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PDB: 298 results

8J5R
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BU of 8j5r by Molmil
Cryo-EM structure of Mycobacterium tuberculosis OppABCD in the resting state
Descriptor: IRON/SULFUR CLUSTER, Putative peptide transport permease protein Rv1282c, Putative peptide transport permease protein Rv1283c, ...
Authors:Yang, X, Hu, T, Zhang, B, Rao, Z.
Deposit date:2023-04-24
Release date:2024-04-03
Last modified:2024-07-31
Method:ELECTRON MICROSCOPY (3.28 Å)
Cite:An oligopeptide permease, OppABCD, requires an iron-sulfur cluster domain for functionality.
Nat.Struct.Mol.Biol., 31, 2024
8J5S
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BU of 8j5s by Molmil
Cryo-EM structure of Mycobacterium tuberculosis OppABCD in the pre-catalytic intermediate state
Descriptor: Endogenous oligopeptide, IRON/SULFUR CLUSTER, MAGNESIUM ION, ...
Authors:Yang, X, Hu, T, Zhang, B, Rao, Z.
Deposit date:2023-04-24
Release date:2024-04-03
Last modified:2024-07-31
Method:ELECTRON MICROSCOPY (3 Å)
Cite:An oligopeptide permease, OppABCD, requires an iron-sulfur cluster domain for functionality.
Nat.Struct.Mol.Biol., 31, 2024
8J5T
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BU of 8j5t by Molmil
Cryo-EM structure of Mycobacterium tuberculosis OppABCD in the catalytic intermediate state
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, IRON/SULFUR CLUSTER, MAGNESIUM ION, ...
Authors:Yang, X, Hu, T, Zhang, B, Rao, Z.
Deposit date:2023-04-24
Release date:2024-04-03
Last modified:2024-07-31
Method:ELECTRON MICROSCOPY (2.98 Å)
Cite:An oligopeptide permease, OppABCD, requires an iron-sulfur cluster domain for functionality.
Nat.Struct.Mol.Biol., 31, 2024
8J5Q
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BU of 8j5q by Molmil
Cryo-EM structure of Mycobacterium tuberculosis OppABCD in the pre-translocation state
Descriptor: Endogenous oligopeptide, IRON/SULFUR CLUSTER, Putative peptide transport permease protein Rv1282c, ...
Authors:Yang, X, Hu, T, Zhang, B, Rao, Z.
Deposit date:2023-04-24
Release date:2024-04-03
Last modified:2024-07-31
Method:ELECTRON MICROSCOPY (3.25 Å)
Cite:An oligopeptide permease, OppABCD, requires an iron-sulfur cluster domain for functionality.
Nat.Struct.Mol.Biol., 31, 2024
2BMJ
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BU of 2bmj by Molmil
GTPase like domain of Centaurin Gamma 1 (Human)
Descriptor: CENTAURIN GAMMA 1
Authors:Yang, X, Elkins, J.M, Soundararajan, M, Arrowsmith, C, Edwards, A, Sundstrom, M, Doyle, D.A, Structural Genomics Consortium (SGC)
Deposit date:2005-03-14
Release date:2005-04-12
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The Centaurin Gamma-1 Gtpase-Like Domain Functions as an Ntpase.
Biochem.J., 401, 2007
2BQ0
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BU of 2bq0 by Molmil
14-3-3 Protein Beta (Human)
Descriptor: 14-3-3 BETA/ALPHA
Authors:Yang, X, Elkins, J.M, Fedorov, O, Longman, E.J, Sobott, L, Ball, L.J, Sundstrom, M, Arrowsmith, C, Edwards, A, Doyle, D.A.
Deposit date:2005-04-26
Release date:2005-05-06
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural Basis for Protein-Protein Interactions in the 14-3-3 Protein Family.
Proc.Natl.Acad.Sci.USA, 103, 2006
2BR9
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BU of 2br9 by Molmil
14-3-3 Protein Epsilon (Human) Complexed to Peptide
Descriptor: 14-3-3 PROTEIN EPSILON, CONSENSUS PEPTIDE FOR 14-3-3 PROTEINS
Authors:Yang, X, Elkins, J.M, Soundararajan, M, Fedorov, O, Sundstrom, M, Edwards, A, Arrowsmith, C, Doyle, D.A.
Deposit date:2005-05-03
Release date:2005-05-12
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structural Basis for Protein-Protein Interactions in the 14-3-3 Protein Family.
Proc.Natl.Acad.Sci.USA, 103, 2006
6KF5
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BU of 6kf5 by Molmil
Microbial Hormone-sensitive lipase E53 mutant I256L
Descriptor: (4-nitrophenyl) hexanoate, 1,2-ETHANEDIOL, GLYCEROL, ...
Authors:Yang, X, Li, Z.Y, Li, J, Xu, X.W.
Deposit date:2019-07-06
Release date:2020-07-08
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Microbial Hormone-sensitive lipase E53 mutant I256L
To Be Published
1JBS
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BU of 1jbs by Molmil
Crystal structure of ribotoxin restrictocin and a 29-mer SRD RNA analog
Descriptor: 29-mer sarcin/ricin domain RNA analog, POTASSIUM ION, restrictocin
Authors:Yang, X, Gerczei, T, Glover, L, Correll, C.C.
Deposit date:2001-06-06
Release date:2001-10-26
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Crystal structures of restrictocin-inhibitor complexes with implications for RNA recognition and base flipping.
Nat.Struct.Biol., 8, 2001
1JBR
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Crystal Structure of the Ribotoxin Restrictocin and a 31-mer SRD RNA Inhibitor
Descriptor: 31-mer SRD RNA analog, 5'-R(*GP*CP*GP*CP*UP*CP*CP*UP*CP*AP*GP*UP*AP*CP*GP*AP*GP*(A23))-3', 5'-R(*GP*GP*AP*AP*CP*CP*GP*GP*AP*GP*CP*GP*C)-3', ...
Authors:Yang, X, Gerczei, T, Glover, L, Correll, C.C.
Deposit date:2001-06-06
Release date:2001-10-26
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Crystal structures of restrictocin-inhibitor complexes with implications for RNA recognition and base flipping.
Nat.Struct.Biol., 8, 2001
1LI4
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BU of 1li4 by Molmil
Human S-adenosylhomocysteine hydrolase complexed with neplanocin
Descriptor: 3-(6-AMINO-PURIN-9-YL)-5-HYDROXYMETHYL-CYCLOPENTANE-1,2-DIOL, ISOPROPYL ALCOHOL, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
Authors:Yang, X, Hu, Y, Yin, D.H, Turner, M.A, Wang, M, Borchardt, R.T, Howell, P.L, Kuczera, K, Schowen, R.L.
Deposit date:2002-04-17
Release date:2003-05-20
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Catalytic strategy of S-adenosyl-L-homocysteine hydrolase: Transition-state stabilization and the avoidance of abortive reactions
Biochemistry, 42, 2003
1JBT
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BU of 1jbt by Molmil
CRYSTAL STRUCTURE OF RIBOTOXIN RESTRICTOCIN COMPLEXED WITH A 29-MER SARCIN/RICIN DOMAIN RNA ANALOG
Descriptor: 29-MER SARCIN/RICIN DOMAIN RNA ANALOG, POTASSIUM ION, RESTRICTOCIN
Authors:Yang, X, Gerczei, T, Glover, L, Correll, C.C.
Deposit date:2001-06-06
Release date:2001-10-26
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structures of restrictocin-inhibitor complexes with implications for RNA recognition and base flipping.
Nat.Struct.Biol., 8, 2001
3LRA
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BU of 3lra by Molmil
Structural Basis for Assembling a Human Tripartite Complex Dlg1-MPP7-Mals3
Descriptor: Disks large homolog 1, MAGUK p55 subfamily member 7, Protein lin-7 homolog C
Authors:Yang, X, Xie, X, Shen, Y, Long, J.
Deposit date:2010-02-10
Release date:2010-11-17
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Structural basis for tandem L27 domain-mediated polymerization
Faseb J., 24, 2010
3NHQ
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BU of 3nhq by Molmil
The dark Pfr structure of the photosensory core module of P. aeruginosa Bacteriophytochrome
Descriptor: BILIVERDINE IX ALPHA, Bacteriophytochrome
Authors:Yang, X, Ren, Z, Kuk, J, Moffat, K.
Deposit date:2010-06-14
Release date:2011-11-30
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Temperature-scan cryocrystallography reveals reaction intermediates in bacteriophytochrome.
Nature, 479, 2011
4R70
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BU of 4r70 by Molmil
Crystal structure of bacteriophytochrome RpBphP3 from photosynthetic bacterium R. palustris
Descriptor: BILIVERDINE IX ALPHA, Bacteriophytochrome (Light-regulated signal transduction histidine kinase), PhyB2
Authors:Yang, X, Kuk, J, Moffat, K.
Deposit date:2014-08-26
Release date:2015-07-15
Last modified:2015-08-05
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Light Signaling Mechanism of Two Tandem Bacteriophytochromes.
Structure, 23, 2015
4R6L
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BU of 4r6l by Molmil
Crystal structure of bacteriophytochrome RpBphP2 from photosynthetic bacterium R. palustris
Descriptor: BILIVERDINE IX ALPHA, Bacteriophytochrome (Light-regulated signal transduction histidine kinase), PhyB1
Authors:Yang, X, Stojkovic, E, Ozarowski, W, Kuk, J, Davydova, E, Moffat, K.
Deposit date:2014-08-25
Release date:2015-07-22
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3.395 Å)
Cite:Light Signaling Mechanism of Two Tandem Bacteriophytochromes.
Structure, 23, 2015
4S21
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BU of 4s21 by Molmil
Crystal structure of the photosensory core module of bacteriophytochrome RPA3015 from R. palustris
Descriptor: BILIVERDINE IX ALPHA, Bacteriophytochrome (Light-regulated signal transduction histidine kinase), PhyB1
Authors:Yang, X, Stojkovi, E.A, Ozarowski, W.B, Moffat, K.
Deposit date:2015-01-17
Release date:2015-07-15
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3.25 Å)
Cite:Light Signaling Mechanism of Two Tandem Bacteriophytochromes.
Structure, 23, 2015
3G6O
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BU of 3g6o by Molmil
Crystal structure of P. aeruginosa bacteriophytochrome PaBphP photosensory core domain mutant Q188L
Descriptor: BILIVERDINE IX ALPHA, Bacteriophytochrome
Authors:Yang, X, Kuk, J, Moffat, K.
Deposit date:2009-02-07
Release date:2009-09-22
Last modified:2021-10-20
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Conformational differences between the Pfr and Pr states in Pseudomonas aeruginosa bacteriophytochrome
Proc.Natl.Acad.Sci.USA, 106, 2009
3C2W
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BU of 3c2w by Molmil
Crystal structure of the photosensory core domain of P. aeruginosa bacteriophytochrome PaBphP in the Pfr state
Descriptor: BILIVERDINE IX ALPHA, Bacteriophytochrome
Authors:Yang, X, Kuk, J, Moffat, K.
Deposit date:2008-01-25
Release date:2008-09-23
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Crystal structure of Pseudomonas aeruginosa bacteriophytochrome: photoconversion and signal transduction.
Proc.Natl.Acad.Sci.USA, 105, 2008
6UVB
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BU of 6uvb by Molmil
Crystal structure of far-red-light absorbing cyanobacteriochrome at 100K
Descriptor: Multi-sensor signal transduction histidine kinase, PHYCOCYANOBILIN
Authors:Yang, X, Ren, Z, Bandara, S.
Deposit date:2019-11-01
Release date:2020-11-04
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal structure of a far-red-sensing cyanobacteriochrome reveals an atypical bilin conformation and spectral tuning mechanism.
Proc.Natl.Acad.Sci.USA, 118, 2021
7X76
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BU of 7x76 by Molmil
Cryo-EM structure of Streptomyces coelicolor RNAP-promoter open complex with two Zur dimers
Descriptor: DNA (84-MER), DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ...
Authors:Yang, X, Zheng, J.
Deposit date:2022-03-09
Release date:2022-08-03
Last modified:2022-08-24
Method:ELECTRON MICROSCOPY (3.67 Å)
Cite:Structural basis of Streptomyces transcription activation by zinc uptake regulator.
Nucleic Acids Res., 50, 2022
7X74
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BU of 7x74 by Molmil
Cryo-EM structure of Streptomyces coelicolor transcription initial complex with two Zur dimers.
Descriptor: DNA (84-MER), DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ...
Authors:Yang, X, Zheng, J.
Deposit date:2022-03-09
Release date:2022-08-03
Last modified:2024-06-26
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Structural basis of Streptomyces transcription activation by zinc uptake regulator.
Nucleic Acids Res., 50, 2022
7X75
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BU of 7x75 by Molmil
Cryo-EM structure of Streptomyces coelicolor RNAP-promoter open complex with three Zur dimers
Descriptor: DNA (84-MER), DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ...
Authors:Yang, X, Zheng, J.
Deposit date:2022-03-09
Release date:2022-08-03
Last modified:2024-06-26
Method:ELECTRON MICROSCOPY (3.45 Å)
Cite:Structural basis of Streptomyces transcription activation by zinc uptake regulator.
Nucleic Acids Res., 50, 2022
5B0D
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BU of 5b0d by Molmil
Polyketide cyclase OAC from Cannabis sativa, Y27W mutant
Descriptor: Olivetolic acid cyclase
Authors:Yang, X, Matsui, T, Mori, T, Abe, I, Morita, H.
Deposit date:2015-10-28
Release date:2016-01-27
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.801 Å)
Cite:Structural basis for olivetolic acid formation by a polyketide cyclase from Cannabis sativa
Febs J., 283, 2016
5B0C
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BU of 5b0c by Molmil
Polyketide cyclase OAC from Cannabis sativa, Y27F mutant
Descriptor: Olivetolic acid cyclase
Authors:Yang, X, Matsui, T, Mori, T, Abe, I, Morita, H.
Deposit date:2015-10-28
Release date:2016-01-27
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.602 Å)
Cite:Structural basis for olivetolic acid formation by a polyketide cyclase from Cannabis sativa
Febs J., 283, 2016

225946

數據於2024-10-09公開中

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