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PDB: 812 results

8HIF
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BU of 8hif by Molmil
One asymmetric unit of Singapore grouper iridovirus capsid
Descriptor: Major capsid protein, Penton protein (VP14), VP137, ...
Authors:Zhao, Z.N, Liu, C.C, Zhu, D.J, Qi, J.X, Zhang, X.Z, Gao, G.F.
Deposit date:2022-11-20
Release date:2023-04-19
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Near-atomic architecture of Singapore grouper iridovirus and implications for giant virus assembly.
Nat Commun, 14, 2023
4OV9
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BU of 4ov9 by Molmil
Structure of isopropylmalate synthase binding with alpha-isopropylmalate
Descriptor: (2S)-2-hydroxy-2-(propan-2-yl)butanedioic acid, ZINC ION, isopropylmalate synthase
Authors:Zhang, Z, Wu, J, Wang, C, Zhang, P.
Deposit date:2014-02-20
Release date:2014-08-20
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Subdomain II of alpha-isopropylmalate synthase is essential for activity: inferring a mechanism of feedback inhibition.
J.Biol.Chem., 289, 2014
8RM5
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BU of 8rm5 by Molmil
Cryo-EM structure of the cross-exon pre-B+5'ssLNG+ATPyS complex
Descriptor: 116 kDa U5 small nuclear ribonucleoprotein component, 5'SS oligo, NHP2-like protein 1, ...
Authors:Zhang, Z, Kumar, V, Dybkov, O, Will, C.L, Zhong, J, Ludwig, S, Urlaub, H, Kastner, B, Stark, H, Luehrmann, R.
Deposit date:2024-01-05
Release date:2024-05-22
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (6.9 Å)
Cite:Structural insights into the cross-exon to cross-intron spliceosome switch.
Nature, 630, 2024
1WA6
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BU of 1wa6 by Molmil
The structure of ACC oxidase
Descriptor: 1-AMINOCYCLOPROPANE-1-CARBOXYLATE OXIDASE 1, FE (II) ION, PHOSPHATE ION, ...
Authors:Zhang, Z, Ren, J.-S, Clifton, I.J, Schofield, C.J.
Deposit date:2004-10-25
Release date:2005-10-26
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Crystal Structure and Mechanistic Implications of 1-Aminocyclopropane-1-Carboxylic Acid Oxidase (the Ethyling Forming Enzyme)
Chem.Biol., 11, 2004
5W3X
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BU of 5w3x by Molmil
Crystal structure of PopP2 in complex with IP6, AcCoA and the WRKY domain of RRS1-R .
Descriptor: ACETYL COENZYME *A, Disease resistance protein RRS1, GLYCEROL, ...
Authors:Zhang, Z.M, Gao, L, Song, J.
Deposit date:2017-06-08
Release date:2017-08-09
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2 Å)
Cite:Mechanism of host substrate acetylation by a YopJ family effector.
Nat Plants, 3, 2017
5W40
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BU of 5w40 by Molmil
Crystal structure of PopP2 F318S in complex with IP6 and AcCoA
Descriptor: COENZYME A, INOSITOL HEXAKISPHOSPHATE, PopP2 protein
Authors:Zhang, Z.M, Gao, L, Song, J.
Deposit date:2017-06-08
Release date:2017-08-09
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.53 Å)
Cite:Mechanism of host substrate acetylation by a YopJ family effector.
Nat Plants, 3, 2017
5W3Y
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BU of 5w3y by Molmil
Crystal structure of PopP2 C321A in complex with IP6 and AcCoA
Descriptor: ACETYL COENZYME *A, INOSITOL HEXAKISPHOSPHATE, PopP2 protein
Authors:Zhang, Z.M, Gao, L, Song, J.
Deposit date:2017-06-08
Release date:2017-08-09
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Mechanism of host substrate acetylation by a YopJ family effector.
Nat Plants, 3, 2017
8ZMS
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BU of 8zms by Molmil
Acetylcholine-bound VAChT
Descriptor: ACETYLCHOLINE, Maltose/maltodextrin-binding periplasmic protein,Vesicular acetylcholine transporter,DARPinoff7
Authors:Zhang, Z, Zhang, Y, Dai, F, Zhang, Y.X, Lee, C.-H.
Deposit date:2024-05-23
Release date:2024-06-19
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Structural insights into VAChT neurotransmitter recognition and inhibition.
Cell Res., 2024
8ZMR
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BU of 8zmr by Molmil
Vesamicol-bound VAChT
Descriptor: Maltose/maltodextrin-binding periplasmic protein,Vesicular acetylcholine transporter,DARPinoff7, vesamicol
Authors:Zhang, Z, Zhang, Y, Dai, F, Zhang, Y.X, Lee, C.-H.
Deposit date:2024-05-23
Release date:2024-06-19
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Structural insights into VAChT neurotransmitter recognition and inhibition.
Cell Res., 2024
5KLP
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BU of 5klp by Molmil
Crystal structure of HopZ1a in complex with IP6
Descriptor: CITRIC ACID, INOSITOL HEXAKISPHOSPHATE, Orf34
Authors:Zhang, Z.-M, Song, J.
Deposit date:2016-06-24
Release date:2016-08-10
Last modified:2020-10-14
Method:X-RAY DIFFRACTION (2.002 Å)
Cite:Structure of a pathogen effector reveals the enzymatic mechanism of a novel acetyltransferase family.
Nat.Struct.Mol.Biol., 23, 2016
4FDD
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BU of 4fdd by Molmil
Crystal structure of KAP beta2-PY-NLS
Descriptor: RNA-binding protein FUS, Transportin-1
Authors:Zhang, Z.C, Chook, Y.M.
Deposit date:2012-05-28
Release date:2012-07-18
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural and energetic basis of ALS-causing mutations in the atypical proline-tyrosine nuclear localization signal of the Fused in Sarcoma protein (FUS).
Proc.Natl.Acad.Sci.USA, 109, 2012
8H5C
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BU of 8h5c by Molmil
Structure of SARS-CoV-2 Omicron BA.2.75 RBD in complex with human ACE2
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Zhao, Z.N, Bai, B, Liu, K.F, Qi, J.X, Gao, G.F.
Deposit date:2022-10-12
Release date:2023-07-19
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structural basis for receptor binding and broader interspecies receptor recognition of currently circulating Omicron sub-variants.
Nat Commun, 14, 2023
6A2I
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BU of 6a2i by Molmil
Architectural roles of Cren7 in folding crenarchaeal chromatin filament
Descriptor: Chromatin protein Cren7, DNA (5'-D(*CP*GP*TP*AP*GP*CP*TP*AP*AP*TP*TP*AP*GP*CP*TP*AP*CP*G)-3')
Authors:Zhang, Z.F, Zhao, M.H, Chen, Y.Y, Wang, L, Dong, Y.H, Gong, Y, Huang, L.
Deposit date:2018-06-11
Release date:2019-01-16
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Architectural roles of Cren7 in folding crenarchaeal chromatin filament.
Mol. Microbiol., 111, 2019
3KZB
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BU of 3kzb by Molmil
Crystal structure of xylulokinase from Chromobacterium violaceum
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Xylulokinase
Authors:Zhang, Z, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2009-12-08
Release date:2010-03-09
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.705 Å)
Cite:Crystal structure of xylulokinase from Chromobacterium violaceum
To be Published
3L0Q
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BU of 3l0q by Molmil
The crystal structure of xlylulose kinase from Yersinia pseudotuberculosis
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, D-XYLULOSE, GLYCEROL, ...
Authors:Zhang, Z, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2009-12-10
Release date:2010-01-05
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.61 Å)
Cite:The crystal structure of xylulose kinase from Yersinia pseudotuberculosis
To be Published
8H06
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BU of 8h06 by Molmil
Cryo-EM structure of SARS-CoV-2 Omicron BA.4/5 RBD in complex with human ACE2 (local refinement)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Zhao, Z.N, Xie, Y.F, Qi, J.X, Gao, G.F.
Deposit date:2022-09-28
Release date:2023-07-19
Last modified:2023-08-02
Method:ELECTRON MICROSCOPY (2.66 Å)
Cite:Structural basis for receptor binding and broader interspecies receptor recognition of currently circulating Omicron sub-variants.
Nat Commun, 14, 2023
8ZQE
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BU of 8zqe by Molmil
Cryo-EM structure of the GPR15L(C11)-bound GPR15 complex
Descriptor: GPR15, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
Authors:Zhang, Z.Y, Zheng, Y, Xu, F.
Deposit date:2024-06-02
Release date:2024-07-10
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Molecular recognition of the atypical chemokine-like peptide GPR15L by its cognate receptor GPR15.
Cell Discov, 10, 2024
3LIF
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BU of 3lif by Molmil
Crystal Structure of the extracellular domain of the putative histidine kinase rpHK1S-Z16
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, CITRIC ACID, Putative diguanylate cyclase (GGDEF) with PAS/PAC domain
Authors:Zhang, Z, Hendrickson, W.A.
Deposit date:2010-01-24
Release date:2010-05-05
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural characterization of the predominant family of histidine kinase sensor domains.
J.Mol.Biol., 400, 2010
8SGV
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BU of 8sgv by Molmil
human liver mitochondrial Catalase
Descriptor: Catalase, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, PROTOPORPHYRIN IX CONTAINING FE
Authors:Zhang, Z.
Deposit date:2023-04-13
Release date:2024-02-21
Method:ELECTRON MICROSCOPY (2.58 Å)
Cite:High-Resolution Structural Proteomics of Mitochondria Using the 'Build and Retrieve' Methodology.
Mol.Cell Proteomics, 22, 2023
8SKR
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BU of 8skr by Molmil
human liver mitochondrial Aspartate aminotransferase
Descriptor: Aspartate aminotransferase, mitochondrial, PYRIDOXAL-5'-PHOSPHATE
Authors:Zhang, Z, Tringides, M.
Deposit date:2023-04-20
Release date:2024-02-21
Method:ELECTRON MICROSCOPY (2.99 Å)
Cite:High-Resolution Structural Proteomics of Mitochondria Using the 'Build and Retrieve' Methodology.
Mol.Cell Proteomics, 22, 2023
8SHS
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BU of 8shs by Molmil
human liver mitochondrial Aldehyde dehydrogenase ALDH2
Descriptor: Aldehyde dehydrogenase, mitochondrial
Authors:Zhang, Z.
Deposit date:2023-04-14
Release date:2024-02-21
Method:ELECTRON MICROSCOPY (2.66 Å)
Cite:High-Resolution Structural Proteomics of Mitochondria Using the 'Build and Retrieve' Methodology.
Mol.Cell Proteomics, 22, 2023
8SKS
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BU of 8sks by Molmil
human liver mitochondrial Superoxide dismutase [Mn]
Descriptor: MANGANESE (II) ION, Superoxide dismutase [Mn], mitochondrial
Authors:Zhang, Z, Tringides, M.
Deposit date:2023-04-20
Release date:2024-02-21
Method:ELECTRON MICROSCOPY (2.91 Å)
Cite:High-Resolution Structural Proteomics of Mitochondria Using the 'Build and Retrieve' Methodology.
Mol.Cell Proteomics, 22, 2023
8SGP
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BU of 8sgp by Molmil
human liver mitochondrial Medium-chain specific acyl-CoA dehydrogenase
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, Medium-chain specific acyl-CoA dehydrogenase, mitochondrial
Authors:Zhang, Z.
Deposit date:2023-04-12
Release date:2024-02-21
Method:ELECTRON MICROSCOPY (2.69 Å)
Cite:High-Resolution Structural Proteomics of Mitochondria Using the 'Build and Retrieve' Methodology.
Mol.Cell Proteomics, 22, 2023
8SGR
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BU of 8sgr by Molmil
human liver mitochondrial Isovaleryl-CoA dehydrogenase
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, Isovaleryl-CoA dehydrogenase, mitochondrial
Authors:Zhang, Z.
Deposit date:2023-04-13
Release date:2024-02-21
Method:ELECTRON MICROSCOPY (2.84 Å)
Cite:High-Resolution Structural Proteomics of Mitochondria Using the 'Build and Retrieve' Methodology.
Mol.Cell Proteomics, 22, 2023
8SGS
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BU of 8sgs by Molmil
human liver mitochondrial Short-chain specific acyl-CoA dehydrogenase
Descriptor: COENZYME A, FLAVIN-ADENINE DINUCLEOTIDE, Short-chain specific acyl-CoA dehydrogenase, ...
Authors:Zhang, Z.
Deposit date:2023-04-13
Release date:2024-02-21
Method:ELECTRON MICROSCOPY (3.15 Å)
Cite:High-Resolution Structural Proteomics of Mitochondria Using the 'Build and Retrieve' Methodology.
Mol.Cell Proteomics, 22, 2023

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