Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 480 results

7ZJE
DownloadVisualize
BU of 7zje by Molmil
C16-2
Descriptor: Transient receptor potential cation channel subfamily V member 2,Enhanced green fluorescent protein
Authors:Zhang, L, Gourdon, P, Zygmunt, P.M.
Deposit date:2022-04-10
Release date:2023-01-18
Method:ELECTRON MICROSCOPY (3.12 Å)
Cite:Cannabinoid non-cannabidiol site modulation of TRPV2 structure and function.
Nat Commun, 13, 2022
7ZJI
DownloadVisualize
BU of 7zji by Molmil
Transient receptor potential cation channel subfamily V member 2,Enhanced green fluorescent protein
Descriptor: Transient receptor potential cation channel subfamily V member 2,Enhanced green fluorescent protein
Authors:Zhang, L, Gourdon, P, Zygmunt, P.M.
Deposit date:2022-04-11
Release date:2023-01-18
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Cannabinoid non-cannabidiol site modulation of TRPV2 structure and function.
Nat Commun, 13, 2022
7ZJG
DownloadVisualize
BU of 7zjg by Molmil
Probenecid
Descriptor: Transient receptor potential cation channel subfamily V member 2
Authors:Zhang, L, Gourdon, P, Zygmunt, P.M.
Deposit date:2022-04-11
Release date:2023-01-18
Method:ELECTRON MICROSCOPY (3.49 Å)
Cite:Cannabinoid non-cannabidiol site modulation of TRPV2 structure and function.
Nat Commun, 13, 2022
7ZJD
DownloadVisualize
BU of 7zjd by Molmil
Transient receptor potential cation channel subfamily V member 2,Enhanced green fluorescent protein
Descriptor: Transient receptor potential cation channel subfamily V member 2,Enhanced green fluorescent protein
Authors:Zhang, L, Gourdon, P, Zygmunt, P.M.
Deposit date:2022-04-10
Release date:2023-01-18
Method:ELECTRON MICROSCOPY (2.94 Å)
Cite:Cannabinoid non-cannabidiol site modulation of TRPV2 structure and function.
Nat Commun, 13, 2022
7ZJH
DownloadVisualize
BU of 7zjh by Molmil
TRPV2-C16+Pro-2
Descriptor: Transient receptor potential cation channel subfamily V member 2
Authors:Zhang, L, Gourdon, P, Zygmunt, P.M.
Deposit date:2022-04-11
Release date:2023-01-18
Method:ELECTRON MICROSCOPY (3.39 Å)
Cite:Cannabinoid non-cannabidiol site modulation of TRPV2 structure and function.
Nat Commun, 13, 2022
7YDX
DownloadVisualize
BU of 7ydx by Molmil
Crystal structure of human RIPK1 kinase domain in complex with compound RI-962
Descriptor: 1-methyl-5-[2-(2-methylpropanoylamino)-[1,2,4]triazolo[1,5-a]pyridin-7-yl]-N-[(1S)-1-phenylethyl]indole-3-carboxamide, IODIDE ION, Receptor-interacting serine/threonine-protein kinase 1
Authors:Zhang, L, Wang, Y, Li, Y, Wu, C, Luo, X, Wang, T, Lei, J, Yang, S.
Deposit date:2022-07-04
Release date:2023-04-19
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.642 Å)
Cite:Generative deep learning enables the discovery of a potent and selective RIPK1 inhibitor.
Nat Commun, 13, 2022
7ELM
DownloadVisualize
BU of 7elm by Molmil
Structure of Csy-AcrIF24
Descriptor: AcrIF24, CRISPR type I-F/YPEST-associated protein Csy2, CRISPR-associated protein Csy3, ...
Authors:Zhang, L, Feng, Y.
Deposit date:2021-04-12
Release date:2022-04-20
Last modified:2022-04-27
Method:ELECTRON MICROSCOPY (2.88 Å)
Cite:Insights into the inhibition of type I-F CRISPR-Cas system by a multifunctional anti-CRISPR protein AcrIF24.
Nat Commun, 13, 2022
7ELN
DownloadVisualize
BU of 7eln by Molmil
Structure of Csy-AcrIF24-dsDNA
Descriptor: 54-MER DNA, AcrIF24, CRISPR type I-F/YPEST-associated protein Csy2, ...
Authors:Zhang, L, Feng, Y.
Deposit date:2021-04-12
Release date:2022-04-20
Last modified:2022-04-27
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Insights into the inhibition of type I-F CRISPR-Cas system by a multifunctional anti-CRISPR protein AcrIF24.
Nat Commun, 13, 2022
7CLZ
DownloadVisualize
BU of 7clz by Molmil
Crystal structure of Alp1U W187F/Y247F in complex with fluostatin C
Descriptor: BORIC ACID, D-MALATE, Fluostatin C, ...
Authors:Zhang, L, De, B.C.
Deposit date:2020-07-22
Release date:2020-10-07
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.10001016 Å)
Cite:Mutation of an atypical oxirane oxyanion hole improves regioselectivity of the alpha / beta-fold epoxide hydrolase Alp1U.
J.Biol.Chem., 295, 2020
7VTY
DownloadVisualize
BU of 7vty by Molmil
de novo designed protein
Descriptor: de novo designed protein
Authors:Zhang, L.
Deposit date:2021-10-31
Release date:2022-06-08
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Rotamer-free protein sequence design based on deep learning and self-consistency.
Nat Comput Sci, 2023
7VQV
DownloadVisualize
BU of 7vqv by Molmil
de novo design based on 1r26
Descriptor: GLYCEROL, de novo designed protein
Authors:Zhang, L.
Deposit date:2021-10-20
Release date:2022-06-08
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.53 Å)
Cite:Rotamer-free protein sequence design based on deep learning and self-consistency.
Nat Comput Sci, 2023
7VU4
DownloadVisualize
BU of 7vu4 by Molmil
de novo design based on 1r26
Descriptor: de novo design protein
Authors:Zhang, L.
Deposit date:2021-11-01
Release date:2022-06-08
Last modified:2023-06-28
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Rotamer-free protein sequence design based on deep learning and self-consistency.
Nat Comput Sci, 2023
7VQL
DownloadVisualize
BU of 7vql by Molmil
de novo designed based on 1r26
Descriptor: AMMONIUM ION, GLYCEROL, de novo designed protein
Authors:Zhang, L.
Deposit date:2021-10-20
Release date:2022-06-08
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Rotamer-free protein sequence design based on deep learning and self-consistency.
Nat Comput Sci, 2023
7VQW
DownloadVisualize
BU of 7vqw by Molmil
de novo designed protein based on 1r26
Descriptor: de novo designed protein
Authors:Zhang, L.
Deposit date:2021-10-20
Release date:2022-06-08
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Rotamer-free protein sequence design based on deep learning and self-consistency.
Nat Comput Sci, 2023
7WOL
DownloadVisualize
BU of 7wol by Molmil
Crystal structure of lipase TrLipB from Thermomocrobium roseum
Descriptor: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
Authors:Zhang, L, Fang, Y, Shi, Y, Gu, Z, Xin, Y.
Deposit date:2022-01-21
Release date:2023-01-25
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of lipase TrLipB from Thermomocrobium roseum
To Be Published
7XMK
DownloadVisualize
BU of 7xmk by Molmil
Crystal structure of human RIPK1 kinase domain in complex with compound SKLB923
Descriptor: 5-[2-(cyclopropylcarbonylamino)-[1,2,4]triazolo[1,5-a]pyridin-7-yl]-N-[(1S)-1-(3-fluorophenyl)ethyl]-1-methyl-indole-3-carboxamide, IODIDE ION, Receptor-interacting serine/threonine-protein kinase 1
Authors:Zhang, L, Wang, Y, Li, Y, Yang, S.
Deposit date:2022-04-26
Release date:2023-04-26
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.376 Å)
Cite:Design and synthesis of potent and highly selective inhibitors for the protein kinase RIPK1
To Be Published
7ZNQ
DownloadVisualize
BU of 7znq by Molmil
ABC transporter complex NosDFYL in GDN
Descriptor: COPPER (II) ION, Copper-binding lipoprotein NosL, MAGNESIUM ION, ...
Authors:Zhang, L, Mueller, C, Zipfel, S, Chami, M, Einsle, O.
Deposit date:2022-04-21
Release date:2022-08-03
Last modified:2022-10-26
Method:ELECTRON MICROSCOPY (3.04 Å)
Cite:Molecular interplay of an assembly machinery for nitrous oxide reductase.
Nature, 608, 2022
7EQG
DownloadVisualize
BU of 7eqg by Molmil
Structure of Csy-AcrIF5
Descriptor: AcrIF5, CRISPR type I-F/YPEST-associated protein Csy2, CRISPR-associated protein Csy3, ...
Authors:Zhang, L, Feng, Y.
Deposit date:2021-05-01
Release date:2022-03-09
Last modified:2022-06-08
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:AcrIF5 specifically targets DNA-bound CRISPR-Cas surveillance complex for inhibition.
Nat.Chem.Biol., 18, 2022
7C5G
DownloadVisualize
BU of 7c5g by Molmil
Crystal Structure of C150S mutant of Glyceraldehyde-3-phosphate-dehydrogenase1 from Escherichia coli complexed with PO4 at 1.98 Angstrom resolution
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, Glyceraldehyde-3-phosphate dehydrogenase, ...
Authors:Zhang, L, Liu, M.R, Yao, Y.C, Bostrom, I.K, Wang, Y.D, Chen, A.Q, Li, J.X, Gu, S.H, Ji, C.N.
Deposit date:2020-05-20
Release date:2021-05-26
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Novel Structures of Type 1 Glyceraldehyde-3-phosphate Dehydrogenase from Escherichia coli Provide New Insights into the Mechanism of Generation of 1,3-Bisphosphoglyceric Acid.
Biomolecules, 11, 2021
7C5N
DownloadVisualize
BU of 7c5n by Molmil
Crystal Structure of C150A+H177A mutant of Glyceraldehyde-3-phosphate-dehydrogenase1 from Escherichia coli at 2.0 Angstrom resolution
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, Glyceraldehyde-3-phosphate dehydrogenase, ...
Authors:Zhang, L, Liu, M.R, Bao, L.Y, Yao, Y.C, Bostrom, I.K, Wang, Y.D, Chen, A.Q, Li, J.X, Gu, S.H, Ji, C.N.
Deposit date:2020-05-20
Release date:2021-05-26
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Novel Structures of Type 1 Glyceraldehyde-3-phosphate Dehydrogenase from Escherichia coli Provide New Insights into the Mechanism of Generation of 1,3-Bisphosphoglyceric Acid.
Biomolecules, 11, 2021
7C5H
DownloadVisualize
BU of 7c5h by Molmil
Crystal Structure of Glyceraldehyde-3-phosphate dehydrogenase1 from Escherichia coli at 2.09 Angstrom resolution
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Zhang, L, Liu, M.R, Bao, L.Y, Yao, Y.C, Bostrom, I.K, Wang, Y.D, Chen, A.Q, Li, J.X, Gu, S.H, Ji, C.N.
Deposit date:2020-05-20
Release date:2021-05-26
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Novel Structures of Type 1 Glyceraldehyde-3-phosphate Dehydrogenase from Escherichia coli Provide New Insights into the Mechanism of Generation of 1,3-Bisphosphoglyceric Acid.
Biomolecules, 11, 2021
7C5R
DownloadVisualize
BU of 7c5r by Molmil
Crystal Structure of C150S mutant Glyceraldehyde-3-phosphate dehydrogenase1 from Escherichia coli complexed with BPG at 2.31 Angstrom resolution
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, GLYCERALDEHYDE-3-PHOSPHATE, ...
Authors:Zhang, L, Liu, M.R, Bao, L.Y, Yao, Y.C, Bostrom, I.K, Wang, Y.D, Chen, A.Q, Li, J.X, Gu, S.H, Ji, C.N.
Deposit date:2020-05-20
Release date:2021-05-26
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:Novel Structures of Type 1 Glyceraldehyde-3-phosphate Dehydrogenase from Escherichia coli Provide New Insights into the Mechanism of Generation of 1,3-Bisphosphoglyceric Acid.
Biomolecules, 11, 2021
7C5I
DownloadVisualize
BU of 7c5i by Molmil
Crystal Structure of C150A mutant of Glyceraldehyde-3-phosphate-dehydrogenase1 from Escherichia coli complexed with PO4 at 2.49 Angstrom resolution
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, Glyceraldehyde-3-phosphate dehydrogenase, ...
Authors:Zhang, L, Liu, M.R, Bao, L.Y, Yao, Y.C, Bostrom, I.K, Wang, Y.D, Chen, A.Q, Li, J.X, Gu, S.H, Ji, C.N.
Deposit date:2020-05-20
Release date:2021-05-26
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.48 Å)
Cite:Novel Structures of Type 1 Glyceraldehyde-3-phosphate Dehydrogenase from Escherichia coli Provide New Insights into the Mechanism of Generation of 1,3-Bisphosphoglyceric Acid.
Biomolecules, 11, 2021
7C5Q
DownloadVisualize
BU of 7c5q by Molmil
Crystal Structure of H177A mutant Glyceraldehyde-3-phosphate dehydrogenase1 from Escherichia coli complexed with BPG at 2.13 Angstrom resolution
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, GLYCERALDEHYDE-3-PHOSPHATE, ...
Authors:Zhang, L, Liu, M.R, Bao, L.Y, Yao, Y.C, Bostrom, I.K, Wang, Y.D, Chen, A.Q, Li, J.X, Gu, S.H, Ji, C.N.
Deposit date:2020-05-20
Release date:2021-05-26
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.13 Å)
Cite:Novel Structures of Type 1 Glyceraldehyde-3-phosphate Dehydrogenase from Escherichia coli Provide New Insights into the Mechanism of Generation of 1,3-Bisphosphoglyceric Acid.
Biomolecules, 11, 2021
7C5L
DownloadVisualize
BU of 7c5l by Molmil
Crystal Structure of C150S mutant of Glyceraldehyde-3-phosphate-dehydrogenase1 from Escherichia coli at 2.1 Angstrom resolution
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, Glyceraldehyde-3-phosphate dehydrogenase, ...
Authors:Zhang, L, Liu, M.R, Bao, L.Y, Yao, Y.C, Bostrom, I.K, Wang, Y.D, Chen, A.Q, Li, J.X, Gu, S.H, Ji, C.N.
Deposit date:2020-05-20
Release date:2021-05-26
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Novel Structures of Type 1 Glyceraldehyde-3-phosphate Dehydrogenase from Escherichia coli Provide New Insights into the Mechanism of Generation of 1,3-Bisphosphoglyceric Acid.
Biomolecules, 11, 2021

219515

PDB entries from 2024-05-08

PDB statisticsPDBj update infoContact PDBjnumon