Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 756 件

8IFL
DownloadVisualize
BU of 8ifl by Molmil
Cryo-EM structure of tetrameric SPARTA gRNA-ssDNA target complex in state 1
分子名称: MAGNESIUM ION, Piwi domain-containing protein, TIR domain-containing protein, ...
著者Zhang, J.T, Jia, N.
登録日2023-02-18
公開日2024-01-17
最終更新日2024-04-10
実験手法ELECTRON MICROSCOPY (3.11 Å)
主引用文献Target ssDNA activates the NADase activity of prokaryotic SPARTA immune system.
Nat.Chem.Biol., 20, 2024
8ISM
DownloadVisualize
BU of 8ism by Molmil
HSA-Pt compound complex
分子名称: 7-(2-azanyl-5-chloranyl-phenyl)-3$l^{3}-thia-5,6$l^{4}-diaza-2$l^{3}-platinatricyclo[6.4.0.0^{2,6}]dodeca-1(12),3,6,8,10-pentaen-4-amine, PALMITIC ACID, Serum albumin
著者Zhang, J.Z, Zhang, Z.L.
登録日2023-03-21
公開日2024-03-27
実験手法X-RAY DIFFRACTION (2.76 Å)
主引用文献HSA-Pt compound complex
To Be Published
2NWM
DownloadVisualize
BU of 2nwm by Molmil
Solution structure of the first SH3 domain of human Vinexin and its interaction with the peptides from Vinculin
分子名称: Vinexin
著者Zhang, J, Yao, B, Wu, J, Shi, Y.
登録日2006-11-15
公開日2007-04-24
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献Solution structure of the first SH3 domain of human vinexin and its interaction with vinculin peptides
Biochem.Biophys.Res.Commun., 357, 2007
3STA
DownloadVisualize
BU of 3sta by Molmil
Crystal structure of ClpP in tetradecameric form from Staphylococcus aureus
分子名称: ATP-dependent Clp protease proteolytic subunit
著者Zhang, J, Ye, F, Lan, L, Jiang, H, Luo, C, Yang, C.-G.
登録日2011-07-09
公開日2011-09-07
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.28 Å)
主引用文献Structural switching of Staphylococcus aureus Clp protease: a key to understanding protease dynamics
J.Biol.Chem., 286, 2011
3ST9
DownloadVisualize
BU of 3st9 by Molmil
Crystal structure of ClpP in heptameric form from Staphylococcus aureus
分子名称: ATP-dependent Clp protease proteolytic subunit, CALCIUM ION, GLYCEROL, ...
著者Zhang, J, Ye, F, Lan, L, Jiang, H, Luo, C, Yang, C.-G.
登録日2011-07-09
公開日2011-09-07
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.43 Å)
主引用文献Structural switching of Staphylococcus aureus Clp protease: a key to understanding protease dynamics
J.Biol.Chem., 286, 2011
8K1I
DownloadVisualize
BU of 8k1i by Molmil
Crystal structure of arabinose dehydrogenase from Candida auris
分子名称: NADP-dependent oxidoreductase domain-containing protein
著者Zhang, J, Bai, X, He, S.R, Zhao, Z.D.
登録日2023-07-11
公開日2023-08-30
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Crystal structure of arabinose dehydrogenase from Candida auris
To Be Published
5X5R
DownloadVisualize
BU of 5x5r by Molmil
Crystal structure of a hydrolase from Listeria innocua
分子名称: Lin2189 protein
著者Zhang, J, Zhou, J.
登録日2017-02-17
公開日2018-02-21
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.644 Å)
主引用文献Crystal structure of a hydrolase encoded by lin2189 from Listeria innocua
To Be Published
8K34
DownloadVisualize
BU of 8k34 by Molmil
Cryo-EM structure of SPARTA gRNA binary complex
分子名称: MAGNESIUM ION, Piwi domain-containing protein, RNA (5'-R(P*AP*AP*AP*CP*GP*GP*CP*UP*CP*UP*AP*AP*UP*CP*UP*AP*UP*UP*AP*GP*U)-3'), ...
著者Zhang, J.T, Jia, N.
登録日2023-07-14
公開日2024-01-17
最終更新日2024-04-10
実験手法ELECTRON MICROSCOPY (2.81 Å)
主引用文献Target ssDNA activates the NADase activity of prokaryotic SPARTA immune system.
Nat.Chem.Biol., 20, 2024
7Y85
DownloadVisualize
BU of 7y85 by Molmil
CryoEM structure of type III-E CRISPR Craspase gRAMP-crRNA in complex with TPR-CHAT protease bound to self RNA target
分子名称: CHAT domain protein, MAGNESIUM ION, RAMP superfamily protein, ...
著者Zhang, J.T, Cui, N, Huang, H.D, Jia, N.
登録日2022-06-22
公開日2022-12-14
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (2.73 Å)
主引用文献Structural basis for the non-self RNA-activated protease activity of the type III-E CRISPR nuclease-protease Craspase.
Nat Commun, 13, 2022
7Y81
DownloadVisualize
BU of 7y81 by Molmil
CryoEM structure of type III-E CRISPR Craspase gRAMP-crRNA complex bound to non-self RNA target
分子名称: MAGNESIUM ION, Non-self RNA target, RAMP superfamily protein, ...
著者Zhang, J.T, Cui, N, Huang, H.D, Jia, N.
登録日2022-06-22
公開日2022-12-14
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (2.54 Å)
主引用文献Structural basis for the non-self RNA-activated protease activity of the type III-E CRISPR nuclease-protease Craspase.
Nat Commun, 13, 2022
7Y80
DownloadVisualize
BU of 7y80 by Molmil
CryoEM structure of type III-E CRISPR Craspase gRAMP-crRNA binary complex
分子名称: MAGNESIUM ION, RAMP superfamily protein, ZINC ION, ...
著者Zhang, J.T, Cui, N, Huang, H.D, Jia, N.
登録日2022-06-22
公開日2022-12-14
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (2.71 Å)
主引用文献Structural basis for the non-self RNA-activated protease activity of the type III-E CRISPR nuclease-protease Craspase.
Nat Commun, 13, 2022
7Y84
DownloadVisualize
BU of 7y84 by Molmil
CryoEM structure of type III-E CRISPR Craspase gRAMP-crRNA in complex with TPR-CHAT protease
分子名称: CHAT domain protein, MAGNESIUM ION, RAMP superfamily protein, ...
著者Zhang, J.T, Cui, N, Huang, H.D, Jia, N.
登録日2022-06-22
公開日2022-12-14
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (2.61 Å)
主引用文献Structural basis for the non-self RNA-activated protease activity of the type III-E CRISPR nuclease-protease Craspase.
Nat Commun, 13, 2022
7Y82
DownloadVisualize
BU of 7y82 by Molmil
CryoEM structure of type III-E CRISPR Craspase gRAMP-crRNA complex bound to self RNA target
分子名称: MAGNESIUM ION, RAMP superfamily protein, Self RNA target, ...
著者Zhang, J.T, Cui, N, Huang, H.D, Jia, N.
登録日2022-06-22
公開日2022-12-14
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (2.83 Å)
主引用文献Structural basis for the non-self RNA-activated protease activity of the type III-E CRISPR nuclease-protease Craspase.
Nat Commun, 13, 2022
7Y83
DownloadVisualize
BU of 7y83 by Molmil
CryoEM structure of type III-E CRISPR Craspase gRAMP-crRNA in complex with TPR-CHAT protease bound to non-self RNA target
分子名称: CHAT domain protein, MAGNESIUM ION, RAMP superfamily protein, ...
著者Zhang, J.T, Cui, N, Huang, H.D, Jia, N.
登録日2022-06-22
公開日2022-12-14
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (2.93 Å)
主引用文献Structural basis for the non-self RNA-activated protease activity of the type III-E CRISPR nuclease-protease Craspase.
Nat Commun, 13, 2022
5X5M
DownloadVisualize
BU of 5x5m by Molmil
Crystal structure of a hydrolase encoded by lin2189 from Listeria innocua
分子名称: (+)-Yatakemycin, DIMETHYL SULFOXIDE, Lin2189 protein
著者Zhang, J.
登録日2017-02-16
公開日2017-12-06
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.211 Å)
主引用文献GyrI-like proteins catalyze cyclopropanoid hydrolysis to confer cellular protection
Nat Commun, 8, 2017
4LCK
DownloadVisualize
BU of 4lck by Molmil
Co-crystal structure of a T-box riboswitch stem I domain in complex with its cognate tRNA
分子名称: MAGNESIUM ION, Ribosomal protein YbxF, STRONTIUM ION, ...
著者Zhang, J, Ferre-D'Amare, A.R.
登録日2013-06-21
公開日2013-07-31
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Co-crystal structure of a T-box riboswitch stem I domain in complex with its cognate tRNA.
Nature, 500, 2013
7DGD
DownloadVisualize
BU of 7dgd by Molmil
apo state of class C GPCR
分子名称: Metabotropic glutamate receptor 1
著者Zhang, J.Y, Wu, L.J, Luo, F, Hua, T, Liu, Z.J.
登録日2020-11-11
公開日2021-09-22
実験手法ELECTRON MICROSCOPY (3.96 Å)
主引用文献Structural insights into the activation initiation of full-length mGlu1.
Protein Cell, 12, 2021
7DGE
DownloadVisualize
BU of 7dge by Molmil
intermediate state of class C GPCR
分子名称: (S)-2-AMINO-3-(3,5-DIOXO-[1,2,4]OXADIAZOLIDIN-2-YL)-PROPIONIC ACID, Metabotropic glutamate receptor 1, nanobody
著者Zhang, J.Y, Wu, L.J, Luo, F, Hua, T, Liu, Z.J.
登録日2020-11-11
公開日2021-09-22
実験手法ELECTRON MICROSCOPY (3.65 Å)
主引用文献Structural insights into the activation initiation of full-length mGlu1.
Protein Cell, 12, 2021
5H3V
DownloadVisualize
BU of 5h3v by Molmil
Crystal structure of a Type IV Secretion System Component CagX in Helicobacter pylori
分子名称: Cag8, DI(HYDROXYETHYL)ETHER, ISOPROPYL ALCOHOL
著者Zhang, J, Wu, Y, Zhao, Y, Sun, L, Keegan, R.M, Liu, Y, Isupov, M.N.
登録日2016-10-27
公開日2017-04-12
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Crystal structure of the type IV secretion system component CagX from Helicobacter pylori
Acta Crystallogr F Struct Biol Commun, 73, 2017
8IW5
DownloadVisualize
BU of 8iw5 by Molmil
Crystal structure of liprin-beta H2H3 dimer
分子名称: CALCIUM ION, Liprin-beta-1
著者Zhang, J, Chen, S, Wei, Z.
登録日2023-03-29
公開日2023-11-08
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献KANK1 shapes focal adhesions by orchestrating protein binding, mechanical force sensing, and phase separation.
Cell Rep, 42, 2023
8IW0
DownloadVisualize
BU of 8iw0 by Molmil
Crystal structure of the KANK1/liprin-beta1 complex
分子名称: Liprin-beta-1,KN motif and ankyrin repeat domain-containing protein 1
著者Zhang, J, Chen, S, Wei, Z, Yu, C.
登録日2023-03-29
公開日2023-11-08
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献KANK1 shapes focal adhesions by orchestrating protein binding, mechanical force sensing, and phase separation.
Cell Rep, 42, 2023
7DDE
DownloadVisualize
BU of 7dde by Molmil
Cryo-EM structure of the Ape4 and Nbr1 complex
分子名称: Aspartyl aminopeptidase 1,ZZ-type zinc finger-containing protein P35G2.11c,Maltose/maltodextrin-binding periplasmic protein, ZINC ION
著者Zhang, J, Ye, K.
登録日2020-10-28
公開日2021-07-14
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (2.26 Å)
主引用文献Molecular and structural mechanisms of ZZ domain-mediated cargo selection by Nbr1.
Embo J., 40, 2021
7DD9
DownloadVisualize
BU of 7dd9 by Molmil
Cryo-EM structure of the Ams1 and Nbr1 complex
分子名称: Alpha-mannosidase,ZZ-type zinc finger-containing protein P35G2.11c,Maltose/maltodextrin-binding periplasmic protein, ZINC ION
著者Zhang, J, Ye, K.
登録日2020-10-28
公開日2021-07-14
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (2.4 Å)
主引用文献Molecular and structural mechanisms of ZZ domain-mediated cargo selection by Nbr1.
Embo J., 40, 2021
6AR6
DownloadVisualize
BU of 6ar6 by Molmil
Clostridioides difficile toxinB with DLD-4 darpin
分子名称: DLD-4 darpin, Toxin B
著者Zhang, J, Jiang, M.
登録日2017-08-21
公開日2018-08-22
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (9 Å)
主引用文献Clostridioides difficile toxinB with DLD-4 darpin
To Be Published
5ZY9
DownloadVisualize
BU of 5zy9 by Molmil
Structural basis for a tRNA synthetase
分子名称: (1R,2R)-2-[(2S,4E,6E,8R,9S,11R,13S,15S,16S)-7-cyano-8,16-dihydroxy-9,11,13,15-tetramethyl-18-oxooxacyclooctadeca-4,6-dien-2-yl]cyclopentanecarboxylic acid, Threonyl-tRNA synthase, ZINC ION
著者Zhang, J.
登録日2018-05-23
公開日2019-06-12
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural basis for inhibition of translational functions on a tRNA synthetase
To Be Published

223166

件を2024-07-31に公開中

PDB statisticsPDBj update infoContact PDBjnumon