Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 784 results

8XKN
DownloadVisualize
BU of 8xkn by Molmil
Cryo-EM structure of tail tube protein
Descriptor: a protein
Authors:Zhang, H, Li, Z, Li, X.Z.
Deposit date:2023-12-23
Release date:2024-05-01
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (3.11 Å)
Cite:Insights into the modulation of bacterial NADase activity by phage proteins.
Nat Commun, 15, 2024
7YRI
DownloadVisualize
BU of 7yri by Molmil
S-adenosylmethionine sensor upstream of mTORC1
Descriptor: S-ADENOSYLMETHIONINE, S-adenosylmethionine sensor upstream of mTORC1
Authors:Zhang, H, Li, X.Z, Wen, Y.N.
Deposit date:2022-08-10
Release date:2023-08-16
Method:X-RAY DIFFRACTION (2.61 Å)
Cite:S-adenosylmethionine sensor upstream of mTORC1
To Be Published
7YRJ
DownloadVisualize
BU of 7yrj by Molmil
S-adenosylmethionine sensor upstream of mTORC1
Descriptor: S-adenosylmethionine sensor upstream of mTORC1, SINEFUNGIN
Authors:Zhang, H, Li, X.Z, Wen, Y.N.
Deposit date:2022-08-10
Release date:2023-08-16
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:S-adenosylmethionine sensor upstream of mTORC1
To Be Published
8I88
DownloadVisualize
BU of 8i88 by Molmil
Cryo-EM structure of TIR-APAZ/Ago-gRNA complex
Descriptor: Piwi domain-containing protein, RNA (5'-R(P*GP*A)-3'), TIR domain-containing protein
Authors:Zhang, H, Li, Z, Yu, G.M, Li, X.Z, Wang, X.S.
Deposit date:2023-02-03
Release date:2023-07-05
Last modified:2023-09-13
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Structural insights into mechanisms of Argonaute protein-associated NADase activation in bacterial immunity.
Cell Res., 33, 2023
8IN8
DownloadVisualize
BU of 8in8 by Molmil
Cryo-EM structure of the target ssDNA-bound SIR2-APAZ/Ago-gRNA quaternary complex
Descriptor: DNA (5'-D(P*AP*AP*CP*GP*AP*CP*GP*TP*CP*TP*AP*AP*GP*AP*AP*AP*CP*CP*AP*TP*TP*AP*A)-3'), MAGNESIUM ION, Piwi domain protein, ...
Authors:Zhang, H, Li, Z, Yu, G.M, Li, X.Z, Wang, X.S.
Deposit date:2023-03-08
Release date:2023-07-05
Last modified:2023-09-13
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Structural insights into mechanisms of Argonaute protein-associated NADase activation in bacterial immunity.
Cell Res., 33, 2023
5XOO
DownloadVisualize
BU of 5xoo by Molmil
The structure of hydra Fam20 with sugar
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, ADENOSINE, Glycosaminoglycan xylosylkinase, ...
Authors:Zhang, H, Xiao, J.
Deposit date:2017-05-29
Release date:2018-04-11
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Structure and evolution of the Fam20 kinases
Nat Commun, 9, 2018
8HYJ
DownloadVisualize
BU of 8hyj by Molmil
A cryo-EM structure of KTF1-bound polymerase V transcription elongation complex
Descriptor: DNA (48-MER), DNA-directed RNA polymerase V subunit 1, DNA-directed RNA polymerase V subunit 5A, ...
Authors:Zhang, H, Zhang, Y.
Deposit date:2023-01-06
Release date:2023-06-21
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (4.3 Å)
Cite:A cryo-EM structure of KTF1-bound polymerase V transcription elongation complex.
Nat Commun, 14, 2023
8WKN
DownloadVisualize
BU of 8wkn by Molmil
Cryo-EM structure of DSR2-DSAD1
Descriptor: SIR2-like domain-containing protein, SPbeta prophage-derived uncharacterized protein YotI
Authors:Zhang, H, Li, Z, Li, X.Z.
Deposit date:2023-09-28
Release date:2024-05-01
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Insights into the modulation of bacterial NADase activity by phage proteins.
Nat Commun, 15, 2024
8W56
DownloadVisualize
BU of 8w56 by Molmil
Cryo-EM structure of DSR2-DSAD1 state 1
Descriptor: SIR2-like domain-containing protein, SPbeta prophage-derived uncharacterized protein YotI
Authors:Zhang, H, Li, Z, Li, X.Z.
Deposit date:2023-08-25
Release date:2024-05-01
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (3.59 Å)
Cite:Insights into the modulation of bacterial NADase activity by phage proteins.
Nat Commun, 15, 2024
4X2A
DownloadVisualize
BU of 4x2a by Molmil
Crystal structure of mouse glyoxalase I complexed with baicalein
Descriptor: 5,6,7-trihydroxy-2-phenyl-4H-chromen-4-one, Lactoylglutathione lyase, ZINC ION
Authors:Zhang, H, Zhai, J, Zhang, L, Li, C, Zhao, Y, Hu, X.
Deposit date:2014-11-26
Release date:2015-09-16
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:In Vitro Inhibition of Glyoxalase І by Flavonoids: New Insights from Crystallographic Analysis.
Curr Top Med Chem, 16, 2016
5XB0
DownloadVisualize
BU of 5xb0 by Molmil
1.6 A crystal structure of peptidyl-prolyl cis-trans isomerase PPIase from Pseudomonas syringae pv. tomato str. DC3000 (PSPTO DC3000)
Descriptor: L(+)-TARTARIC ACID, Peptidyl-prolyl cis-trans isomerase
Authors:Zhang, H, Gao, Y, Li, M, Chang, W.
Deposit date:2017-03-15
Release date:2017-04-19
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:1.6 A crystal structure of peptidyl-prolyl cis-trans isomerase PPIase from Pseudomonas syringae pv. tomato str. DC3000 (PSPTO DC3000)
To Be Published
6XP5
DownloadVisualize
BU of 6xp5 by Molmil
Head-Middle module of Mediator
Descriptor: HEAT, Med22, Mediator of RNA polymerase II transcription subunit 1, ...
Authors:Zhang, H.Q, Chen, D.C, Kornberg, R.D.
Deposit date:2020-07-08
Release date:2021-03-03
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Mediator structure and conformation change.
Mol.Cell, 81, 2021
8WFN
DownloadVisualize
BU of 8wfn by Molmil
Cryo-EM structure of DSR2-TTP
Descriptor: SIR2-like domain-containing protein, tail tube protein(TTP)
Authors:Zhang, H, Li, Z, Li, X.Z.
Deposit date:2023-09-19
Release date:2024-05-01
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (4.48 Å)
Cite:Cryo-EM structure of DSR2-TTP
To Be Published
4RTA
DownloadVisualize
BU of 4rta by Molmil
Cystal structure of the Dpy30 for MLL/SET1 COMPASS H3K4 trimethylation
Descriptor: FORMIC ACID, Protein dpy-30 homolog
Authors:Zhang, H.M, Li, M, Chang, W.R.
Deposit date:2014-11-14
Release date:2015-10-07
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.123 Å)
Cite:Structural implications of Dpy30 oligomerization for MLL/SET1 COMPASS H3K4 trimethylation.
Protein Cell, 6, 2015
6LJ8
DownloadVisualize
BU of 6lj8 by Molmil
Crystal structure of NDM-1 in complex with D-captopril derivative wss04134
Descriptor: 1,2-ETHANEDIOL, 2-[1-[(2S)-2-methyl-3-sulfanyl-propanoyl]piperidin-4-yl]ethanoic acid, Metallo-beta-lactamase type 2, ...
Authors:Zhang, H, Ma, G.
Deposit date:2019-12-13
Release date:2020-12-16
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structure-guided optimization of D-captopril for discovery of potent NDM-1 inhibitors.
Bioorg.Med.Chem., 29, 2020
1GP7
DownloadVisualize
BU of 1gp7 by Molmil
Acidic Phospholipase A2 from venom of Ophiophagus Hannah
Descriptor: CALCIUM ION, PHOSPHOLIPASE A2
Authors:Zhang, H, Lin, Z.
Deposit date:2001-10-30
Release date:2002-10-31
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structure of a Cardiotoxic Phospholipase A(2) from Ophiophagus Hannah with the "Pancreatic Loop"
J.Struct.Biol., 138, 2002
6LJ2
DownloadVisualize
BU of 6lj2 by Molmil
Crystal structure of NDM-1 in complex with heterodimer of D-captopril derivative wss02127 stereoisomer
Descriptor: (1R)-2-[(2S)-2-methyl-3-sulfanyl-propanoyl]-3,4-dihydro-1H-isoquinoline-1-carboxylic acid, (1S)-2-[(2S)-2-methyl-3-sulfanyl-propanoyl]-3,4-dihydro-1H-isoquinoline-1-carboxylic acid, HYDROXIDE ION, ...
Authors:Zhang, H, Ma, G.
Deposit date:2019-12-13
Release date:2020-12-16
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Structure-guided optimization of D-captopril for discovery of potent NDM-1 inhibitors.
Bioorg.Med.Chem., 29, 2020
8HS8
DownloadVisualize
BU of 8hs8 by Molmil
a bacteria protein complex
Descriptor: CRISPR-associated endonuclease Cas9, a protein
Authors:Zhang, H, Li, X.Z, Song, G.Y.
Deposit date:2022-12-17
Release date:2024-01-17
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:a bacteria protein
To Be Published
1HS1
DownloadVisualize
BU of 1hs1 by Molmil
SOLUTION STRUCTURE OF RNA HAIRPIN LOOP UUAACU AS PART OF HAIRPIN R(GCGUUAACUCGCA)
Descriptor: 5'-R(*GP*CP*GP*UP*UP*AP*AP*CP*UP*CP*GP*CP*A)-3'
Authors:Zhang, H, Culyba, M, Volkman, H, Krugh, T.R.
Deposit date:2000-12-22
Release date:2003-09-02
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structural Characterization of Six-Nucleotide RNA Hairpin loops: r(UUAAUU), r(UUAAAU), r(UUAACU)
To be Published
1HS3
DownloadVisualize
BU of 1hs3 by Molmil
SOLUTION STRUCTURE OF RNA HAIRPIN LOOP UUAAUU AS PART OF HAIRPIN R(GCGUUAAUUCGCA)
Descriptor: 5'-R(*GP*CP*GP*UP*UP*AP*AP*UP*UP*CP*GP*CP*A)-3'
Authors:Zhang, H, Culyba, M, Volkman, H, Krugh, T.R.
Deposit date:2000-12-22
Release date:2003-09-02
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structural Characterization of Six-Nucleotide RNA Hairpin loops: r(UUAAUU), r(UUAAAU), r(UUAACU)
To be Published
1HS4
DownloadVisualize
BU of 1hs4 by Molmil
SOLUTION STRUCTURE OF RNA HAIRPIN LOOP UUAAAU AS PART OF HAIRPIN R(GCGUUAAAUCGCA)
Descriptor: 5'-R(*GP*CP*GP*UP*UP*AP*AP*AP*UP*CP*GP*CP*A)-3'
Authors:Zhang, H, Culyba, M, Volkman, H, Krugh, T.R.
Deposit date:2000-12-22
Release date:2003-09-02
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structural Characterization of Six-Nucleotide RNA Hairpin loops: r(UUAAUU), r(UUAAAU), r(UUAACU)
To be Published
6LJ1
DownloadVisualize
BU of 6lj1 by Molmil
Crystal structure of NDM-1 in complex with D-captopril derivative wss02127 monomer
Descriptor: (1R)-2-[(2S)-2-methyl-3-sulfanyl-propanoyl]-3,4-dihydro-1H-isoquinoline-1-carboxylic acid, Metallo-beta-lactamase type 2, ZINC ION
Authors:Zhang, H, Ma, G.
Deposit date:2019-12-13
Release date:2020-12-16
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.151 Å)
Cite:Structure-guided optimization of D-captopril for discovery of potent NDM-1 inhibitors.
Bioorg.Med.Chem., 29, 2020
6LJ0
DownloadVisualize
BU of 6lj0 by Molmil
Crystal structure of NDM-1 in complex with D-captopril derivative wss02122
Descriptor: (2R)-1-[(2S)-2-methyl-3-sulfanyl-propanoyl]piperidine-2-carboxylic acid, Metallo-beta-lactamase type 2, ZINC ION
Authors:Zhang, H, Ma, G.
Deposit date:2019-12-13
Release date:2020-12-16
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Structure-guided optimization of D-captopril for discovery of potent NDM-1 inhibitors.
Bioorg.Med.Chem., 29, 2020
6LJ5
DownloadVisualize
BU of 6lj5 by Molmil
Crystal structure of NDM-1 in complex with D-captopril derivative wss04145
Descriptor: 1,2-ETHANEDIOL, 1-[(2S)-2-methyl-3-sulfanyl-propanoyl]piperidine-4-carboxylic acid, Metallo-beta-lactamase type 2, ...
Authors:Zhang, H, Ma, G.
Deposit date:2019-12-13
Release date:2020-12-16
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.26 Å)
Cite:Structure-guided optimization of D-captopril for discovery of potent NDM-1 inhibitors.
Bioorg.Med.Chem., 29, 2020
6LJ6
DownloadVisualize
BU of 6lj6 by Molmil
Crystal structure of NDM-1 in complex with D-captopril derivative wss05008
Descriptor: 1-[(2S)-2-methyl-3-sulfanyl-propanoyl]piperidine-4-carboxamide, Metallo-beta-lactamase type 2, ZINC ION
Authors:Zhang, H, Ma, G.
Deposit date:2019-12-13
Release date:2020-12-16
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.27 Å)
Cite:Structure-guided optimization of D-captopril for discovery of potent NDM-1 inhibitors.
Bioorg.Med.Chem., 29, 2020

221051

건을2024-06-12부터공개중

PDB statisticsPDBj update infoContact PDBjnumon