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PDB: 229 件

5HV2
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Rifampin phosphotransferase G527Y mutant from Listeria monocytogenes
分子名称: Phosphoenolpyruvate synthase
著者Zhang, P, Qi, X.
登録日2016-01-28
公開日2016-03-30
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.912 Å)
主引用文献Structural basis of rifampin inactivation by rifampin phosphotransferase
Proc.Natl.Acad.Sci.USA, 113, 2016
6KI2
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The STAS domain of cyanobacteria bicarbonate transporter BicA
分子名称: Low affinity sulfate transporter, SULFATE ION
著者Zhang, P, Wang, C.C.
登録日2019-07-17
公開日2019-11-20
最終更新日2019-12-25
実験手法X-RAY DIFFRACTION (2.197 Å)
主引用文献Structural mechanism of the active bicarbonate transporter from cyanobacteria.
Nat.Plants, 5, 2019
6KI1
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The transmembrane domain of a cyanobacterium bicarbonate transporter BicA
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, BICARBONATE ION, Low affinity sulfate transporter, ...
著者Zhang, P, Wang, C.C.
登録日2019-07-17
公開日2019-11-20
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.809 Å)
主引用文献Structural mechanism of the active bicarbonate transporter from cyanobacteria.
Nat.Plants, 5, 2019
8JES
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Cryo-EM structure of DltB homo-tetramer
分子名称: (1S)-2-{[{[(2R)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL STEARATE, DIACYL GLYCEROL, DODECYL-BETA-D-MALTOSIDE, ...
著者Zhang, P, Liu, Z.
登録日2023-05-16
公開日2024-05-22
実験手法ELECTRON MICROSCOPY (3.42 Å)
主引用文献Structural insights into the transporting and catalyzing mechanism of DltB in LTA D-alanylation.
Nat Commun, 15, 2024
8JF2
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Cryo-EM structure of tetrameric DltB/DltC complex
分子名称: (1S)-2-{[{[(2R)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL STEARATE, D-alanyl carrier protein, DIACYL GLYCEROL, ...
著者Zhang, P, Liu, Z.
登録日2023-05-17
公開日2024-05-22
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Structural insights into the transporting and catalyzing mechanism of DltB in LTA D-alanylation.
Nat Commun, 15, 2024
8JEM
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DltB tetramer in complex with inhibitor m-AMSA
分子名称: (1S)-2-{[{[(2R)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL STEARATE, DIACYL GLYCEROL, DODECYL-BETA-D-MALTOSIDE, ...
著者Zhang, P, Liu, Z.
登録日2023-05-16
公開日2024-05-15
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (3.23 Å)
主引用文献Structural insights into the transporting and catalyzing mechanism of DltB in LTA D-alanylation.
Nat Commun, 15, 2024
8KGC
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Cryo-EM structure of human NADK tetramer
分子名称: NAD kinase
著者Zhang, P, Hu, M, Liu, Z.
登録日2023-08-18
公開日2024-08-21
実験手法ELECTRON MICROSCOPY (2.54 Å)
主引用文献Regulation of NADK tetramer conformation and activity by cancer-associated mutants
To Be Published
3P5N
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BU of 3p5n by Molmil
Structure and mechanism of the S component of a bacterial ECF transporter
分子名称: RIBOFLAVIN, Riboflavin uptake protein
著者Zhang, P, Wang, J, Shi, Y.
登録日2010-10-09
公開日2010-11-03
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (3.6 Å)
主引用文献Structure and mechanism of the S component of a bacterial ECF transporter
Nature, 468, 2010
3EPC
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CryoEM structure of poliovirus receptor bound to poliovirus type 1
分子名称: MYRISTIC ACID, Poliovirus receptor, Protein VP1, ...
著者Zhang, P, Mueller, S, Morais, M.C, Bator, C.M, Bowman, V.D, Hafenstein, S, Wimmer, E, Rossmann, M.G.
登録日2008-09-29
公開日2008-11-11
最終更新日2024-04-17
実験手法ELECTRON MICROSCOPY (8 Å)
主引用文献Crystal structure of CD155 and electron microscopic studies of its complexes with polioviruses.
Proc.Natl.Acad.Sci.USA, 105, 2008
3EPF
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CryoEM structure of poliovirus receptor bound to poliovirus type 2
分子名称: 1[2-CHLORO-4-METHOXY-PHENYL-OXYMETHYL]-4-[2,6-DICHLORO-PHENYL-OXYMETHYL]-BENZENE, MYRISTIC ACID, Poliovirus receptor, ...
著者Zhang, P, Mueller, S, Morais, M.C, Bator, C.M, Bowman, V.D, Hafenstein, S, Wimmer, E, Rossmann, M.G.
登録日2008-09-29
公開日2008-11-11
最終更新日2024-04-17
実験手法ELECTRON MICROSCOPY (9 Å)
主引用文献Crystal structure of CD155 and electron microscopic studies of its complexes with polioviruses.
Proc.Natl.Acad.Sci.USA, 105, 2008
3EPD
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CryoEM structure of poliovirus receptor bound to poliovirus type 3
分子名称: MYRISTIC ACID, Poliovirus Type3 peptide, Poliovirus receptor, ...
著者Zhang, P, Mueller, S, Morais, M.C, Bator, C.M, Bowman, V.D, Hafenstein, S, Wimmer, E, Rossmann, M.G.
登録日2008-09-29
公開日2008-11-11
最終更新日2024-04-17
実験手法ELECTRON MICROSCOPY (9 Å)
主引用文献Crystal structure of CD155 and electron microscopic studies of its complexes with polioviruses.
Proc.Natl.Acad.Sci.USA, 105, 2008
4PO2
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Crystal Structure of the Stress-Inducible Human Heat Shock Protein HSP70 Substrate-Binding Domain in Complex with Peptide Substrate
分子名称: HSP70 substrate peptide, Heat shock 70 kDa protein 1A/1B, PHOSPHATE ION, ...
著者Zhang, P, Leu, J.I, Murphy, M.E, George, D.L, Marmorstein, R.
登録日2014-02-24
公開日2014-08-20
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of the stress-inducible human heat shock protein 70 substrate-binding domain in complex with Peptide substrate.
Plos One, 9, 2014
4GJH
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Crystal Structure of the TRAF domain of TRAF5
分子名称: TNF receptor-associated factor 5
著者Zhang, P, Reichardt, A, Liang, H, Wang, Y, Cheng, D, Aliyari, R, Cheng, G, Liu, Y.
登録日2012-08-09
公開日2012-11-28
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.805 Å)
主引用文献Single Amino Acid Substitutions Confer the Antiviral Activity of the TRAF3 Adaptor Protein onto TRAF5
Sci.Signal., 5, 2012
4GHU
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Crystal structure of TRAF3/Cardif
分子名称: Mitochondrial antiviral-signaling protein, TNF receptor-associated factor 3
著者Zhang, P.
登録日2012-08-08
公開日2012-11-28
実験手法X-RAY DIFFRACTION (2.199 Å)
主引用文献Single Amino Acid Substitutions Confer the Antiviral Activity of the TRAF3 Adaptor Protein onto TRAF5
Sci.Signal., 5, 2012
2F5J
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Crystal structure of MRG domain from human MRG15
分子名称: Mortality factor 4-like protein 1
著者Zhang, P, Du, J, Ding, J.
登録日2005-11-26
公開日2006-11-14
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献The MRG domain of human MRG15 uses a shallow hydrophobic pocket to interact with the N-terminal region of PAM14
Protein Sci., 15, 2006
3TNQ
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Structure and Allostery of the PKA RIIb Tetrameric Holoenzyme
分子名称: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Protein kinase, ...
著者Zhang, P, Smith-Nguyen, E.V, Keshwani, M.M, Deal, M.S, Kornev, A.P, Taylor, S.S.
登録日2011-09-01
公開日2012-02-01
最終更新日2012-09-26
実験手法X-RAY DIFFRACTION (3.097 Å)
主引用文献Structure and allostery of the PKA RIIbeta tetrameric holoenzyme
Science, 335, 2012
3TNP
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Structure and Allostery of the PKA RIIb Tetrameric Holoenzyme
分子名称: cAMP-dependent protein kinase catalytic subunit alpha, cAMP-dependent protein kinase type II-beta regulatory subunit
著者Zhang, P, Smith-Nguyen, E.V, Keshwani, M.M, Deal, M.S, Kornev, A.P, Taylor, S.S.
登録日2011-09-01
公開日2012-02-01
最終更新日2013-02-27
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structure and allostery of the PKA RIIbeta tetrameric holoenzyme
Science, 335, 2012
2F5K
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Crystal structure of the chromo domain of human MRG15
分子名称: Mortality factor 4-like protein 1
著者Zhang, P, Du, J, Ding, J.
登録日2005-11-26
公開日2006-11-14
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structure of human MRG15 chromo domain and its binding to Lys36-methylated histone H3.
Nucleic Acids Res., 34, 2006
7FHA
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BU of 7fha by Molmil
Crystal structure of the ATP sulfurylase domain of human PAPSS2 in complex with APS
分子名称: ADENOSINE-5'-PHOSPHOSULFATE, Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 2, POTASSIUM ION, ...
著者Zhang, P, Zhang, L, Zhang, L.
登録日2021-07-29
公開日2021-12-01
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural basis for the substrate recognition mechanism of ATP-sulfurylase domain of human PAPS synthase 2.
Biochem.Biophys.Res.Commun., 586, 2022
7FH3
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Crystal structure of the ATP sulfurylase domain of human PAPSS2
分子名称: Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 2, SULFATE ION, beta-D-glucopyranose
著者Zhang, P, Zhang, L, Zhang, L.
登録日2021-07-29
公開日2021-12-01
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural basis for the substrate recognition mechanism of ATP-sulfurylase domain of human PAPS synthase 2.
Biochem.Biophys.Res.Commun., 586, 2022
7V1A
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BU of 7v1a by Molmil
Stapled TBS peptide from RIAM bound to talin R7R8 domains
分子名称: 1,2-ETHANEDIOL, ASP-ILE-ASP-GLN-MET-PHE-SER-THR-LEU-LEU-GLY-GLU-MK8-ASP-LEU-LEU-MK8-GLN-SER, Talin-1
著者Zhang, P, Gao, T, Wu, J.
登録日2022-05-11
公開日2023-06-14
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.845 Å)
主引用文献Inhibition of talin-induced integrin activation by a double-hit stapled peptide.
Structure, 31, 2023
8B56
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Crystal structure of SARS-CoV-2 main protease (MPro) in complex with the inhibitor GD-9
分子名称: (2~{S})-4-(2-chloranylethanoyl)-1-(3,4-dichlorophenyl)-~{N}-(thiophen-2-ylmethyl)piperazine-2-carboxamide, 3C-like proteinase nsp5, BROMIDE ION, ...
著者Straeter, N, Muller, C.E, Claff, T, Sylvester, K, Weisse, R, Gao, S, Song, L, Liu, X, Zhan, P.
登録日2022-09-21
公開日2023-08-09
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.823 Å)
主引用文献Discovery and Crystallographic Studies of Nonpeptidic Piperazine Derivatives as Covalent SARS-CoV-2 Main Protease Inhibitors.
J.Med.Chem., 65, 2022
8Q71
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Crystal structure of SARS-CoV-2 main protease (MPro) in complex with the inhibitor GC-67
分子名称: (2~{S})-1-(3,4-dichlorophenyl)-4-(4-methoxypyridin-3-yl)carbonyl-~{N}-(thiophen-2-ylmethyl)piperazine-2-carboxamide, 3C-like proteinase nsp5
著者Strater, N, Muller, C.E, Sylvester, K, Weisse, R.H, Useini, A, Gao, S, Song, L, Liu, Z, Zhan, P.
登録日2023-08-15
公開日2023-12-06
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.322 Å)
主引用文献Design, Synthesis, and Biological Evaluation of Trisubstituted Piperazine Derivatives as Noncovalent Severe Acute Respiratory Syndrome Coronavirus 2 Main Protease Inhibitors with Improved Antiviral Activity and Favorable Druggability.
J.Med.Chem., 66, 2023
7QHE
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Human Butyrylcholinesterase in complex with (S)-1-(4-((naphthalen-1-yl)carbamoyl)benzyl)-N-(3-((1,2,3,4-tetrahydroacridin-9-yl)amino)propyl)piperidine-3-carboxamide
分子名称: (3~{S})-1-[[4-(naphthalen-1-ylcarbamoyl)phenyl]methyl]-~{N}-[3-(1,2,3,4-tetrahydroacridin-9-ylamino)propyl]piperidine-3-carboxamide, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Brazzolotto, X, Jing, L, Zhan, P, Liu, X, Nachon, F.
登録日2021-12-12
公開日2022-12-21
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.47 Å)
主引用文献Rapid discovery and crystallography study of highly potent and selective butylcholinesterase inhibitors based on oxime-containing libraries and conformational restriction strategies.
Bioorg.Chem., 134, 2023
7QHD
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Human Butyrylcholinesterase in complex with (S)-1-(4-((2-(1H-indol-3-yl)ethyl)carbamoyl)benzyl)-N-(3-((1,2,3,4-tetrahydroacridin-9-yl)amino)propyl)piperidine-3-carboxamide
分子名称: (3~{S})-1-[[4-[2-(1~{H}-indol-3-yl)ethylcarbamoyl]phenyl]methyl]-~{N}-[3-(1,2,3,4-tetrahydroacridin-9-ylamino)propyl]piperidine-3-carboxamide, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Brazzolotto, X, Jing, L, Zhan, P, Liu, X, Nachon, F.
登録日2021-12-12
公開日2022-12-21
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.04 Å)
主引用文献Rapid discovery and crystallography study of highly potent and selective butylcholinesterase inhibitors based on oxime-containing libraries and conformational restriction strategies.
Bioorg.Chem., 134, 2023

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件を2024-09-04に公開中

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