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PDB: 599 results

7V9G
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BU of 7v9g by Molmil
Native BEN4 domain of protein Bend3 with DNA
Descriptor: BEN domain-containing protein 3, DNA (5'-D(*GP*CP*AP*CP*CP*GP*CP*GP*TP*GP*GP*GP*GP*CP*CP*A)-3'), DNA (5'-D(*TP*GP*GP*CP*CP*CP*CP*AP*CP*GP*CP*GP*GP*TP*GP*C)-3')
Authors:Zhang, J, Zhang, Y, You, Q, Huang, C, Zhang, T, Wang, M, Zhang, T, Yang, X, Xiong, J, Li, Y, Liu, C.P, Zhang, Z, Xu, R.M, Zhu, B.
Deposit date:2021-08-25
Release date:2022-02-16
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Highly enriched BEND3 prevents the premature activation of bivalent genes during differentiation.
Science, 375, 2022
5X5R
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BU of 5x5r by Molmil
Crystal structure of a hydrolase from Listeria innocua
Descriptor: Lin2189 protein
Authors:Zhang, J, Zhou, J.
Deposit date:2017-02-17
Release date:2018-02-21
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.644 Å)
Cite:Crystal structure of a hydrolase encoded by lin2189 from Listeria innocua
To Be Published
3JBU
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BU of 3jbu by Molmil
Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps
Descriptor: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
Authors:Zhang, J, Pan, X.J, Yan, K.G, Sun, S, Gao, N, Sui, S.F.
Deposit date:2015-10-16
Release date:2016-01-27
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.64 Å)
Cite:Mechanisms of ribosome stalling by SecM at multiple elongation steps
Elife, 4, 2015
7KJ3
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BU of 7kj3 by Molmil
SARS-CoV-2 Spike Glycoprotein with two ACE2 Bound
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Angiotensin-converting enzyme 2, ...
Authors:Zhang, J, Xiao, T.S, Cai, Y.F, Chen, B.
Deposit date:2020-10-25
Release date:2020-11-11
Last modified:2021-02-24
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:A trimeric human angiotensin-converting enzyme 2 as an anti-SARS-CoV-2 agent.
Nat.Struct.Mol.Biol., 28, 2021
7KJ5
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BU of 7kj5 by Molmil
SARS-CoV-2 Spike Glycoprotein, prefusion with one RBD up conformation
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein
Authors:Zhang, J, Xiao, T.S, Cai, Y.F, Chen, B.
Deposit date:2020-10-25
Release date:2020-11-11
Last modified:2021-02-24
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:A trimeric human angiotensin-converting enzyme 2 as an anti-SARS-CoV-2 agent.
Nat.Struct.Mol.Biol., 28, 2021
7KJ2
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BU of 7kj2 by Molmil
SARS-CoV-2 Spike Glycoprotein with one ACE2 Bound
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Angiotensin-converting enzyme 2, ...
Authors:Zhang, J, Xiao, T.S, Cai, Y.F, Chen, B.
Deposit date:2020-10-25
Release date:2020-11-11
Last modified:2021-02-24
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:A trimeric human angiotensin-converting enzyme 2 as an anti-SARS-CoV-2 agent.
Nat.Struct.Mol.Biol., 28, 2021
7KJ4
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BU of 7kj4 by Molmil
SARS-CoV-2 Spike Glycoprotein with three ACE2 Bound
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Angiotensin-converting enzyme 2, ...
Authors:Zhang, J, Xiao, T.S, Cai, Y.F, Chen, B.
Deposit date:2020-10-25
Release date:2020-11-11
Last modified:2021-02-24
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:A trimeric human angiotensin-converting enzyme 2 as an anti-SARS-CoV-2 agent.
Nat.Struct.Mol.Biol., 28, 2021
3JBV
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BU of 3jbv by Molmil
Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps
Descriptor: 30S ribosomal protein S10, 30S ribosomal protein S11, 30S ribosomal protein S12, ...
Authors:Zhang, J, Pan, X.J, Yan, K.G, Sun, S, Gao, N, Sui, S.F.
Deposit date:2015-10-16
Release date:2016-01-27
Last modified:2023-12-27
Method:ELECTRON MICROSCOPY (3.32 Å)
Cite:Mechanisms of ribosome stalling by SecM at multiple elongation steps
Elife, 4, 2015
5ZXL
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BU of 5zxl by Molmil
Structure of GldA from E.coli
Descriptor: CHLORIDE ION, GLYCEROL, Glycerol dehydrogenase, ...
Authors:Zhang, J, Lin, L.
Deposit date:2018-05-21
Release date:2019-03-20
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.794 Å)
Cite:Structure of glycerol dehydrogenase (GldA) from Escherichia coli.
Acta Crystallogr F Struct Biol Commun, 75, 2019
2GMJ
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BU of 2gmj by Molmil
Structure of Porcine Electron Transfer Flavoprotein-Ubiquinone Oxidoreductase
Descriptor: Electron transfer flavoprotein-ubiquinone oxidoreductase, FLAVIN-ADENINE DINUCLEOTIDE, IRON/SULFUR CLUSTER, ...
Authors:Zhang, J, Frerman, F.E, Kim, J.-J.P.
Deposit date:2006-04-06
Release date:2006-10-17
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structure of electron transfer flavoprotein-ubiquinone oxidoreductase and electron transfer to the mitochondrial ubiquinone pool.
Proc.Natl.Acad.Sci.Usa, 103, 2006
5X5M
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BU of 5x5m by Molmil
Crystal structure of a hydrolase encoded by lin2189 from Listeria innocua
Descriptor: (+)-Yatakemycin, DIMETHYL SULFOXIDE, Lin2189 protein
Authors:Zhang, J.
Deposit date:2017-02-16
Release date:2017-12-06
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.211 Å)
Cite:GyrI-like proteins catalyze cyclopropanoid hydrolysis to confer cellular protection
Nat Commun, 8, 2017
6LZ1
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BU of 6lz1 by Molmil
Structure of S.pombe alpha-mannosidase Ams1
Descriptor: Ams1, ZINC ION
Authors:Zhang, J, Ye, K.
Deposit date:2020-02-17
Release date:2020-09-09
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Cryo-EM structure of fission yeast tetrameric alpha-mannosidase Ams1.
Febs Open Bio, 10, 2020
5H3V
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BU of 5h3v by Molmil
Crystal structure of a Type IV Secretion System Component CagX in Helicobacter pylori
Descriptor: Cag8, DI(HYDROXYETHYL)ETHER, ISOPROPYL ALCOHOL
Authors:Zhang, J, Wu, Y, Zhao, Y, Sun, L, Keegan, R.M, Liu, Y, Isupov, M.N.
Deposit date:2016-10-27
Release date:2017-04-12
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Crystal structure of the type IV secretion system component CagX from Helicobacter pylori
Acta Crystallogr F Struct Biol Commun, 73, 2017
2GMH
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BU of 2gmh by Molmil
Structure of Porcine Electron Transfer Flavoprotein-Ubiquinone Oxidoreductase in Complexed with Ubiquinone
Descriptor: 1,2-ETHANEDIOL, 2,3-DIMETHOXY-5-METHYL-6-(3,11,15,19-TETRAMETHYL-EICOSA-2,6,10,14,18-PENTAENYL)-[1,4]BENZOQUINONE, Electron transfer flavoprotein-ubiquinone oxidoreductase, ...
Authors:Zhang, J, Frerman, F.E, Kim, J.-J.P.
Deposit date:2006-04-06
Release date:2006-10-17
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure of electron transfer flavoprotein-ubiquinone oxidoreductase and electron transfer to the mitochondrial ubiquinone pool.
Proc.Natl.Acad.Sci.Usa, 103, 2006
6AR6
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BU of 6ar6 by Molmil
Clostridioides difficile toxinB with DLD-4 darpin
Descriptor: DLD-4 darpin, Toxin B
Authors:Zhang, J, Jiang, M.
Deposit date:2017-08-21
Release date:2018-08-22
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (9 Å)
Cite:Clostridioides difficile toxinB with DLD-4 darpin
To Be Published
4LCK
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BU of 4lck by Molmil
Co-crystal structure of a T-box riboswitch stem I domain in complex with its cognate tRNA
Descriptor: MAGNESIUM ION, Ribosomal protein YbxF, STRONTIUM ION, ...
Authors:Zhang, J, Ferre-D'Amare, A.R.
Deposit date:2013-06-21
Release date:2013-07-31
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Co-crystal structure of a T-box riboswitch stem I domain in complex with its cognate tRNA.
Nature, 500, 2013
7KRR
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BU of 7krr by Molmil
Structural impact on SARS-CoV-2 spike protein by D614G substitution
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Zhang, J, Cai, Y.F, Xiao, T.S, Lu, J.M, Peng, H.Q, Sterling, S.M, Walsh Jr, R.M, Volloch, S.R, Zhu, H.S, Woosley, A.N, Yang, W, Sliz, P, Chen, B.
Deposit date:2020-11-20
Release date:2021-03-24
Last modified:2021-05-12
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Structural impact on SARS-CoV-2 spike protein by D614G substitution.
Science, 372, 2021
7KRS
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BU of 7krs by Molmil
Structural impact on SARS-CoV-2 spike protein by D614G substitution
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Zhang, J, Cai, Y.F, Xiao, T.S, Lu, J.M, Peng, H.Q, Sterling, S.M, Walsh Jr, R.M, Volloch, S.R, Zhu, H.S, Woosley, A.N, Yang, W, Sliz, P, Chen, B.
Deposit date:2020-11-20
Release date:2021-03-24
Last modified:2021-05-12
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structural impact on SARS-CoV-2 spike protein by D614G substitution.
Science, 372, 2021
7KRQ
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BU of 7krq by Molmil
Structural impact on SARS-CoV-2 spike protein by D614G substitution
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Zhang, J, Cai, Y.F, Xiao, T.S, Lu, J.M, Peng, H.Q, Sterling, S.M, Walsh Jr, R.M, Volloch, S.R, Zhu, H.S, Woosley, A.N, Yang, W, Sliz, P, Chen, B.
Deposit date:2020-11-20
Release date:2021-03-31
Last modified:2021-05-12
Method:ELECTRON MICROSCOPY (3.44 Å)
Cite:Structural impact on SARS-CoV-2 spike protein by D614G substitution.
Science, 372, 2021
5X16
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BU of 5x16 by Molmil
Sirt6 apo structure
Descriptor: GLYCEROL, NAD-dependent protein deacetylase sirtuin-6, TERTIARY-BUTYL ALCOHOL, ...
Authors:Zhang, J, Huang, Z, Song, K.
Deposit date:2017-01-24
Release date:2018-07-04
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Sirt6 apo structure
To Be Published
5Z8H
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BU of 5z8h by Molmil
APC with an inhibitor
Descriptor: Adenomatous polyposis coli protein, GLYCEROL, Peptide inhibitor
Authors:Zhang, J, Yang, X.Y, Song, K.
Deposit date:2018-01-31
Release date:2019-02-06
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:APC with an inhibitor
To Be Published
3STA
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BU of 3sta by Molmil
Crystal structure of ClpP in tetradecameric form from Staphylococcus aureus
Descriptor: ATP-dependent Clp protease proteolytic subunit
Authors:Zhang, J, Ye, F, Lan, L, Jiang, H, Luo, C, Yang, C.-G.
Deposit date:2011-07-09
Release date:2011-09-07
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:Structural switching of Staphylococcus aureus Clp protease: a key to understanding protease dynamics
J.Biol.Chem., 286, 2011
5ZY9
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BU of 5zy9 by Molmil
Structural basis for a tRNA synthetase
Descriptor: (1R,2R)-2-[(2S,4E,6E,8R,9S,11R,13S,15S,16S)-7-cyano-8,16-dihydroxy-9,11,13,15-tetramethyl-18-oxooxacyclooctadeca-4,6-dien-2-yl]cyclopentanecarboxylic acid, Threonyl-tRNA synthase, ZINC ION
Authors:Zhang, J.
Deposit date:2018-05-23
Release date:2019-06-12
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural basis for inhibition of translational functions on a tRNA synthetase
To Be Published
3ST9
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BU of 3st9 by Molmil
Crystal structure of ClpP in heptameric form from Staphylococcus aureus
Descriptor: ATP-dependent Clp protease proteolytic subunit, CALCIUM ION, GLYCEROL, ...
Authors:Zhang, J, Ye, F, Lan, L, Jiang, H, Luo, C, Yang, C.-G.
Deposit date:2011-07-09
Release date:2011-09-07
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.43 Å)
Cite:Structural switching of Staphylococcus aureus Clp protease: a key to understanding protease dynamics
J.Biol.Chem., 286, 2011
8IW5
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BU of 8iw5 by Molmil
Crystal structure of liprin-beta H2H3 dimer
Descriptor: CALCIUM ION, Liprin-beta-1
Authors:Zhang, J, Chen, S, Wei, Z.
Deposit date:2023-03-29
Release date:2023-11-08
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:KANK1 shapes focal adhesions by orchestrating protein binding, mechanical force sensing, and phase separation.
Cell Rep, 42, 2023

221051

數據於2024-06-12公開中

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