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PDB: 743 results

7KRR
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Structural impact on SARS-CoV-2 spike protein by D614G substitution
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Zhang, J, Cai, Y.F, Xiao, T.S, Lu, J.M, Peng, H.Q, Sterling, S.M, Walsh Jr, R.M, Volloch, S.R, Zhu, H.S, Woosley, A.N, Yang, W, Sliz, P, Chen, B.
Deposit date:2020-11-20
Release date:2021-03-24
Last modified:2021-05-12
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Structural impact on SARS-CoV-2 spike protein by D614G substitution.
Science, 372, 2021
7KRS
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Structural impact on SARS-CoV-2 spike protein by D614G substitution
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Zhang, J, Cai, Y.F, Xiao, T.S, Lu, J.M, Peng, H.Q, Sterling, S.M, Walsh Jr, R.M, Volloch, S.R, Zhu, H.S, Woosley, A.N, Yang, W, Sliz, P, Chen, B.
Deposit date:2020-11-20
Release date:2021-03-24
Last modified:2021-05-12
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structural impact on SARS-CoV-2 spike protein by D614G substitution.
Science, 372, 2021
7KRQ
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BU of 7krq by Molmil
Structural impact on SARS-CoV-2 spike protein by D614G substitution
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Zhang, J, Cai, Y.F, Xiao, T.S, Lu, J.M, Peng, H.Q, Sterling, S.M, Walsh Jr, R.M, Volloch, S.R, Zhu, H.S, Woosley, A.N, Yang, W, Sliz, P, Chen, B.
Deposit date:2020-11-20
Release date:2021-03-31
Last modified:2021-05-12
Method:ELECTRON MICROSCOPY (3.44 Å)
Cite:Structural impact on SARS-CoV-2 spike protein by D614G substitution.
Science, 372, 2021
5X5M
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Crystal structure of a hydrolase encoded by lin2189 from Listeria innocua
Descriptor: (+)-Yatakemycin, DIMETHYL SULFOXIDE, Lin2189 protein
Authors:Zhang, J.
Deposit date:2017-02-16
Release date:2017-12-06
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.211 Å)
Cite:GyrI-like proteins catalyze cyclopropanoid hydrolysis to confer cellular protection
Nat Commun, 8, 2017
7XG3
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BU of 7xg3 by Molmil
CryoEM structure of type IV-A CasDinG bound NTS-nicked Csf-crRNA-dsDNA quaternary complex
Descriptor: Csf1, Csf2, Csf3, ...
Authors:Zhang, J.T, Cui, N, Huang, H.D, Jia, N.
Deposit date:2022-04-02
Release date:2023-08-09
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Type IV-A CRISPR-Csf complex: Assembly, dsDNA targeting, and CasDinG recruitment.
Mol.Cell, 83, 2023
7XG0
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BU of 7xg0 by Molmil
CryoEM structure of type IV-A Csf-crRNA-dsDNA ternary complex
Descriptor: Csf1, Csf2, Csf3, ...
Authors:Zhang, J.T, Cui, N, Huang, H.D, Jia, N.
Deposit date:2022-04-02
Release date:2023-08-09
Method:ELECTRON MICROSCOPY (2.6 Å)
Cite:Type IV-A CRISPR-Csf complex: Assembly, dsDNA targeting, and CasDinG recruitment.
Mol.Cell, 83, 2023
7XG4
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BU of 7xg4 by Molmil
CryoEM structure of type IV-A CasDinG bound NTS-nicked Csf-crRNA-dsDNA quaternary complex in a second state
Descriptor: Csf1, Csf2, Csf3, ...
Authors:Zhang, J.T, Cui, N, Huang, H.D, Jia, N.
Deposit date:2022-04-02
Release date:2023-08-09
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Type IV-A CRISPR-Csf complex: Assembly, dsDNA targeting, and CasDinG recruitment.
Mol.Cell, 83, 2023
7XG2
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BU of 7xg2 by Molmil
CryoEM structure of type IV-A NTS-nicked dsDNA bound Csf-crRNA ternary complex
Descriptor: Csf1, Csf2, Csf3, ...
Authors:Zhang, J.T, Cui, N, Huang, H.D, Jia, N.
Deposit date:2022-04-02
Release date:2023-08-09
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Type IV-A CRISPR-Csf complex: Assembly, dsDNA targeting, and CasDinG recruitment.
Mol.Cell, 83, 2023
3UIT
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BU of 3uit by Molmil
Overall structure of Patj/Pals1/Mals complex
Descriptor: ACETATE ION, InaD-like protein, MAGUK p55 subfamily member 5, ...
Authors:Zhang, J, Yang, X, Long, J, Shen, Y.
Deposit date:2011-11-06
Release date:2012-02-22
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structure of an L27 domain heterotrimer from cell polarity complex Patj/Pals1/Mals2 reveals mutually independent L27 domain assembly mode
J.Biol.Chem., 287, 2012
7YFO
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BU of 7yfo by Molmil
Structure of GluN1a E698C-GluN2D NMDA receptor in cystines crosslinked state.
Descriptor: Glutamate receptor ionotropic, NMDA 1, NMDA 2D
Authors:Zhang, J.L, Zhu, S.J, Zhang, M.
Deposit date:2022-07-08
Release date:2023-04-12
Last modified:2023-08-02
Method:ELECTRON MICROSCOPY (6.4 Å)
Cite:Distinct structure and gating mechanism in diverse NMDA receptors with GluN2C and GluN2D subunits.
Nat.Struct.Mol.Biol., 30, 2023
8TDM
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BU of 8tdm by Molmil
Cryo-EM structure of AtMSL10-K539E
Descriptor: Mechanosensitive ion channel protein 10
Authors:Zhang, J, Yuan, P.
Deposit date:2023-07-03
Release date:2023-10-18
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Open structure and gating of the Arabidopsis mechanosensitive ion channel MSL10.
Nat Commun, 14, 2023
8TDJ
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BU of 8tdj by Molmil
Cryo-EM structure of the wild-type AtMSL10 in GDN
Descriptor: Mechanosensitive ion channel protein 10
Authors:Zhang, J, Yuan, P.
Deposit date:2023-07-03
Release date:2023-10-18
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Open structure and gating of the Arabidopsis mechanosensitive ion channel MSL10.
Nat Commun, 14, 2023
8TDL
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BU of 8tdl by Molmil
Cryo-EM structure of the wild-type AtMSL10 in saposin
Descriptor: Mechanosensitive ion channel protein 10
Authors:Zhang, J, Yuan, P.
Deposit date:2023-07-03
Release date:2023-10-18
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Open structure and gating of the Arabidopsis mechanosensitive ion channel MSL10.
Nat Commun, 14, 2023
8TDK
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BU of 8tdk by Molmil
Cryo-EM structure of AtMSL10-G556V
Descriptor: Mechanosensitive ion channel protein 10
Authors:Zhang, J, Yuan, P.
Deposit date:2023-07-03
Release date:2023-10-18
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Open structure and gating of the Arabidopsis mechanosensitive ion channel MSL10.
Nat Commun, 14, 2023
7YFM
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BU of 7yfm by Molmil
Structure of GluN1b-GluN2D NMDA receptor in complex with agonists glycine and glutamate.
Descriptor: Glutamate receptor ionotropic, NMDA 2D, Isoform 6 of Glutamate receptor ionotropic, ...
Authors:Zhang, J.L, Zhu, S.J, Zhang, M.
Deposit date:2022-07-08
Release date:2023-03-29
Last modified:2023-08-02
Method:ELECTRON MICROSCOPY (5.1 Å)
Cite:Distinct structure and gating mechanism in diverse NMDA receptors with GluN2C and GluN2D subunits.
Nat.Struct.Mol.Biol., 30, 2023
7YUK
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BU of 7yuk by Molmil
Complex structure of BANP BEN domain bound to DNA
Descriptor: DNA (5'-D(*CP*TP*CP*TP*CP*GP*CP*GP*AP*GP*AP*G)-3'), GLYCEROL, Protein BANP
Authors:Zhang, J, Xiao, Y.Q, Chen, Y.X, Liu, K, Min, J.R.
Deposit date:2022-08-17
Release date:2023-04-26
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.11 Å)
Cite:Structural insights into DNA recognition by the BEN domain of the transcription factor BANP.
J.Biol.Chem., 299, 2023
7YUG
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BU of 7yug by Molmil
Structure of human BANP BEN domain
Descriptor: 1-(2-METHOXY-ETHOXY)-2-{2-[2-(2-METHOXY-ETHOXY]-ETHOXY}-ETHANE, BROMIDE ION, CHLORIDE ION, ...
Authors:Zhang, J, Xiao, Y.Q, Chen, Y.X, Liu, K, Min, J.R.
Deposit date:2022-08-17
Release date:2023-04-26
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Structural insights into DNA recognition by the BEN domain of the transcription factor BANP.
J.Biol.Chem., 299, 2023
4LCK
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BU of 4lck by Molmil
Co-crystal structure of a T-box riboswitch stem I domain in complex with its cognate tRNA
Descriptor: MAGNESIUM ION, Ribosomal protein YbxF, STRONTIUM ION, ...
Authors:Zhang, J, Ferre-D'Amare, A.R.
Deposit date:2013-06-21
Release date:2013-07-31
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Co-crystal structure of a T-box riboswitch stem I domain in complex with its cognate tRNA.
Nature, 500, 2013
5ZY9
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BU of 5zy9 by Molmil
Structural basis for a tRNA synthetase
Descriptor: (1R,2R)-2-[(2S,4E,6E,8R,9S,11R,13S,15S,16S)-7-cyano-8,16-dihydroxy-9,11,13,15-tetramethyl-18-oxooxacyclooctadeca-4,6-dien-2-yl]cyclopentanecarboxylic acid, Threonyl-tRNA synthase, ZINC ION
Authors:Zhang, J.
Deposit date:2018-05-23
Release date:2019-06-12
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural basis for inhibition of translational functions on a tRNA synthetase
To Be Published
7DDE
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BU of 7dde by Molmil
Cryo-EM structure of the Ape4 and Nbr1 complex
Descriptor: Aspartyl aminopeptidase 1,ZZ-type zinc finger-containing protein P35G2.11c,Maltose/maltodextrin-binding periplasmic protein, ZINC ION
Authors:Zhang, J, Ye, K.
Deposit date:2020-10-28
Release date:2021-07-14
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (2.26 Å)
Cite:Molecular and structural mechanisms of ZZ domain-mediated cargo selection by Nbr1.
Embo J., 40, 2021
7DD9
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BU of 7dd9 by Molmil
Cryo-EM structure of the Ams1 and Nbr1 complex
Descriptor: Alpha-mannosidase,ZZ-type zinc finger-containing protein P35G2.11c,Maltose/maltodextrin-binding periplasmic protein, ZINC ION
Authors:Zhang, J, Ye, K.
Deposit date:2020-10-28
Release date:2021-07-14
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (2.4 Å)
Cite:Molecular and structural mechanisms of ZZ domain-mediated cargo selection by Nbr1.
Embo J., 40, 2021
3ST9
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BU of 3st9 by Molmil
Crystal structure of ClpP in heptameric form from Staphylococcus aureus
Descriptor: ATP-dependent Clp protease proteolytic subunit, CALCIUM ION, GLYCEROL, ...
Authors:Zhang, J, Ye, F, Lan, L, Jiang, H, Luo, C, Yang, C.-G.
Deposit date:2011-07-09
Release date:2011-09-07
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.43 Å)
Cite:Structural switching of Staphylococcus aureus Clp protease: a key to understanding protease dynamics
J.Biol.Chem., 286, 2011
7DGD
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BU of 7dgd by Molmil
apo state of class C GPCR
Descriptor: Metabotropic glutamate receptor 1
Authors:Zhang, J.Y, Wu, L.J, Luo, F, Hua, T, Liu, Z.J.
Deposit date:2020-11-11
Release date:2021-09-22
Method:ELECTRON MICROSCOPY (3.96 Å)
Cite:Structural insights into the activation initiation of full-length mGlu1.
Protein Cell, 12, 2021
7DGE
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BU of 7dge by Molmil
intermediate state of class C GPCR
Descriptor: (S)-2-AMINO-3-(3,5-DIOXO-[1,2,4]OXADIAZOLIDIN-2-YL)-PROPIONIC ACID, Metabotropic glutamate receptor 1, nanobody
Authors:Zhang, J.Y, Wu, L.J, Luo, F, Hua, T, Liu, Z.J.
Deposit date:2020-11-11
Release date:2021-09-22
Method:ELECTRON MICROSCOPY (3.65 Å)
Cite:Structural insights into the activation initiation of full-length mGlu1.
Protein Cell, 12, 2021
3STA
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BU of 3sta by Molmil
Crystal structure of ClpP in tetradecameric form from Staphylococcus aureus
Descriptor: ATP-dependent Clp protease proteolytic subunit
Authors:Zhang, J, Ye, F, Lan, L, Jiang, H, Luo, C, Yang, C.-G.
Deposit date:2011-07-09
Release date:2011-09-07
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:Structural switching of Staphylococcus aureus Clp protease: a key to understanding protease dynamics
J.Biol.Chem., 286, 2011

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