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PDB: 289 results

4ZYL
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BU of 4zyl by Molmil
Crystal structure of response regulator RPA3017 in red light signaling of R. palustris
Descriptor: RphyB protein
Authors:Yang, X, Moffat, K.
Deposit date:2015-05-21
Release date:2015-10-14
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure of the response regulator RPA3017 involved in red-light signaling in Rhodopseudomonas palustris.
Acta Crystallogr F Struct Biol Commun, 71, 2015
7N2O
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BU of 7n2o by Molmil
AS4.2-YEIH-HLA*B27
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Beta-2-microglobulin, GLYCEROL, ...
Authors:Yang, X, Jude, K.M, Garcia, K.C.
Deposit date:2021-05-29
Release date:2022-12-07
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Autoimmunity-associated T cell receptors recognize HLA-B*27-bound peptides.
Nature, 612, 2022
7N2Q
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BU of 7n2q by Molmil
AS4.3-YEIH-HLA*B27
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, AS4.3 T cell receptor alpha chain, AS4.3 T cell receptor beta chain, ...
Authors:Yang, X, Jude, K.M, Garcia, K.C.
Deposit date:2021-05-29
Release date:2022-12-07
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Autoimmunity-associated T cell receptors recognize HLA-B*27-bound peptides.
Nature, 612, 2022
7N2S
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BU of 7n2s by Molmil
AS3.1-PRPF3-HLA*B27
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Beta-2-microglobulin, GLYCEROL, ...
Authors:Yang, X, Jude, K.M, Garcia, K.C.
Deposit date:2021-05-29
Release date:2022-12-07
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.37 Å)
Cite:Autoimmunity-associated T cell receptors recognize HLA-B*27-bound peptides.
Nature, 612, 2022
7N2R
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BU of 7n2r by Molmil
AS4.3-PRPF3-HLA*B27
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, AS4.3 T cell receptor alpha chain, ...
Authors:Yang, X, Jude, K.M, Garcia, K.C.
Deposit date:2021-05-29
Release date:2022-12-07
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:Autoimmunity-associated T cell receptors recognize HLA-B*27-bound peptides.
Nature, 612, 2022
7N2N
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BU of 7n2n by Molmil
TCR-antigen complex AS4.2-PRPF3-HLA*B27
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Beta-2-microglobulin, GLYCEROL, ...
Authors:Yang, X, Jude, K.M, Garcia, K.C.
Deposit date:2021-05-29
Release date:2022-12-07
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Autoimmunity-associated T cell receptors recognize HLA-B*27-bound peptides.
Nature, 612, 2022
7N2P
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BU of 7n2p by Molmil
AS4.3-RNASEH2b-HLA*B27
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, AS4.3 T cell receptor alpha chain, AS4.3 T cell receptor beta chain, ...
Authors:Yang, X, Jude, K.M, Garcia, K.C.
Deposit date:2021-05-29
Release date:2022-12-07
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Autoimmunity-associated T cell receptors recognize HLA-B*27-bound peptides.
Nature, 612, 2022
9C9Y
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BU of 9c9y by Molmil
Human TOP3B-TDRD3 core complex in DNA pre-cleavage state
Descriptor: DNA (5'-D(P*AP*CP*TP*AP*AP*AP*AP*T)-3'), DNA topoisomerase 3-beta-1, MANGANESE (II) ION, ...
Authors:Yang, X, Chen, X, Yang, W, Pommier, Y.
Deposit date:2024-06-16
Release date:2024-07-17
Method:ELECTRON MICROSCOPY (3.35 Å)
Cite:Structural Insights into human Topoisomerase 3-beta DNA and RNA catalytic cycles and topo-gate dynamics
To Be Published
9CA0
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BU of 9ca0 by Molmil
Human TOP3B-TDRD3 core complex in DNA pre-cleavage state
Descriptor: DNA (5'-D(*AP*TP*T)-3'), DNA (5'-D(P*TP*AP*CP*TP*AP*AP*A)-3'), DNA topoisomerase 3-beta-1, ...
Authors:Yang, X, Chen, X, Yang, W, Pommier, Y.
Deposit date:2024-06-16
Release date:2024-07-17
Method:ELECTRON MICROSCOPY (3.48 Å)
Cite:Structural Insights into human Topoisomerase 3-beta DNA and RNA catalytic cycles and topo-gate dynamics
To Be Published
9CA1
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BU of 9ca1 by Molmil
Human TOP3B-TDRD3 core complex in DNA religation state
Descriptor: DNA (5'-D(*AP*TP*T)-3'), DNA (5'-D(P*TP*AP*CP*TP*AP*AP*A)-3'), DNA topoisomerase 3-beta-1, ...
Authors:Yang, X, Chen, X, Yang, W, Pommier, Y.
Deposit date:2024-06-16
Release date:2024-07-17
Method:ELECTRON MICROSCOPY (3.26 Å)
Cite:Structural Insights into human Topoisomerase 3-beta DNA and RNA catalytic cycles and topo-gate dynamics
To Be Published
6U9E
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BU of 6u9e by Molmil
Structure of PdpA-VgrG Complex, Lidless
Descriptor: PdpA, VgrG
Authors:Yang, X, Clemens, D.L, Lee, B.-Y, Cui, Y, Zhou, Z.H, Horwitz, M.A.
Deposit date:2019-09-08
Release date:2019-10-23
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (4.21 Å)
Cite:Atomic Structure of the Francisella T6SS Central Spike Reveals a Unique alpha-Helical Lid and a Putative Cargo.
Structure, 27, 2019
6U9G
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BU of 6u9g by Molmil
Structure of Francisella PdpA-VgrG Complex, half-lidded
Descriptor: PdpA, VgrG
Authors:Yang, X, Clemens, D.L, Lee, B.-Y, Cui, Y, Zhou, Z.H, Horwitz, M.A.
Deposit date:2019-09-08
Release date:2019-10-23
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.98 Å)
Cite:Atomic Structure of the Francisella T6SS Central Spike Reveals a Unique alpha-Helical Lid and a Putative Cargo.
Structure, 27, 2019
6U9F
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BU of 6u9f by Molmil
Structure of Francisella PdpA-VgrG Complex, Lidded
Descriptor: PdpA, VgrG
Authors:Yang, X, Clemens, D.L, Lee, B.-Y, Cui, Y.X, Horwitz, M.A, Zhou, Z.H.
Deposit date:2019-09-08
Release date:2019-10-23
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (4.35 Å)
Cite:Atomic Structure of the Francisella T6SS Central Spike Reveals a Unique alpha-Helical Lid and a Putative Cargo.
Structure, 27, 2019
3GXA
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BU of 3gxa by Molmil
Crystal structure of GNA1946
Descriptor: METHIONINE, Outer membrane lipoprotein GNA1946, SULFATE ION
Authors:Yang, X, Shen, Y.
Deposit date:2009-04-02
Release date:2009-10-13
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Crystal structure of lipoprotein GNA1946 from Neisseria meningitidis
J.Struct.Biol., 168, 2009
3IR1
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BU of 3ir1 by Molmil
Crystal Structure of Lipoprotein GNA1946 from Neisseria meningitidis
Descriptor: METHIONINE, Outer membrane lipoprotein GNA1946, SULFATE ION
Authors:Yang, X, Wu, Z, Wang, X, Shen, Y.
Deposit date:2009-08-21
Release date:2009-10-13
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Crystal structure of lipoprotein GNA1946 from Neisseria meningitidis
J.Struct.Biol., 168, 2009
6LH4
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BU of 6lh4 by Molmil
Crystal structural of MacroD1-ADPr complex
Descriptor: ADP-ribose glycohydrolase MACROD1, [(2R,3S,4R,5R)-5-(6-AMINOPURIN-9-YL)-3,4-DIHYDROXY-OXOLAN-2-YL]METHYL [HYDROXY-[[(2R,3S,4R,5S)-3,4,5-TRIHYDROXYOXOLAN-2-YL]METHOXY]PHOSPHORYL] HYDROGEN PHOSPHATE
Authors:Yang, X, Ma, Y, Li, Y.
Deposit date:2019-12-06
Release date:2020-12-09
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.999 Å)
Cite:Molecular basis for the MacroD1-mediated hydrolysis of ADP-ribosylation.
DNA Repair (Amst), 94, 2020
1CX5
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BU of 1cx5 by Molmil
ANTISENSE DNA/RNA HYBRID CONTAINING MODIFIED BACKBONE
Descriptor: 5'-D(*CP*GP*CP*GP*TP*T*(MMT)P*TP*GP*CP*GP*C), 5'-R(*GP*CP*GP*CP*AP*AP*AP*AP*CP*GP*CP*G)
Authors:Yang, X, Han, X, Cross, C, Sanghvi, Y, Gao, X.
Deposit date:1999-08-28
Release date:1999-09-14
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:NMR structure of an antisense DNA.RNA hybrid duplex containing a 3'-CH(2)N(CH(3))-O-5' or an MMI backbone linker.
Biochemistry, 38, 1999
3DJN
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BU of 3djn by Molmil
Crystal structure of mouse TIS21
Descriptor: Protein BTG2
Authors:Yang, X, Morita, M, Wang, H, Suzuki, T, Bartlam, M, Yamamoto, T.
Deposit date:2008-06-24
Release date:2008-11-11
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structures of human BTG2 and mouse TIS21 involved in suppression of CAF1 deadenylase activity
Nucleic Acids Res., 36, 2008
3DJU
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BU of 3dju by Molmil
Crystal structure of human BTG2
Descriptor: Protein BTG2
Authors:Yang, X, Morita, M, Wang, H, Suzuki, T, Bartlam, M, Yamamoto, T.
Deposit date:2008-06-24
Release date:2008-11-11
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.26 Å)
Cite:Crystal structures of human BTG2 and mouse TIS21 involved in suppression of CAF1 deadenylase activity
Nucleic Acids Res., 36, 2008
4YN7
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BU of 4yn7 by Molmil
Non-oxidized YfiR
Descriptor: SULFATE ION, YfiR
Authors:Yang, X, Jiang, T.
Deposit date:2015-03-09
Release date:2015-04-22
Last modified:2015-05-20
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structures of YfiR from Pseudomonas aeruginosa in two redox states
Biochem.Biophys.Res.Commun., 461, 2015
2BMJ
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BU of 2bmj by Molmil
GTPase like domain of Centaurin Gamma 1 (Human)
Descriptor: CENTAURIN GAMMA 1
Authors:Yang, X, Elkins, J.M, Soundararajan, M, Arrowsmith, C, Edwards, A, Sundstrom, M, Doyle, D.A, Structural Genomics Consortium (SGC)
Deposit date:2005-03-14
Release date:2005-04-12
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The Centaurin Gamma-1 Gtpase-Like Domain Functions as an Ntpase.
Biochem.J., 401, 2007
2BQ0
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BU of 2bq0 by Molmil
14-3-3 Protein Beta (Human)
Descriptor: 14-3-3 BETA/ALPHA
Authors:Yang, X, Elkins, J.M, Fedorov, O, Longman, E.J, Sobott, L, Ball, L.J, Sundstrom, M, Arrowsmith, C, Edwards, A, Doyle, D.A.
Deposit date:2005-04-26
Release date:2005-05-06
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural Basis for Protein-Protein Interactions in the 14-3-3 Protein Family.
Proc.Natl.Acad.Sci.USA, 103, 2006
2BR9
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BU of 2br9 by Molmil
14-3-3 Protein Epsilon (Human) Complexed to Peptide
Descriptor: 14-3-3 PROTEIN EPSILON, CONSENSUS PEPTIDE FOR 14-3-3 PROTEINS
Authors:Yang, X, Elkins, J.M, Soundararajan, M, Fedorov, O, Sundstrom, M, Edwards, A, Arrowsmith, C, Doyle, D.A.
Deposit date:2005-05-03
Release date:2005-05-12
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structural Basis for Protein-Protein Interactions in the 14-3-3 Protein Family.
Proc.Natl.Acad.Sci.USA, 103, 2006
1JBT
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BU of 1jbt by Molmil
CRYSTAL STRUCTURE OF RIBOTOXIN RESTRICTOCIN COMPLEXED WITH A 29-MER SARCIN/RICIN DOMAIN RNA ANALOG
Descriptor: 29-MER SARCIN/RICIN DOMAIN RNA ANALOG, POTASSIUM ION, RESTRICTOCIN
Authors:Yang, X, Gerczei, T, Glover, L, Correll, C.C.
Deposit date:2001-06-06
Release date:2001-10-26
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structures of restrictocin-inhibitor complexes with implications for RNA recognition and base flipping.
Nat.Struct.Biol., 8, 2001
1JBR
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BU of 1jbr by Molmil
Crystal Structure of the Ribotoxin Restrictocin and a 31-mer SRD RNA Inhibitor
Descriptor: 31-mer SRD RNA analog, 5'-R(*GP*CP*GP*CP*UP*CP*CP*UP*CP*AP*GP*UP*AP*CP*GP*AP*GP*(A23))-3', 5'-R(*GP*GP*AP*AP*CP*CP*GP*GP*AP*GP*CP*GP*C)-3', ...
Authors:Yang, X, Gerczei, T, Glover, L, Correll, C.C.
Deposit date:2001-06-06
Release date:2001-10-26
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Crystal structures of restrictocin-inhibitor complexes with implications for RNA recognition and base flipping.
Nat.Struct.Biol., 8, 2001

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