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PDB: 80 results

8X42
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BU of 8x42 by Molmil
Complex structure of AtHPPD with YH20195
Descriptor: 3-(5-chloranylpyridin-3-yl)-6-(1,3-dimethyl-5-oxidanyl-pyrazol-4-yl)carbonyl-1,5-dimethyl-quinazoline-2,4-dione, 4-hydroxyphenylpyruvate dioxygenase, COBALT (II) ION
Authors:Yang, G.-F, Lin, H.-Y, Dong, J.
Deposit date:2023-11-14
Release date:2024-11-20
Method:X-RAY DIFFRACTION (2.097 Å)
Cite:Complex structure of AtHPPD with YH20195
To Be Published
8X5C
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BU of 8x5c by Molmil
Complex structure of AtHPPD with YH20540
Descriptor: 4-hydroxyphenylpyruvate dioxygenase, COBALT (II) ION, ~{N}-(1-methyl-1,2,3,4-tetrazol-5-yl)-3-propylsulfanyl-5-(trifluoromethyl)-[1,2,4]triazolo[4,3-a]pyridine-8-carboxamide
Authors:Yang, G.-F, Lin, H.-Y, Dong, J.
Deposit date:2023-11-16
Release date:2024-11-20
Method:X-RAY DIFFRACTION (1.788 Å)
Cite:Complex structure of AtHPPD with YH20540
To Be Published
8X68
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BU of 8x68 by Molmil
Complex structure of AtHPPD with YH21002
Descriptor: 3-(4-fluorophenyl)-1,6-dimethyl-7-(2-oxidanyl-6-oxidanylidene-cyclohexen-1-yl)carbonyl-quinazoline-2,4-dione, 4-hydroxyphenylpyruvate dioxygenase, COBALT (II) ION
Authors:Yang, G.-F, Lin, H.-Y, Dong, J.
Deposit date:2023-11-20
Release date:2024-11-20
Method:X-RAY DIFFRACTION (1.895 Å)
Cite:Complex structure of AtHPPD with YH21002
To Be Published
8X69
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BU of 8x69 by Molmil
Complex structure of AtHPPD with YH23010
Descriptor: 4-(2-fluoranylethyl)-1,6-dimethyl-7-(2-oxidanyl-6-oxidanylidene-cyclohexen-1-yl)carbonyl-3~{H}-1,4-benzodiazepine-2,5-dione, 4-hydroxyphenylpyruvate dioxygenase, COBALT (II) ION
Authors:Yang, G.-F, Lin, H.-Y, Dong, J.
Deposit date:2023-11-20
Release date:2024-11-20
Method:X-RAY DIFFRACTION (1.796 Å)
Cite:Complex structure of AtHPPD with YH23010
To Be Published
8X6A
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BU of 8x6a by Molmil
Complex structure of AtHPPD with Y18992
Descriptor: 2-[[4-[2-(4-methylphenyl)-2-oxidanylidene-ethyl]-3-oxidanylidene-1,4-benzothiazin-6-yl]-oxidanyl-methylidene]cyclohexane-1,3-dione, 4-hydroxyphenylpyruvate dioxygenase, COBALT (II) ION
Authors:Yang, G.-F, Lin, H.-Y, Dong, J.
Deposit date:2023-11-20
Release date:2024-11-20
Method:X-RAY DIFFRACTION (1.48 Å)
Cite:Complex structure of AtHPPD with Y18992
To Be Published
8XC3
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BU of 8xc3 by Molmil
Crystal structure of ZmHSL1A-MBQ complex
Descriptor: 1,5-dimethyl-3-(2-methylphenyl)-6-(2-oxidanyl-6-oxidanylidene-cyclohexen-1-yl)carbonyl-quinazoline-2,4-dione, 2-OXOGLUTARIC ACID, 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein, ...
Authors:Yang, G.-F, Lin, H.-Y, Dong, J.
Deposit date:2023-12-07
Release date:2024-10-02
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:An artificially evolved gene for herbicide-resistant rice breeding.
Proc.Natl.Acad.Sci.USA, 121, 2024
8HOW
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BU of 8how by Molmil
Crystal structure of AtHPPD-Y191052 complex
Descriptor: 1,5-dimethyl-6-(2-oxidanyl-6-oxidanylidene-cyclohexen-1-yl)carbonyl-3-(2-phenylethyl)quinazoline-2,4-dione, 4-hydroxyphenylpyruvate dioxygenase, COBALT (II) ION
Authors:Yang, G.-F, Lin, H.-Y, Dong, J.
Deposit date:2022-12-11
Release date:2023-01-25
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:Discovery of Subnanomolar Inhibitors of 4-Hydroxyphenylpyruvate Dioxygenase via Structure-Based Rational Design.
J.Agric.Food Chem., 71, 2023
8WI6
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BU of 8wi6 by Molmil
Crystal structure of AtHPPD-ZSM824 complex
Descriptor: 4-hydroxyphenylpyruvate dioxygenase, COBALT (II) ION, N-(1-methyl-1,2,3,4-tetrazol-5-yl)-1-pentyl-pyrrolo[2,3-b]pyridine-4-carboxamide
Authors:Yang, G.-F, Lin, H.-Y, Dong, J.
Deposit date:2023-09-24
Release date:2024-09-25
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.916 Å)
Cite:Crystal structure of AtHPPD-ZSM824 complex
To Be Published
8WHP
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BU of 8whp by Molmil
Crystal structure of AtHPPD-YH201042 complex
Descriptor: 4-hydroxyphenylpyruvate dioxygenase, 6-(1,3-dimethyl-5-oxidanyl-pyrazol-4-yl)carbonyl-3-(2-ethoxyethyl)-5-methyl-2-(trifluoromethyl)quinazolin-4-one, COBALT (II) ION
Authors:Yang, G.-F, Lin, H.-Y, Dong, J.
Deposit date:2023-09-23
Release date:2024-09-25
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.919 Å)
Cite:Crystal structure of AtHPPD-YH201042 complex
To Be Published
8WHO
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BU of 8who by Molmil
Crystal structure of AtHPPD-YH20541 complex
Descriptor: 3-(ethylsulfanylmethyl)-~{N}-(5-methyl-1,3,4-oxadiazol-2-yl)-5-(trifluoromethyl)-[1,2,4]triazolo[4,3-a]pyridine-8-carboxamide, 4-hydroxyphenylpyruvate dioxygenase, COBALT (II) ION
Authors:Yang, G.-F, Lin, H.-Y, Dong, J.
Deposit date:2023-09-23
Release date:2024-09-25
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.892 Å)
Cite:Crystal structure of AtHPPD-YH20541 complex
To Be Published
8WHQ
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BU of 8whq by Molmil
Crystal structure of AtHPPD-YH21398 complex
Descriptor: 1,8-dimethyl-6-(2-oxidanyl-6-oxidanylidene-cyclohexen-1-yl)carbonyl-3-(phenylmethyl)quinazoline-2,4-dione, 4-hydroxyphenylpyruvate dioxygenase, COBALT (II) ION
Authors:Yang, G.-F, Lin, H.-Y, Dong, J.
Deposit date:2023-09-23
Release date:2024-09-25
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.695 Å)
Cite:Crystal structure of AtHPPD-YH21398 complex
To Be Published
7VO8
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BU of 7vo8 by Molmil
Structure of AtHPPD complexed with LSY-1
Descriptor: 4-hydroxyphenylpyruvate dioxygenase, COBALT (II) ION, N-[6-[[9-(dimethylamino)-12H-benzo[a]phenoxazin-5-yl]amino]hexyl]-4-(2-oxidanyl-6-oxidanylidene-cyclohexen-1-yl)carbonyl-3-[oxidanyl(oxidanylidene)-$l^4-azanyl]benzamide
Authors:Yang, G.-F, Dong, J.
Deposit date:2021-10-12
Release date:2022-09-21
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:In vivo diagnostics of abiotic plant stress responses via in situ real-time fluorescence imaging
Plant Physiol., 190, 2022
7WJ8
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BU of 7wj8 by Molmil
Complex structure of AtHPPD-PyQ1
Descriptor: 2-pyren-1-yloxyethyl 2-[1,5-dimethyl-2,4-bis(oxidanylidene)-6-(2-oxidanyl-6-oxidanylidene-cyclohexen-1-yl)carbonyl-quinazolin-3-yl]ethanoate, 4-hydroxyphenylpyruvate dioxygenase, COBALT (II) ION
Authors:Yang, G.-F, Lin, H.-Y, Dong, J.
Deposit date:2022-01-05
Release date:2022-09-21
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.805 Å)
Cite:Design of an HPPD fluorescent probe and visualization of plant responses to abiotic stress
Adv Agrochem, 2022
7WJJ
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BU of 7wjj by Molmil
Complex structure of AtHPPD-PyQ2
Descriptor: 2-[1,5-dimethyl-2,4-bis(oxidanylidene)-6-(2-oxidanyl-6-oxidanylidene-cyclohexen-1-yl)carbonyl-quinazolin-3-yl]-N-(2-pyren-1-yloxyethyl)ethanamide, 4-hydroxyphenylpyruvate dioxygenase, COBALT (II) ION
Authors:Yang, G.-F, Lin, H.-Y, Dong, J.
Deposit date:2022-01-06
Release date:2022-09-21
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.603 Å)
Cite:Design of an HPPD fluorescent probe and visualization of plant responses to abiotic stress
Adv Agrochem, 2022
8WQM
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BU of 8wqm by Molmil
Complex structure of AtHPPD with Atovaquone
Descriptor: 2-[trans-4-(4-chlorophenyl)cyclohexyl]-3-hydroxynaphthalene-1,4-dione, 4-hydroxyphenylpyruvate dioxygenase, COBALT (II) ION
Authors:Yang, G.-F, Lin, H.-Y, Dong, J.
Deposit date:2023-10-11
Release date:2024-03-13
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.796 Å)
Cite:Complex structure of AtHPPD with Atovaquone
To Be Published
8WPC
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BU of 8wpc by Molmil
Complex structure of AtHPPD with LB553
Descriptor: (2R)-3-[2,4-bis(chloranyl)-3-methyl-phenyl]carbonyl-1-cyclopropyl-2-methyl-4-oxidanyl-2H-pyrrol-5-one, 4-hydroxyphenylpyruvate dioxygenase, COBALT (II) ION
Authors:Yang, G.-F, Lin, H.-Y, Dong, J.
Deposit date:2023-10-09
Release date:2024-10-09
Method:X-RAY DIFFRACTION (1.797 Å)
Cite:Complex structure of AtHPPD with LB553
To Be Published
8WJZ
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BU of 8wjz by Molmil
Crystal structure of AtHPPD-F419Y+Y13161 complex
Descriptor: 3-(2,6-dimethylphenyl)-1-methyl-6-(2-oxidanyl-6-oxidanylidene-cyclohexen-1-yl)carbonyl-quinazoline-2,4-dione, 4-hydroxyphenylpyruvate dioxygenase, COBALT (II) ION
Authors:Yang, G.-F, Lin, H.-Y, Dong, J.
Deposit date:2023-09-26
Release date:2024-10-02
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.606 Å)
Cite:Crystal structure of AtHPPD-F419Y+Y13161 complex
To Be Published
8WK2
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BU of 8wk2 by Molmil
Crystal structure of AtHPPD-F419Y+Y13287 complex
Descriptor: 1,5-dimethyl-3-(2-methylphenyl)-6-(2-oxidanyl-6-oxidanylidene-cyclohexen-1-yl)carbonyl-quinazoline-2,4-dione, 4-hydroxyphenylpyruvate dioxygenase, COBALT (II) ION
Authors:Yang, G.-F, Lin, H.-Y, Dong, J.
Deposit date:2023-09-26
Release date:2024-10-02
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.806 Å)
Cite:Crystal structure of AtHPPD-F419Y+Y13287 complex
To Be Published
8WPD
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BU of 8wpd by Molmil
Complex structure of AtHPPD with YH20009
Descriptor: 4-hydroxyphenylpyruvate dioxygenase, 6-chloranyl-3-(2,5-dimethylpyrazol-3-yl)-1-methyl-7-(2-oxidanyl-6-oxidanylidene-cyclohexen-1-yl)carbonyl-quinazoline-2,4-dione, COBALT (II) ION
Authors:Yang, G.-F, Lin, H.-Y, Dong, J.
Deposit date:2023-10-09
Release date:2024-10-09
Method:X-RAY DIFFRACTION (1.799 Å)
Cite:Complex structure of AtHPPD with YH20009
To Be Published
8WL0
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BU of 8wl0 by Molmil
Crystal structure of AtHPPD+Y19542 complex
Descriptor: 4-hydroxyphenylpyruvate dioxygenase, 6-(1,3-dimethyl-5-oxidanyl-pyrazol-4-yl)carbonyl-3-[(4-fluorophenyl)methyl]-5-methyl-1,2,3-benzotriazin-4-one, COBALT (II) ION
Authors:Yang, G.-F, Lin, H.-Y, Dong, J.
Deposit date:2023-09-29
Release date:2024-10-02
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.789 Å)
Cite:Crystal structure of AtHPPD-+Y19542 complex
To Be Published
8GWD
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BU of 8gwd by Molmil
Crystal structure of AtHPPD-Y18734 complex
Descriptor: 1,5-dimethyl-6-(2-oxidanyl-6-oxidanylidene-cyclohexen-1-yl)carbonyl-3-[(1S)-1-phenylethyl]quinazoline-2,4-dione, 4-hydroxyphenylpyruvate dioxygenase, COBALT (II) ION
Authors:Yang, G.-F, Lin, H.-Y, Dong, J.
Deposit date:2022-09-16
Release date:2023-09-20
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.889 Å)
Cite:Crystal structure of AtHPPD-Y18734 complex
To Be Published
8H6B
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BU of 8h6b by Molmil
Crystal structure of AtHPPD complexed with YH20702
Descriptor: 4-hydroxyphenylpyruvate dioxygenase, COBALT (II) ION, N-(1-methyl-1,2,3,4-tetrazol-5-yl)-1-pentyl-pyrrolo[2,3-b]pyridine-4-carboxamide
Authors:Yang, G.-F.
Deposit date:2022-10-16
Release date:2023-10-18
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (1.897 Å)
Cite:Crystal structure of AtHPPD complexed with YH20702
To Be Published
8H6A
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BU of 8h6a by Molmil
Crystal structure of AtHPPD complexed with YH21477
Descriptor: 1-[(2-chlorophenyl)methyl]-3-methyl-N-(1-methyl-1,2,3,4-tetrazol-5-yl)-2-oxidanylidene-benzimidazole-4-carboxamide, 4-hydroxyphenylpyruvate dioxygenase, COBALT (II) ION
Authors:Yang, G.-F.
Deposit date:2022-10-16
Release date:2023-10-18
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.601 Å)
Cite:Crystal structure of AtHPPD complexed with YH20702
To Be Published
7WJK
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BU of 7wjk by Molmil
Complex structure of AtHPPD-ZWJ
Descriptor: 3-[2-[4-[[4-[2,2-bis(fluoranyl)-4,6,10,12-tetramethyl-1,3-diaza-2$l^{4}-boratricyclo[7.3.0.0^{3,7}]dodeca-4,6,9,11-tetraen-8-yl]phenoxy]methyl]-1,2,3-triazol-1-yl]ethyl]-1,5-dimethyl-6-[(1S)-2-oxidanyl-6-oxidanylidene-cyclohex-2-en-1-yl]carbonyl-quinazoline-2,4-dione, 4-hydroxyphenylpyruvate dioxygenase, COBALT (II) ION
Authors:Yang, G.-F, Lin, H.-Y, Dong, J.
Deposit date:2022-01-06
Release date:2023-01-25
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.704 Å)
Cite:Complex structure of AtHPPD-PyQ1
To Be Published
3TGU
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BU of 3tgu by Molmil
Cytochrome bc1 complex from chicken with pfvs-designed moa inhibitor bound
Descriptor: 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine, CARDIOLIPIN, Coenzyme Q10, ...
Authors:Huang, L.-S, Yang, G.-F, Berry, E.A.
Deposit date:2011-08-17
Release date:2012-07-04
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Computational discovery of picomolar Q(o) site inhibitors of cytochrome bc1 complex.
J.Am.Chem.Soc., 134, 2012

 

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