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PDB: 15 件
1BYJ
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GENTAMICIN C1A A-SITE COMPLEX
分子名称: 2,6-diamino-2,3,4,6-tetradeoxy-alpha-D-erythro-hexopyranose, 3,5-DIAMINO-CYCLOHEXANOL, 3-deoxy-4-C-methyl-3-(methylamino)-beta-L-arabinopyranose, ...
著者Yoshizawa, S, Fourmy, D, Puglisi, J.D.
登録日1998-10-16
公開日1999-10-29
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献Structural origins of gentamicin antibiotic action.
EMBO J., 17, 1998
1WSU
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BU of 1wsu by Molmil
C-terminal domain of elongation factor selB complexed with SECIS RNA
分子名称: 5'-R(*GP*GP*CP*GP*UP*UP*GP*CP*CP*GP*GP*UP*CP*U*GP*GP*CP*AP*AP*CP*GP*CP*C)-3', Selenocysteine-specific elongation factor
著者Yoshizawa, S, Rasubala, L, Ose, T, Kohda, D, Fourmy, D, Maenaka, K.
登録日2004-11-11
公開日2005-01-25
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural basis for mRNA recognition by elongation factor SelB
Nat.Struct.Mol.Biol., 12, 2005
2GV3
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BU of 2gv3 by Molmil
Translocation of a tRNA with an extended anticodon through the ribosome
分子名称: 5'-R(*GP*GP*CP*CP*AP*GP*AP*CP*UP*CP*CP*CP*GP*AP*AP*UP*CP*UP*GP*GP*CP*C)-3'
著者Phelps, S.S, Gaudin, C, Yoshizawa, S, Benitez, C, Fourmy, D, Joseph, S.
登録日2006-05-02
公開日2006-08-08
最終更新日2022-03-09
実験手法SOLUTION NMR
主引用文献Translocation of a tRNA with an Extended Anticodon Through the Ribosome.
J.Mol.Biol., 360, 2006
2HNS
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Structure of the AAGU tetraloop
分子名称: 5'-R(*GP*GP*CP*GP*UP*GP*AP*UP*CP*AP*AP*GP*UP*GP*AP*UP*CP*GP*CP*GP*CP*C)-3'
著者Gaudin, C, Fourmy, F, Yoshizawa, S.
登録日2006-07-13
公開日2006-10-31
最終更新日2022-03-09
実験手法SOLUTION NMR
主引用文献Structure of an AAGU Tetraloop and its Contribution to Substrate Selection by yeast RNase III.
J.Mol.Biol., 363, 2006
1A3M
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BU of 1a3m by Molmil
PAROMOMYCIN BINDING INDUCES A LOCAL CONFORMATIONAL CHANGE IN THE A SITE OF 16S RRNA, NMR, 20 STRUCTURES
分子名称: 16S RRNA (5'-R(*GP*GP*CP*GP*UP*CP*AP*CP*AP*CP*CP*UP*UP*C)-3'), 16S RRNA (5'-R(*GP*GP*GP*UP*GP*AP*AP*GP*UP*CP*GP*CP*C)-3')
著者Fourmy, D, Yoshizawa, S, Puglisi, J.D.
登録日1998-01-22
公開日1998-04-29
最終更新日2022-02-16
実験手法SOLUTION NMR
主引用文献Paromomycin binding induces a local conformational change in the A-site of 16 S rRNA.
J.Mol.Biol., 277, 1998
2PLY
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BU of 2ply by Molmil
Structure of the mRNA binding fragment of elongation factor SelB in complex with SECIS RNA.
分子名称: CALCIUM ION, CHLORIDE ION, MAGNESIUM ION, ...
著者Soler, N, Fourmy, D, Yoshizawa, S.
登録日2007-04-20
公開日2007-11-06
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structural insight into a molecular switch in tandem winged-helix motifs from elongation factor SelB.
J.Mol.Biol., 370, 2007
2PJP
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Structure of the mRNA-binding domain of elongation factor SelB from E.coli in complex with SECIS RNA
分子名称: CALCIUM ION, CHLORIDE ION, MAGNESIUM ION, ...
著者Soler, N, Fourmy, D, Yoshizawa, S.
登録日2007-04-16
公開日2007-10-30
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural insight into a molecular switch in tandem winged-helix motifs from elongation factor SelB.
J.Mol.Biol., 370, 2007
1K6H
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BU of 1k6h by Molmil
Solution Structure of Conserved AGNN Tetraloops: Insights into Rnt1p RNA processing
分子名称: RNA (5'-R(P*GP*GP*CP*GP*UP*GP*UP*UP*CP*AP*GP*AP*AP*GP*AP*AP*CP*GP*CP*GP*CP*C)-3')
著者Lebars, I, Lamontagne, B, Yoshizawa, S, Abou Elela, S, Fourmy, D.
登録日2001-10-16
公開日2001-12-19
最終更新日2022-02-23
実験手法SOLUTION NMR
主引用文献Solution structure of conserved AGNN tetraloops: insights into Rnt1p RNA processing.
EMBO J., 20, 2001
1K6G
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Solution Structure of Conserved AGNN Tetraloops: Insights into Rnt1p RNA Processing
分子名称: RNA (5'-R(P*GP*GP*CP*GP*UP*CP*AP*UP*GP*AP*GP*UP*CP*CP*AP*UP*GP*GP*CP*GP*CP*C)-3')
著者Lebars, I, Lamontagne, B, Yoshizawa, S, Abou Elela, S, Fourmy, D.
登録日2001-10-16
公開日2001-12-19
最終更新日2022-02-23
実験手法SOLUTION NMR
主引用文献Solution structure of conserved AGNN tetraloops: insights into Rnt1p RNA processing.
EMBO J., 20, 2001
1MT4
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Structure of 23S ribosomal RNA hairpin 35
分子名称: 23S ribosomal Hairpin 35
著者Lebars, I, Yoshizawa, S, Stenholm, A.R, Guittet, E, Douthwaite, S, Fourmy, D.
登録日2002-09-20
公開日2003-01-14
最終更新日2022-02-23
実験手法SOLUTION NMR
主引用文献Structure of 23S rRNA hairpin 35 and its interaction with the tylosin-resistance methyltransferase RlmAII
Embo J., 22, 2003
2UWM
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BU of 2uwm by Molmil
C-TERMINAL DOMAIN(WH2-WH4) OF ELONGATION FACTOR SELB IN COMPLEX WITH SECIS RNA
分子名称: 5'-R(*GP*GP*CP*GP*UP*UP*GP*CP*CP*GP *GP*UP*CP*UP*GP*GP*CP*AP*AP*CP*GP*CP*C)-3', SELENOCYSTEINE-SPECIFIC ELONGATION FACTOR
著者Ose, T, Soler, N, Rasubala, L, Kuroki, K, Kohda, D, Fourmy, D, Yoshizawa, S, Maenaka, K.
登録日2007-03-22
公開日2007-05-08
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.31 Å)
主引用文献Structural Basis for Dynamic Interdomain Movement and RNA Recognition of the Selenocysteine-Specific Elongation Factor Selb.
Structure, 15, 2007
1MFK
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BU of 1mfk by Molmil
Structure of Prokaryotic SECIS mRNA Hairpin
分子名称: 5'-R(P*GP*GP*CP*GP*GP*UP*UP*GP*CP*AP*GP*GP*UP*CP*UP*GP*CP*AP*CP*CP*GP*CP*C)-3'
著者Fourmy, D, Guittet, E, Yoshizawa, S.
登録日2002-08-12
公開日2002-11-13
最終更新日2022-02-23
実験手法SOLUTION NMR
主引用文献Structure of Prokaryotic SECIS mRNA Hairpin and its Interaction with Elongation Factor SELB
J.Mol.Biol., 324, 2002
1ZC5
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BU of 1zc5 by Molmil
Structure of the RNA signal essential for translational frameshifting in HIV-1
分子名称: HIV-1 frameshift RNA signal
著者Gaudin, C, Mazauric, M.H, Traikia, M, Guittet, E, Yoshizawa, S, Fourmy, D.
登録日2005-04-11
公開日2005-06-07
最終更新日2022-03-02
実験手法SOLUTION NMR
主引用文献Structure of the RNA Signal Essential for Translational Frameshifting in HIV-1
J.Mol.Biol., 349, 2005
3X3B
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BU of 3x3b by Molmil
Crystal structure of the light-driven sodium pump KR2 in acidic state
分子名称: DI(HYDROXYETHYL)ETHER, OLEIC ACID, RETINAL, ...
著者Kato, H.E, Inoue, K, Abe-Yoshizumi, R, Kato, Y, Ono, H, Konno, M, Ishizuka, T, Hoque, M.R, Hososhima, S, Kunitomo, H, Ito, J, Yoshizawa, S, Yamashita, K, Takemoto, M, Nishizawa, T, Taniguchi, R, Kogure, K, Maturana, A.D, Iino, Y, Yawo, H, Ishitani, R, Kandori, H, Nureki, O.
登録日2015-01-18
公開日2015-04-08
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural basis for Na(+) transport mechanism by a light-driven Na(+) pump
Nature, 521, 2015
3X3C
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Crystal structure of the light-driven sodium pump KR2 in neutral state
分子名称: OLEIC ACID, RETINAL, Sodium pumping rhodopsin
著者Kato, H.E, Inoue, K, Abe-Yoshizumi, R, Kato, Y, Ono, H, Konno, M, Ishizuka, T, Hoque, M.R, Hososhima, S, Kunitomo, H, Ito, J, Yoshizawa, S, Yamashita, K, Takemoto, M, Nishizawa, T, Taniguchi, R, Kogure, K, Maturana, A.D, Iino, Y, Yawo, H, Ishitani, R, Kandori, H, Nureki, O.
登録日2015-01-18
公開日2015-04-08
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural basis for Na(+) transport mechanism by a light-driven Na(+) pump
Nature, 521, 2015

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