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PDB: 165 件

6M0J
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Crystal structure of SARS-CoV-2 spike receptor-binding domain bound with ACE2
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Angiotensin-converting enzyme 2, CHLORIDE ION, ...
著者Wang, X, Lan, J, Ge, J, Yu, J, Shan, S.
登録日2020-02-21
公開日2020-03-18
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Structure of the SARS-CoV-2 spike receptor-binding domain bound to the ACE2 receptor.
Nature, 581, 2020
3B5X
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Crystal Structure of MsbA from Vibrio cholerae
分子名称: Lipid A export ATP-binding/permease protein msbA
著者Ward, A, Reyes, C.L, Yu, J, Roth, C.B, Chang, G.
登録日2007-10-26
公開日2007-12-04
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (5.5 Å)
主引用文献Flexibility in the ABC transporter MsbA: Alternating access with a twist.
Proc.Natl.Acad.Sci.Usa, 104, 2007
3B5Z
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Crystal Structure of MsbA from Salmonella typhimurium with ADP Vanadate
分子名称: ADENOSINE-5'-DIPHOSPHATE, Lipid A export ATP-binding/permease protein msbA, VANADATE ION
著者Ward, A, Reyes, C.L, Yu, J, Roth, C.B, Chang, G.
登録日2007-10-26
公開日2007-12-04
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (4.2 Å)
主引用文献Flexibility in the ABC transporter MsbA: Alternating access with a twist.
Proc.Natl.Acad.Sci.Usa, 104, 2007
3B5W
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Crystal Structure of Eschericia coli MsbA
分子名称: Lipid A export ATP-binding/permease protein msbA
著者Ward, A, Reyes, C.L, Yu, J, Roth, C.B, Chang, G.
登録日2007-10-26
公開日2007-12-04
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (5.3 Å)
主引用文献Flexibility in the ABC transporter MsbA: Alternating access with a twist.
Proc.Natl.Acad.Sci.Usa, 104, 2007
3B60
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Crystal Structure of MsbA from Salmonella typhimurium with AMPPNP, higher resolution form
分子名称: Lipid A export ATP-binding/permease protein msbA, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
著者Ward, A, Reyes, C.L, Yu, J, Roth, C.B, Chang, G.
登録日2007-10-26
公開日2007-12-04
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (3.7 Å)
主引用文献Flexibility in the ABC transporter MsbA: Alternating access with a twist.
Proc.Natl.Acad.Sci.Usa, 104, 2007
3B5Y
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Crystal Structure of MsbA from Salmonella typhimurium with AMPPNP
分子名称: Lipid A export ATP-binding/permease protein msbA, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
著者Ward, A, Reyes, C.L, Yu, J, Roth, C.B, Chang, G.
登録日2007-10-26
公開日2007-12-04
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (4.5 Å)
主引用文献Flexibility in the ABC transporter MsbA: Alternating access with a twist.
Proc.Natl.Acad.Sci.Usa, 104, 2007
7QE7
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High-resolution structure of the Anaphase-promoting complex/cyclosome (APC/C) bound to co-activator Cdh1
分子名称: Anaphase-promoting complex subunit 1, Anaphase-promoting complex subunit 10, Anaphase-promoting complex subunit 11, ...
著者Hoefler, A, Yu, J, Chang, L, Zhang, Z, Yang, J, Boland, A, Barford, D.
登録日2021-12-01
公開日2022-01-26
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献High-resolution structure of the Anaphase-promoting complex (APC/C) bound to co-activator Cdh1
To Be Published
5ZUE
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GTP-bound, double-stranded, curved FtsZ protofilament structure
分子名称: Cell division protein FtsZ, GUANOSINE-5'-TRIPHOSPHATE
著者Guan, F, Yu, J, Yu, J, Liu, Y, Li, Y, Feng, X.H, Huang, K.C, Chang, Z, Ye, S.
登録日2018-05-07
公開日2018-07-04
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Lateral interactions between protofilaments of the bacterial tubulin homolog FtsZ are essential for cell division
Elife, 7, 2018
4DSQ
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Crystal structure of peroxiredoxin Ahp1 from Saccharomyces cerevisiae in oxidized form
分子名称: Peroxiredoxin type-2
著者Lian, F.M, Yu, J, Ma, X.X, Yu, X.J, Chen, Y, Zhou, C.Z.
登録日2012-02-19
公開日2012-04-11
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural Snapshots of Yeast Alkyl Hydroperoxide Reductase Ahp1 Peroxiredoxin Reveal a Novel Two-cysteine Mechanism of Electron Transfer to Eliminate Reactive Oxygen Species
J.Biol.Chem., 287, 2012
4DSS
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Crystal structure of peroxiredoxin Ahp1 from Saccharomyces cerevisiae in complex with thioredoxin Trx2
分子名称: Peroxiredoxin type-2, Thioredoxin-2
著者Lian, F.M, Yu, J, Ma, X.X, Yu, X.J, Chen, Y, Zhou, C.Z.
登録日2012-02-19
公開日2012-04-11
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural Snapshots of Yeast Alkyl Hydroperoxide Reductase Ahp1 Peroxiredoxin Reveal a Novel Two-cysteine Mechanism of Electron Transfer to Eliminate Reactive Oxygen Species.
J.Biol.Chem., 287, 2012
4DSR
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Crystal structure of peroxiredoxin Ahp1 from Saccharomyces cerevisiae in reduced form
分子名称: Peroxiredoxin type-2
著者Lian, F.M, Yu, J, Ma, X.X, Yu, X.J, Chen, Y, Zhou, C.Z.
登録日2012-02-19
公開日2012-04-11
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.91 Å)
主引用文献Structural Snapshots of Yeast Alkyl Hydroperoxide Reductase Ahp1 Peroxiredoxin Reveal a Novel Two-cysteine Mechanism of Electron Transfer to Eliminate Reactive Oxygen Species.
J.Biol.Chem., 287, 2012
3GX8
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Structural and biochemical characterization of yeast monothiol glutaredoxin Grx5
分子名称: Monothiol glutaredoxin-5, mitochondrial, SULFATE ION
著者Wang, Y, He, Y.X, Yu, J, Xiong, Y, Chen, Y, Zhou, C.Z.
登録日2009-04-01
公開日2010-04-14
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.673 Å)
主引用文献Structural and biochemical characterization of yeast monothiol glutaredoxin Grx5
To be Published
2M80
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Solution structure of yeast dithiol glutaredoxin Grx8
分子名称: Glutaredoxin-8
著者Tang, Y, Zhang, J, Yu, J, Wu, J, Zhou, C.Z, Shi, Y.
登録日2013-05-02
公開日2014-05-07
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Structure-guided activity enhancement and catalytic mechanism of yeast grx8
Biochemistry, 53, 2014
5Y56
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Fc mutant (K392D/K409D/D399K)
分子名称: Immunoglobulin gamma-1 heavy chain, beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-alpha-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-beta-D-mannopyranose-(1-3)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[beta-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-alpha-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)-[beta-D-mannopyranose-(1-3)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
著者Ye, S, Xu, T, Yu, J, Wang, X, Xu, T, Jin, Q, Duan, J, Wu, J, Wu, H.
登録日2017-08-07
公開日2017-09-13
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.653 Å)
主引用文献A rational approach to enhancing antibody Fc homodimer formation for robust production of antibody mixture in a single cell line
J. Biol. Chem., 292, 2017
1R7Z
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NMR STRUCTURE OF THE R(GGAGGACAUUCCUCACGGGUGACCGUGGUCCUCC), DOMAIN IV STEM-LOOP B OF ENTEROVIRAL IRES WITH AUUCCU BULGE
分子名称: 34-MER
著者Du, Z, Ulyanov, N.B, Yu, J, James, T.L.
登録日2003-10-22
公開日2004-05-25
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献NMR Structures of Loop B RNAs from the Stem-Loop IV Domain of the Enterovirus Internal Ribosome Entry Site: A Single C to U Substitution Drastically Changes the Shape and Flexibility of RNA(,).
Biochemistry, 43, 2004
1TXS
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STEM-LOOP D OF THE CLOVERLEAF DOMAIN OF ENTEROVIRAL 5'UTR RNA
分子名称: Enteroviral 5'-UTR
著者Du, Z, Yu, J, Ulyanov, N.B, Andino, R, James, T.L.
登録日2004-07-06
公開日2004-10-05
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Solution Structure of a Consensus Stem-Loop D RNA Domain that Plays Important Roles in Regulating Translation and Replication in Enteroviruses and Rhinoviruses
Biochemistry, 43, 2004
5AXM
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Crystal structure of Thg1 like protein (TLP) with tRNA(Phe)
分子名称: MAGNESIUM ION, RNA (75-MER), tRNA(His)-5'-guanylyltransferase (Thg1) like protein
著者Kimura, S, Suzuki, T, Yu, J, Kato, K, Yao, M.
登録日2015-07-31
公開日2016-08-03
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.21 Å)
主引用文献Template-dependent nucleotide addition in the reverse (3'-5') direction by Thg1-like protein
Sci Adv, 2, 2016
5AXL
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Crystal structure of Thg1 like protein (TLP) with GTP
分子名称: GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, tRNA(His)-5'-guanylyltransferase (Thg1) like protein
著者Kimura, S, Suzuki, T, Yu, J, Kato, K, Yao, M.
登録日2015-07-31
公開日2016-08-03
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.998 Å)
主引用文献Template-dependent nucleotide addition in the reverse (3'-5') direction by Thg1-like protein
Sci Adv, 2, 2016
5AXK
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Crystal structure of Thg1 like protein (TLP)
分子名称: GLYCEROL, tRNA(His)-5'-guanylyltransferase (Thg1) like protein
著者Kimura, S, Suzuki, T, Yu, J, Kato, K, Yao, M.
登録日2015-07-31
公開日2016-08-03
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.29 Å)
主引用文献Template-dependent nucleotide addition in the reverse (3'-5') direction by Thg1-like protein
Sci Adv, 2, 2016
5AXN
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Crystal structure of Thg1 like protein (TLP) with tRNA(Phe) and GDPNP
分子名称: MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER, RNA (75-MER), ...
著者Kimura, S, Suzuki, T, Yu, J, Kato, K, Yao, M.
登録日2015-07-31
公開日2016-08-03
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.703 Å)
主引用文献Template-dependent nucleotide addition in the reverse (3'-5') direction by Thg1-like protein
Sci Adv, 2, 2016
1R7W
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NMR STRUCTURE OF THE R(GGAGGACAUCCCUCACGGGUGACCGUGGUCCUCC), DOMAIN IV STEM-LOOP B OF ENTEROVIRAL IRES WITH AUCCCU BULGE
分子名称: 34-MER
著者Du, Z, Ulyanov, N.B, Yu, J, James, T.L.
登録日2003-10-22
公開日2004-05-25
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献NMR Structures of Loop B RNAs from the Stem-Loop IV Domain of the Enterovirus Internal Ribosome Entry Site: A Single C to U Substitution Drastically Changes the Shape and Flexibility of RNA(,).
Biochemistry, 43, 2004
1ROQ
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Extending the Family of UNCG-like Tetraloop Motifs: NMR Structure of a CACG Tetraloop from Coxsackievirus B3
分子名称: 5'-R(*GP*GP*UP*AP*UP*CP*AP*CP*GP*GP*UP*AP*CP*C)-3'
著者Du, Z, Yu, J, Andino, R, James, T.L.
登録日2003-12-02
公開日2004-05-18
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Extending the Family of UNCG-like Tetraloop Motifs: NMR Structure of a CACG Tetraloop from Coxsackievirus B3
Biochemistry, 42, 2003
5Y4O
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Cryo-EM structure of MscS channel, YnaI
分子名称: Low conductance mechanosensitive channel YnaI
著者Zhang, Y, Yu, J.
登録日2017-08-04
公開日2019-03-20
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献A binding-block ion selective mechanism revealed by a Na/K selective channel.
Protein Cell, 9, 2018
3L9Y
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Crystal structures of holo and Cu-deficient Cu/ZnSOD from the silkworm Bombyx mori and the implications in Amyotrophic lateral sclerosis
分子名称: COPPER (II) ION, Superoxide dismutase [Cu-Zn], ZINC ION
著者Zhang, N.-N, He, Y.-X, Li, W.-F, Zhao, F, Yan, L.-F, Zhang, G.-Z, Teng, Y.-B, Yu, J, Chen, Y, Zhou, C.-Z.
登録日2010-01-06
公開日2010-03-23
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structures of holo and Cu-deficient Cu/Zn-SOD from the silkworm Bombyx mori and the implications in amyotrophic lateral sclerosis.
Proteins, 78, 2010
3L9E
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Crystal structures of holo and Cu-deficient Cu/ZnSOD from the silkworm Bombyx mori and the implications in Amyotrophic lateral sclerosis
分子名称: Superoxide dismutase [Cu-Zn], ZINC ION
著者Zhang, N.-N, He, Y.-X, Li, W.-F, Zhao, F, Yan, L.-F, Zhang, G.-Z, Teng, Y.-B, Yu, J, Chen, Y, Zhou, C.-Z.
登録日2010-01-05
公開日2010-03-31
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Crystal structures of holo and Cu-deficient Cu/Zn-SOD from the silkworm Bombyx mori and the implications in amyotrophic lateral sclerosis
Proteins, 78, 2010

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