4-BUTANEDIOL, CALCIUM ION, PHOSPHOLIPASE A2, ...
著者Zhao, H, Tang, L, Wang, X, Lin, Z, Zhou, Y.
登録日1998-07-16
公開日1999-03-02
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure of a snake venom phospholipase A2 modified by p-bromo-phenacyl-bromide.
Toxicon, 36, 1998
3NB3
DownloadVisualize
BU of 3nb3 by Molmil
The host outer membrane proteins OmpA and OmpC are packed at specific sites in the Shigella phage Sf6 virion as structural components
分子名称: Outer membrane protein A, Outer membrane protein C
著者Zhao, H, Sequeira, R.D, Galeva, N.A, Tang, L.
登録日2010-06-02
公開日2011-02-16
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (19 Å)
主引用文献The host outer membrane proteins OmpA and OmpC are associated with the Shigella phage Sf6 virion.
Virology, 409, 2011
1XBO
DownloadVisualize
BU of 1xbo by Molmil
PTP1B complexed with Isoxazole Carboxylic Acid
分子名称: 5-(3-{3-[3-HYDROXY-2-(METHOXYCARBONYL)PHENOXY]PROPENYL}PHENYL)-4-(HYDROXYMETHYL)ISOXAZOLE-3-CARBOXYLIC ACID, Protein-tyrosine phosphatase, non-receptor type 1
著者Zhao, H, Liu, G, Xin, Z, Serby, M, Pei, Z, Szczepankiewicz, B.G, Hajduk, P.J, Abad-Zapatero, C, Hutchins, C.W, Lubben, T.H, Ballaron, S.J, Hassach, D.L, Kaszubska, W, Rondinone, C.M, Trevillyan, J.M, Jirousek, M.R.
登録日2004-08-31
公開日2004-10-19
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Isoxazole carboxylic acids as protein tyrosine phosphatase 1B (PTP1B) inhibitors.
Bioorg.Med.Chem.Lett., 14, 2004
8XK8
DownloadVisualize
BU of 8xk8 by Molmil
N1D10 Fab bound to SFTSV glycoprotein-Gn
分子名称: Envelopment polyprotein, mAb N1D10 Fab heavy chain, mAb N1D10 Fab light chain
著者Zhao, H, Deng, Z.
登録日2023-12-22
公開日2024-07-10
最終更新日2024-09-11
実験手法X-RAY DIFFRACTION (3.53 Å)
主引用文献A broadly protective antibody targeting glycoprotein Gn inhibits severe fever with thrombocytopenia syndrome virus infection.
Nat Commun, 15, 2024
8HDL
DownloadVisualize
BU of 8hdl by Molmil
Crystal structure of ASFV trans geranylgeranyl diphosphate synthase B318L
分子名称: Trans-prenyltransferase
著者Zhao, H.F.
登録日2022-11-04
公開日2023-09-06
実験手法X-RAY DIFFRACTION (3.198 Å)
主引用文献Exploring AlphaFold2's Performance on Predicting Amino Acid Side-Chain Conformations and Its Utility in Crystal Structure Determination of B318L Protein.
Int J Mol Sci, 24, 2023
5GQ9
DownloadVisualize
BU of 5gq9 by Molmil
Crystal structure of Thermus thermophilus Argonaute in complex with g1C siDNA and DNA target
分子名称: DNA (5'-D(P*AP*CP*AP*AP*CP*CP*TP*AP*CP*TP*AP*CP*CP*TP*CP*G)-3'), DNA (5'-D(P*CP*GP*AP*GP*GP*TP*AP*GP*TP*AP*GP*GP*TP*TP*GP*T)-3'), MAGNESIUM ION, ...
著者Zhao, H, Sheng, G, Wang, Y.
登録日2016-08-06
公開日2017-08-09
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Crystal structure of Thermus thermophilus Argonaute in complex with g1C siDNA and DNA target
To Be Published
4IDH
DownloadVisualize
BU of 4idh by Molmil
Crystal Structure of the large terminase subunit gp2 of bacterial virus Sf6
分子名称: Gene 2 protein
著者Zhao, H, Christensen, T, Kamau, Y, Tang, L.
登録日2012-12-12
公開日2013-05-01
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.69 Å)
主引用文献Structures of the phage Sf6 large terminase provide new insights into DNA translocation and cleavage.
Proc.Natl.Acad.Sci.USA, 110, 2013
4IEI
DownloadVisualize
BU of 4iei by Molmil
Crystal Structure of the large terminase subunit gp2 of bacterial virus Sf6 complexed with ADP
分子名称: ADENOSINE-5'-DIPHOSPHATE, Gene 2 protein
著者Zhao, H, Christensen, T, Kamau, Y, Tang, L.
登録日2012-12-13
公開日2013-05-01
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.09 Å)
主引用文献Structures of the phage Sf6 large terminase provide new insights into DNA translocation and cleavage.
Proc.Natl.Acad.Sci.USA, 110, 2013
4IEE
DownloadVisualize
BU of 4iee by Molmil
Crystal Structure of the large terminase subunit gp2 of bacterial virus Sf6 complexed with ATP-r-S
分子名称: Gene 2 protein, MAGNESIUM ION, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER
著者Zhao, H, Christensen, T, Kamau, Y, Tang, L.
登録日2012-12-13
公開日2013-05-01
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.89 Å)
主引用文献Structures of the phage Sf6 large terminase provide new insights into DNA translocation and cleavage.
Proc.Natl.Acad.Sci.USA, 110, 2013

226707

件を2024-10-30に公開中

PDB statisticsPDBj update infoContact PDBjnumon