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PDB: 603 results

5YDC
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BU of 5ydc by Molmil
Crystal structure of mercury soaked C-terminal domain of Rv1828 from Mycobacterium tuberculosis
Descriptor: MERCURY (II) ION, SULFATE ION, Uncharacterized HTH-type transcriptional regulator Rv1828
Authors:Singh, S, Karthikeyan, S.
Deposit date:2017-09-12
Release date:2018-09-19
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:Characteristics of the essential pathogenicity factor Rv1828, a MerR family transcription regulator from Mycobacterium tuberculosis.
FEBS J., 285, 2018
3LQU
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BU of 3lqu by Molmil
Crystal structure of 3,4-Dihydroxy-2-butanone 4-phosphate synthase complexed with Ribulose-5 phosphate
Descriptor: 3,4-dihydroxy-2-butanone 4-phosphate synthase, 5-O-phosphono-D-xylulose
Authors:Kumar, P, Karthikeyan, S.
Deposit date:2010-02-10
Release date:2010-09-15
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.522 Å)
Cite:Potential anti-bacterial drug target: structural characterization of 3,4-dihydroxy-2-butanone-4-phosphate synthase from Salmonella typhimurium LT2.
Proteins, 78, 2010
8QFU
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BU of 8qfu by Molmil
Diels-Alderase AbyU mutant - Y76F
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, YD repeat-containing protein
Authors:Tiwari, K, Burton, N.M, Yang, S, Race, P.R.
Deposit date:2023-09-05
Release date:2024-09-18
Method:X-RAY DIFFRACTION (1.56 Å)
Cite:Structure of Diels-Alderase AbyU mutant Y76F at 1.56 Angstroms resolution.
To Be Published
2BQ2
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BU of 2bq2 by Molmil
Solution Structure of the DNA Duplex ACGCGU-NA with a 2' Amido-Linked Nalidixic Acid Residue at the 3' Terminal Nucleotide
Descriptor: 5'-D(*AP*CP*GP*CP*GP*2AU)-3', NALIDIXIC ACID
Authors:Siegmund, K, Maheshwary, S, Narayanan, S, Connors, W, Richert, M.
Deposit date:2005-04-26
Release date:2006-08-03
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Molecular details of quinolone-DNA interactions: solution structure of an unusually stable DNA duplex with covalently linked nalidixic acid residues and non-covalent complexes derived from it.
Nucleic Acids Res., 33, 2005
3QDH
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BU of 3qdh by Molmil
Crystal structure of Actinomyces fimbrial adhesin FimA
Descriptor: Fimbrial structural subunit, ZINC ION
Authors:Devarajan, B, Krishnan, V, Narayana, S.V.L.
Deposit date:2011-01-18
Release date:2011-08-24
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Two autonomous structural modules in the fimbrial shaft adhesin FimA mediate Actinomyces interactions with streptococci and host cells during oral biofilm development.
Mol.Microbiol., 81, 2011
6KC2
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BU of 6kc2 by Molmil
Crystal Structure of Lectin from Pleurotus ostreatus in complex with Rhamnose
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Lectin, ...
Authors:Gunasekaran, K, Pletnev, S, Luo, Z, Vajravijayan, S, Nandhagopal, N.
Deposit date:2019-06-26
Release date:2020-08-05
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.246 Å)
Cite:Crystallographic and calorimetric analysis on Pleurotus ostreatus lectin and its sugar complexes - promiscuous binding driven by geometry.
Int.J.Biol.Macromol., 152, 2020
4P8E
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BU of 4p8e by Molmil
Structure of ribB complexed with substrate (Ru5P) and metal ions
Descriptor: 1,2-ETHANEDIOL, 3,4-dihydroxy-2-butanone 4-phosphate synthase, RIBULOSE-5-PHOSPHATE, ...
Authors:Islam, Z, Kumar, A, Singh, S, Salmon, L, Karthikeyan, S.
Deposit date:2014-03-31
Release date:2015-03-25
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:Structural Basis for Competitive Inhibition of 3,4-Dihydroxy-2-butanone-4-phosphate Synthase from Vibrio cholerae.
J.Biol.Chem., 290, 2015
7Q8B
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BU of 7q8b by Molmil
Leishmania major actin filament in ADP-Pi state
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Actin, MAGNESIUM ION, ...
Authors:Kotila, T, Muniyandi, S, Lappalainen, P, Huiskonen, J.T.
Deposit date:2021-11-11
Release date:2022-05-18
Last modified:2022-06-29
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structural basis of rapid actin dynamics in the evolutionarily divergent Leishmania parasite.
Nat Commun, 13, 2022
7Q8C
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BU of 7q8c by Molmil
Leishmania major actin filament in ADP-state
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Actin, MAGNESIUM ION
Authors:Kotila, T, Muniyandi, S, Lappalainen, P, Huiskonen, J.T.
Deposit date:2021-11-11
Release date:2022-05-18
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (2.72 Å)
Cite:Structural basis of rapid actin dynamics in the evolutionarily divergent Leishmania parasite.
Nat Commun, 13, 2022
7WXZ
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BU of 7wxz by Molmil
Crystal structure of the recombinant protein HR121 from the S2 protein of SARS-CoV-2
Descriptor: Spike protein S2'
Authors:Zheng, Y.T, Ouyang, S, Pang, W, Lu, Y, Zhao, Y.B.
Deposit date:2022-02-15
Release date:2022-11-23
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.41 Å)
Cite:A variant-proof SARS-CoV-2 vaccine targeting HR1 domain in S2 subunit of spike protein.
Cell Res., 32, 2022
5XED
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BU of 5xed by Molmil
Heterodimer constructed from M61A PA cyt c551-HT cyt c552 and HT cyt c552-PA cyt c551 chimeric proteins
Descriptor: Cytochrome c-551,Cytochrome c-552, Cytochrome c-552,Cytochrome c-551, HEME C
Authors:Zhang, M, Nakanishi, T, Yamanaka, M, Nagao, S, Yanagisawa, S, Shomura, Y, Shibata, N, Ogura, T, Higuchi, Y, Hirota, S.
Deposit date:2017-04-04
Release date:2017-08-09
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Rational Design of Domain-Swapping-Based c-Type Cytochrome Heterodimers by Using Chimeric Proteins.
Chembiochem, 18, 2017
6IV8
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BU of 6iv8 by Molmil
the selenomethionine(SeMet)-derived Cas13d binary complex
Descriptor: MAGNESIUM ION, RNA (51-MER), RNA (53-MER), ...
Authors:Zhang, B, Ye, Y.M, Ye, W.W, OuYang, S.Y.
Deposit date:2018-12-02
Release date:2019-06-19
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Two HEPN domains dictate CRISPR RNA maturation and target cleavage in Cas13d.
Nat Commun, 10, 2019
3MIO
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BU of 3mio by Molmil
Crystal structure of 3,4-dihydroxy-2-butanone 4-phosphate synthase domain from Mycobacterium tuberculosis at pH 6.00
Descriptor: 3,4-dihydroxy-2-butanone 4-phosphate synthase, GLYCEROL, PHOSPHATE ION, ...
Authors:Singh, M, Karthikeyan, S.
Deposit date:2010-04-11
Release date:2011-02-23
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural basis for pH dependent monomer-dimer transition of 3,4-dihydroxy 2-butanone-4-phosphate synthase domain from Mycobacterium tuberculosis
J.Struct.Biol., 174, 2011
3OVP
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BU of 3ovp by Molmil
Crystal Structure of hRPE
Descriptor: 3,6,9,12,15,18,21,24,27-NONAOXANONACOSANE-1,29-DIOL, FE (II) ION, Ribulose-phosphate 3-epimerase
Authors:Liang, W.G, Ouyang, S.Y, Shaw, N, Joachimiak, A, Zhang, R.G, Liu, Z.J.
Deposit date:2010-09-16
Release date:2011-03-09
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.695 Å)
Cite:Conversion of D-ribulose 5-phosphate to D-xylulose 5-phosphate: new insights from structural and biochemical studies on human RPE
Faseb J., 25, 2011
3OVR
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BU of 3ovr by Molmil
Crystal Structure of hRPE and D-Xylulose 5-Phosphate Complex
Descriptor: 3,6,9,12,15,18,21,24,27-NONAOXANONACOSANE-1,29-DIOL, 5-O-phosphono-D-xylulose, FE (II) ION, ...
Authors:Liang, W.G, Ouyang, S.Y, Shaw, N, Joachimiak, A, Zhang, R.G, Liu, Z.J.
Deposit date:2010-09-17
Release date:2011-03-09
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (1.948 Å)
Cite:Conversion of D-ribulose 5-phosphate to D-xylulose 5-phosphate: new insights from structural and biochemical studies on human RPE
Faseb J., 25, 2011
3TW0
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BU of 3tw0 by Molmil
Structural Analysis of Adhesive Tip pilin, GBS104 from Group B Streptococcus agalactiae
Descriptor: ACETATE ION, Cell wall surface anchor family protein, MAGNESIUM ION
Authors:Krishnan, V, Narayana, S.V.L.
Deposit date:2011-09-21
Release date:2013-03-27
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of Streptococcus agalactiae tip pilin GBS104: a model for GBS pili assembly and host interactions.
Acta Crystallogr.,Sect.D, 69, 2013
3VG9
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BU of 3vg9 by Molmil
Crystal structure of human adenosine A2A receptor with an allosteric inverse-agonist antibody at 2.7 A resolution
Descriptor: 4-{2-[(7-amino-2-furan-2-yl[1,2,4]triazolo[1,5-a][1,3,5]triazin-5-yl)amino]ethyl}phenol, Adenosine receptor A2a, DODECYL-BETA-D-MALTOSIDE, ...
Authors:Hino, T, Arakawa, T, Iwanari, H, Yurugi-Kobayashi, T, Ikeda-Suno, C, Nakada-Nakura, Y, Kusano-Arai, O, Weyand, S, Shimamura, T, Nomura, N, Cameron, A.D, Kobayashi, T, Hamakubo, T, Iwata, S, Murata, T.
Deposit date:2011-08-04
Release date:2012-02-01
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:G-protein-coupled receptor inactivation by an allosteric inverse-agonist antibody
Nature, 482, 2012
4GID
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BU of 4gid by Molmil
Structure of beta-secretase complexed with inhibitor
Descriptor: Beta-secretase 1, L-PROLINAMIDE, N-[(2S)-1-({(2S,3R)-3-hydroxy-1-[(2-methylpropyl)amino]-1-oxobutan-2-yl}amino)-3-phenylpropan-2-yl]-5-[methyl(methylsulfonyl)amino]-N'-[(1R)-1-phenylethyl]benzene-1,3-dicarboxamide
Authors:Ghosh, A, Tang, J, Venkateswara, R.K, Yadav, N, Anderson, D, Gavande, N, Huang, X, Terzyan, S.
Deposit date:2012-08-08
Release date:2012-10-10
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure-based design of highly selective beta-secretase inhibitors: synthesis, biological evaluation, and protein-ligand X-ray crystal structure.
J.Med.Chem., 55, 2012
3VGA
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BU of 3vga by Molmil
Crystal structure of human adenosine A2A receptor with an allosteric inverse-agonist antibody at 3.1 A resolution
Descriptor: 4-{2-[(7-amino-2-furan-2-yl[1,2,4]triazolo[1,5-a][1,3,5]triazin-5-yl)amino]ethyl}phenol, Adenosine receptor A2a, antibody fab fragment heavy chain, ...
Authors:Hino, T, Arakawa, T, Iwanari, H, Yurugi-Kobayashi, T, Ikeda-Suno, C, Nakada-Nakura, Y, Kusano-Arai, O, Weyand, S, Shimamura, T, Nomura, N, Cameron, A.D, Kobayashi, T, Hamakubo, T, Iwata, S, Murata, T.
Deposit date:2011-08-04
Release date:2012-02-01
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:G-protein-coupled receptor inactivation by an allosteric inverse-agonist antibody
Nature, 482, 2012
3LRJ
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BU of 3lrj by Molmil
Crystal structure of 3,4-Dihydroxy-2-butanone 4-phosphate synthase in complex with sulfate ion.
Descriptor: 3,4-Dihydroxy-2-butanone 4-phosphate synthase, SULFATE ION
Authors:Kumar, P, Karthikeyan, S.
Deposit date:2010-02-11
Release date:2010-09-15
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.803 Å)
Cite:Potential anti-bacterial drug target: structural characterization of 3,4-dihydroxy-2-butanone-4-phosphate synthase from Salmonella typhimurium LT2.
Proteins, 78, 2010
5EFX
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BU of 5efx by Molmil
Crystal structure of Rho GTPase regulator
Descriptor: Rho guanine nucleotide exchange factor 2
Authors:Jiang, Y, Ouyang, S, Liu, Z.J.
Deposit date:2015-10-26
Release date:2016-06-29
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.451 Å)
Cite:Crystal structure of hGEF-H1 PH domain provides insight into incapability in phosphoinositide binding
Biochem.Biophys.Res.Commun., 471, 2016
6TYA
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BU of 6tya by Molmil
Structure of N-terminus locked Esp with one pro-peptide residue - V67C, D255C
Descriptor: Glutamyl endopeptidase
Authors:Manne, K, Narayana, S.V.L.
Deposit date:2019-08-08
Release date:2019-08-28
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.065943 Å)
Cite:Structural insights into the role of the N-terminus in the activation and function of extracellular serine protease from Staphylococcus epidermidis
Acta Crystallogr.,Sect.D, 76, 2020
5A16
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BU of 5a16 by Molmil
Crystal structure of Fab4201 raised against Human Erythrocyte Anion Exchanger 1
Descriptor: FAB4201 HEAVY CHAIN
Authors:Arakawa, T, Kobayashi-Yugiri, T, Alguel, Y, Weyand, S, Iwanari, H, Hatae, H, Iwata, M, Abe, Y, Hino, T, Ikeda-Suno, C, Kuma, H, Kang, D, Murata, T, Hamakubo, T, Cameron, A, Kobayashi, T, Hamasaki, N, Iwata, S.
Deposit date:2015-04-28
Release date:2015-06-10
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal Structure of the Anion Exchanger Domain of Human Erythrocyte Band 3
Science, 350, 2015
1PYP
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BU of 1pyp by Molmil
X-RAY DIFFRACTION STUDY OF INORGANIC PYROPHOSPHATASE FROM BAKER,S YEAST AT THE 3 ANGSTROMS RESOLUTION (RUSSIAN)
Descriptor: INORGANIC PYROPHOSPHATASE
Authors:Harutyunyan, E.H, Terzyan, S.S, Vainshtein, B.K.
Deposit date:1983-02-03
Release date:1983-10-27
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (3 Å)
Cite:X-Ray Diffraction Study of Inorganic Pyrophosphatase from Baker,S Yeast at the 3 Angstroms Resolution (Russian)
Dokl.Akad.Nauk Sssr, 258, 1981
3MGZ
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BU of 3mgz by Molmil
Crystal structure of DHBPS domain of bi-functional DHBPS/GTP cyclohydrolase II from Mycobacterium tuberculosis at pH 4.0
Descriptor: 3,4-dihydroxy-2-butanone 4-phosphate synthase, SULFATE ION
Authors:Singh, M, Kumar, P, Karthikeyan, S.
Deposit date:2010-04-07
Release date:2011-02-23
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.07 Å)
Cite:Structural basis for pH dependent monomer-dimer transition of 3,4-dihydroxy 2-butanone-4-phosphate synthase domain from Mycobacterium tuberculosis
J.Struct.Biol., 174, 2011

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