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PDB: 289 件

3IBR
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BU of 3ibr by Molmil
Crystal Structure of P. aeruginosa Bacteriophytochrome Photosensory Core Module Mutant Q188L in the Mixed Pr/Pfr State
分子名称: BILIVERDINE IX ALPHA, Bacteriophytochrome
著者Yang, X, Kuk, J, Moffat, K.
登録日2009-07-16
公開日2009-09-22
最終更新日2021-10-13
実験手法X-RAY DIFFRACTION (2.97 Å)
主引用文献Conformational differences between the Pfr and Pr states in Pseudomonas aeruginosa bacteriophytochrome.
Proc.Natl.Acad.Sci.USA, 106, 2009
8J5U
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BU of 8j5u by Molmil
Crystal structure of Mycobacterium tuberculosis OppA complexed with an endogenous oligopeptide
分子名称: Endogenous oligopeptide, Uncharacterized protein Rv1280c
著者Yang, X, Hu, T, Zhang, B, Rao, Z.
登録日2023-04-24
公開日2024-04-03
最終更新日2024-04-10
実験手法X-RAY DIFFRACTION (1.98 Å)
主引用文献An oligopeptide permease, OppABCD, requires an iron-sulfur cluster domain for functionality.
Nat.Struct.Mol.Biol., 2024
8J5R
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BU of 8j5r by Molmil
Cryo-EM structure of Mycobacterium tuberculosis OppABCD in the resting state
分子名称: IRON/SULFUR CLUSTER, Putative peptide transport permease protein Rv1282c, Putative peptide transport permease protein Rv1283c, ...
著者Yang, X, Hu, T, Zhang, B, Rao, Z.
登録日2023-04-24
公開日2024-04-03
最終更新日2024-04-10
実験手法ELECTRON MICROSCOPY (3.28 Å)
主引用文献An oligopeptide permease, OppABCD, requires an iron-sulfur cluster domain for functionality.
Nat.Struct.Mol.Biol., 2024
8J5S
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BU of 8j5s by Molmil
Cryo-EM structure of Mycobacterium tuberculosis OppABCD in the pre-catalytic intermediate state
分子名称: Endogenous oligopeptide, IRON/SULFUR CLUSTER, MAGNESIUM ION, ...
著者Yang, X, Hu, T, Zhang, B, Rao, Z.
登録日2023-04-24
公開日2024-04-03
最終更新日2024-04-10
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献An oligopeptide permease, OppABCD, requires an iron-sulfur cluster domain for functionality.
Nat.Struct.Mol.Biol., 2024
8J5T
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BU of 8j5t by Molmil
Cryo-EM structure of Mycobacterium tuberculosis OppABCD in the catalytic intermediate state
分子名称: ADENOSINE-5'-TRIPHOSPHATE, IRON/SULFUR CLUSTER, MAGNESIUM ION, ...
著者Yang, X, Hu, T, Zhang, B, Rao, Z.
登録日2023-04-24
公開日2024-04-03
最終更新日2024-04-10
実験手法ELECTRON MICROSCOPY (2.98 Å)
主引用文献An oligopeptide permease, OppABCD, requires an iron-sulfur cluster domain for functionality.
Nat.Struct.Mol.Biol., 2024
8J5Q
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BU of 8j5q by Molmil
Cryo-EM structure of Mycobacterium tuberculosis OppABCD in the pre-translocation state
分子名称: Endogenous oligopeptide, IRON/SULFUR CLUSTER, Putative peptide transport permease protein Rv1282c, ...
著者Yang, X, Hu, T, Zhang, B, Rao, Z.
登録日2023-04-24
公開日2024-04-03
最終更新日2024-04-10
実験手法ELECTRON MICROSCOPY (3.25 Å)
主引用文献An oligopeptide permease, OppABCD, requires an iron-sulfur cluster domain for functionality.
Nat.Struct.Mol.Biol., 2024
4R70
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BU of 4r70 by Molmil
Crystal structure of bacteriophytochrome RpBphP3 from photosynthetic bacterium R. palustris
分子名称: BILIVERDINE IX ALPHA, Bacteriophytochrome (Light-regulated signal transduction histidine kinase), PhyB2
著者Yang, X, Kuk, J, Moffat, K.
登録日2014-08-26
公開日2015-07-15
最終更新日2015-08-05
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献Light Signaling Mechanism of Two Tandem Bacteriophytochromes.
Structure, 23, 2015
4R6L
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BU of 4r6l by Molmil
Crystal structure of bacteriophytochrome RpBphP2 from photosynthetic bacterium R. palustris
分子名称: BILIVERDINE IX ALPHA, Bacteriophytochrome (Light-regulated signal transduction histidine kinase), PhyB1
著者Yang, X, Stojkovic, E, Ozarowski, W, Kuk, J, Davydova, E, Moffat, K.
登録日2014-08-25
公開日2015-07-22
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (3.395 Å)
主引用文献Light Signaling Mechanism of Two Tandem Bacteriophytochromes.
Structure, 23, 2015
4S21
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BU of 4s21 by Molmil
Crystal structure of the photosensory core module of bacteriophytochrome RPA3015 from R. palustris
分子名称: BILIVERDINE IX ALPHA, Bacteriophytochrome (Light-regulated signal transduction histidine kinase), PhyB1
著者Yang, X, Stojkovi, E.A, Ozarowski, W.B, Moffat, K.
登録日2015-01-17
公開日2015-07-15
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (3.25 Å)
主引用文献Light Signaling Mechanism of Two Tandem Bacteriophytochromes.
Structure, 23, 2015
8CX4
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BU of 8cx4 by Molmil
TCR-antigen complex AS8.4-YEIH-HLA*B27
分子名称: AS8.4a, AS8.4b, Beta-2-microglobulin, ...
著者Yang, X, Jude, K.M, Garcia, K.C.
登録日2022-05-19
公開日2022-12-07
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Autoimmunity-associated T cell receptors recognize HLA-B*27-bound peptides.
Nature, 612, 2022
5TEZ
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BU of 5tez by Molmil
TCR F50 recgonizing M1-HLA-A2
分子名称: Beta-2-microglobulin, GLY-ILE-LEU-GLY-PHE-VAL-PHE-THR-LEU, HLA class I histocompatibility antigen, ...
著者Yang, X, Mariuzza, R.A.
登録日2016-09-23
公開日2017-09-27
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structural basis for clonal diversity of the human T-cell response to a dominant influenza virus epitope.
J. Biol. Chem., 292, 2017
3NOU
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BU of 3nou by Molmil
Light-induced intermediate structure L3 of P. aeruginosa bacteriophytochrome
分子名称: BILIVERDINE IX ALPHA, Bacteriophytochrome
著者Yang, X, Ren, Z, Moffat, K.
登録日2010-06-25
公開日2012-11-28
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Temperature-scan cryocrystallography reveals reaction intermediates in bacteriophytochrome.
Nature, 479, 2011
3NOP
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BU of 3nop by Molmil
Light-induced intermediate structure L1 of Pseudomonas aeruginosa bacteriophytochrome
分子名称: BILIVERDINE IX ALPHA, Bacteriophytochrome
著者Yang, X, Ren, Z, Moffat, K.
登録日2010-06-25
公開日2012-11-07
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Temperature-scan cryocrystallography reveals reaction intermediates in bacteriophytochrome.
Nature, 479, 2011
3NOT
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BU of 3not by Molmil
Light-induced intermediate structure L2 of P. aeruginosa bacteriophytochrome
分子名称: BILIVERDINE IX ALPHA, Bacteriophytochrome
著者Yang, X, Ren, Z, Moffat, K.
登録日2010-06-25
公開日2012-11-28
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Temperature-scan cryocrystallography reveals reaction intermediates in bacteriophytochrome.
Nature, 479, 2011
4NC4
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BU of 4nc4 by Molmil
Crystal structure of photoreceptor AtUVR8 mutant W285F and light-induced structural changes at 120K
分子名称: MAGNESIUM ION, Ultraviolet-B receptor UVR8
著者Yang, X, Zeng, X, Zhao, K.-H, Ren, Z.
登録日2013-10-23
公開日2016-10-26
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Dynamic Crystallography Reveals Early Signalling Events in Ultraviolet Photoreceptor UVR8.
Nat Plants, 1, 2015
4NBM
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BU of 4nbm by Molmil
Crystal structure of UVB photoreceptor UVR8 and light-induced structural changes at 180K
分子名称: MAGNESIUM ION, Ultraviolet-B receptor UVR8
著者Yang, X, Zeng, X, Zhao, K.-H, Ren, Z.
登録日2013-10-23
公開日2016-10-26
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.61 Å)
主引用文献Dynamic Crystallography Reveals Early Signalling Events in Ultraviolet Photoreceptor UVR8.
Nat Plants, 1, 2015
8F71
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BU of 8f71 by Molmil
Crystal structure of the histidine kinase domain of bacteriophytochrome RpBphP2
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Histidine kinase, MAGNESIUM ION
著者Yang, X, Kumarapperuma, I, Tom, I.
登録日2022-11-17
公開日2023-11-22
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (3.19 Å)
主引用文献Mode of autophosphorylation in bacteriophytochromes RpBphP2 and RpBphP3.
Photochem Photobiol Sci, 22, 2023
4NAA
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BU of 4naa by Molmil
Crystal structure of UVB photoreceptor UVR8 from Arabidopsis thaliana and UV-induced structural changes at 120K
分子名称: MAGNESIUM ION, Ultraviolet-B receptor UVR8
著者Yang, X, Zeng, X, Ren, Z, Zhao, K.H.
登録日2013-10-22
公開日2016-10-26
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.67 Å)
主引用文献Dynamic Crystallography Reveals Early Signalling Events in Ultraviolet Photoreceptor UVR8.
Nat Plants, 1, 2015
7TR4
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BU of 7tr4 by Molmil
MA2-MART1-HLAA0201
分子名称: Beta-2-microglobulin, GLYCEROL, HLA-A*02:01, ...
著者Yang, X, Jude, K.M, Garcia, K.C.
登録日2022-01-27
公開日2022-11-23
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Facile repurposing of peptide-MHC-restricted antibodies for cancer immunotherapy.
Nat.Biotechnol., 41, 2023
7MCH
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BU of 7mch by Molmil
Crystal structure of a single-chain E/F type bilin lyase-isomerase MpeQ in space group C2221
分子名称: bilin lyase-isomerase
著者Yang, X, Kumarapperuma, I.
登録日2021-04-02
公開日2022-08-24
実験手法X-RAY DIFFRACTION (2.95 Å)
主引用文献Crystal structure and molecular mechanism of an E/F type bilin lyase-isomerase.
Structure, 30, 2022
5EUO
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BU of 5euo by Molmil
PF6-M1-HLA-A2
分子名称: Beta-2-microglobulin, HLA class I histocompatibility antigen, A-2 alpha chain, ...
著者Yang, X.
登録日2015-11-18
公開日2016-11-23
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure of PF6-M1-HLA-A2 complex
To Be Published
2IS9
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BU of 2is9 by Molmil
Structure of yeast DCN-1
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CHLORIDE ION, Defective in cullin neddylation protein 1, ...
著者Yang, X, Zhou, J, Sun, L, Wei, Z, Gao, J, Gong, W, Xu, R.M, Rao, Z, Liu, Y.
登録日2006-10-16
公開日2007-06-26
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.92 Å)
主引用文献Structural basis for the function of DCN-1 in protein Neddylation.
J.Biol.Chem., 282, 2007
2OOL
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BU of 2ool by Molmil
Crystal structure of the chromophore-binding domain of an unusual bacteriophytochrome RpBphP3 from R. palustris
分子名称: 3-[2-[(Z)-[3-(2-carboxyethyl)-5-[(Z)-(4-ethenyl-3-methyl-5-oxidanylidene-pyrrol-2-ylidene)methyl]-4-methyl-pyrrol-1-ium -2-ylidene]methyl]-5-[(Z)-[(3E)-3-ethylidene-4-methyl-5-oxidanylidene-pyrrolidin-2-ylidene]methyl]-4-methyl-1H-pyrrol-3- yl]propanoic acid, Sensor protein
著者Yang, X, Stojkovic, E.A, Kuk, J, Moffat, K.
登録日2007-01-25
公開日2007-07-10
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure of the chromophore binding domain of an unusual bacteriophytochrome, RpBphP3, reveals residues that modulate photoconversion.
Proc.Natl.Acad.Sci.Usa, 104, 2007
2N9G
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BU of 2n9g by Molmil
Solution structure of the bromodomain of Trypanosoma brucei Bromodomain Factor 2(BDF2)
分子名称: Putative uncharacterized protein
著者Yang, X.
登録日2015-11-23
公開日2016-11-23
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Solution structure of the bromodomain of Trypanosoma brucei Bromodomain Factor 2(BDF2)
To be Published
7CIP
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BU of 7cip by Molmil
Microbial Hormone-sensitive lipase E53 wild type
分子名称: (4-nitrophenyl) hexanoate, 1,2-ETHANEDIOL, 1,4-DIETHYLENE DIOXIDE, ...
著者Yang, X, Li, Z, Xu, X, Li, J.
登録日2020-07-08
公開日2021-07-14
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.752 Å)
主引用文献Microbial Hormone-sensitive lipase E53 wild type
To Be Published

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件を2024-07-17に公開中

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