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PDB: 209 results

4FD9
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Crystal structure of the third beta-gamma-crystallin domain of Crybg3 (betagamma-crystallin domain-containing protein 3) from Mus musculus
Descriptor: Beta/gamma crystallin domain-containing protein 3
Authors:Aravind, P, Srivastava, S.S, Sankaranarayanan, R.
Deposit date:2012-05-26
Release date:2013-04-10
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Aggregation-prone near-native intermediate formation during unfolding of a structurally similar nonlenticular beta/gamma-crystallin domain
Biochemistry, 51, 2012
1Y2Q
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BU of 1y2q by Molmil
Crystal structure of the editing domain of threonyl-tRNA synthetase from Pyrococcus abyssi
Descriptor: Threonyl-tRNA synthetase
Authors:Dwivedi, S, Kruparani, S.P, Sankaranarayanan, R.
Deposit date:2004-11-23
Release date:2005-06-14
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:A D-amino acid editing module coupled to the translational apparatus in archaea
Nat.Struct.Mol.Biol., 12, 2005
2JR3
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Antibacterial Peptide from Eggshell Matrix: Structure and Self-assembly of beta-defensin Like Peptide from the Chinese Soft-shelled Turtle Eggshell
Descriptor: Pelovaterin
Authors:Vivekanandan, S, Lakshminarayanan, R, Jois, S.D.S, Perumal Samy, R, Banerjee, Y, Chi-Jin, E.O, Teo, K.W, Kini, R.M, Valiyaveettil, S.
Deposit date:2007-06-20
Release date:2008-05-27
Last modified:2023-12-20
Method:SOLUTION NMR
Cite:Structure, self-assembly, and dual role of a beta-defensin-like peptide from the Chinese soft-shelled turtle eggshell matrix.
J.Am.Chem.Soc., 130, 2008
2HKZ
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Crystal structure of the editing domain of threonyl-tRNA synthetase from Pyrococcus abyssi in complex with L-serine
Descriptor: SERINE, Threonyl-tRNA synthetase
Authors:Dwivedi, S, Kruparani, S.P, Sankaranarayanan, R.
Deposit date:2006-07-06
Release date:2006-08-29
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Post-transfer editing mechanism of a D-aminoacyl-tRNA deacylase-like domain in threonyl-tRNA synthetase from archaea
Embo J., 25, 2006
4NBI
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BU of 4nbi by Molmil
D-aminoacyl-tRNA deacylase (DTD) from Plasmodium falciparum in complex with D-tyrosyl-3'-aminoadenosine at 1.86 Angstrom resolution
Descriptor: 3'-deoxy-3'-(D-tyrosylamino)adenosine, D-tyrosyl-tRNA(Tyr) deacylase, TRIETHYLENE GLYCOL
Authors:Ahmad, S, Routh, S.B, Kamarthapu, V, Sankaranarayanan, R.
Deposit date:2013-10-23
Release date:2013-12-18
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Mechanism of chiral proofreading during translation of the genetic code.
Elife, 2, 2013
4NBJ
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D-aminoacyl-tRNA deacylase (DTD) from Plasmodium falciparum in complex with D-tyrosyl-3'-aminoadenosine at 2.20 Angstrom resolution
Descriptor: 3'-deoxy-3'-(D-tyrosylamino)adenosine, D-tyrosyl-tRNA(Tyr) deacylase
Authors:Ahmad, S, Routh, S.B, Kamarthapu, V, Sankaranarayanan, R.
Deposit date:2013-10-23
Release date:2013-12-18
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Mechanism of chiral proofreading during translation of the genetic code.
Elife, 2, 2013
2HL2
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Crystal structure of the editing domain of threonyl-tRNA synthetase from Pyrococcus abyssi in complex with an analog of seryladenylate
Descriptor: 5'-O-(N-(L-SERYL)-SULFAMOYL)ADENOSINE, Threonyl-tRNA synthetase
Authors:Hussain, T, Kruparani, S.P, Pal, B, Sankaranarayanan, R.
Deposit date:2006-07-06
Release date:2006-08-29
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Post-transfer editing mechanism of a D-aminoacyl-tRNA deacylase-like domain in threonyl-tRNA synthetase from archaea
Embo J., 25, 2006
2HL0
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Crystal structure of the editing domain of threonyl-tRNA synthetase from Pyrococcus abyssi in complex with seryl-3'-aminoadenosine
Descriptor: SERINE-3'-AMINOADENOSINE, Threonyl-tRNA synthetase
Authors:Hussain, T, Kruparani, S.P, Pal, B, Sankaranarayanan, R.
Deposit date:2006-07-06
Release date:2006-08-29
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Post-transfer editing mechanism of a D-aminoacyl-tRNA deacylase-like domain in threonyl-tRNA synthetase from archaea
Embo J., 25, 2006
2HL1
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Crystal structure of the editing domain of threonyl-tRNA synthetase from Pyrococcus abyssi in complex with seryl-3'-aminoadenosine
Descriptor: SERINE-3'-AMINOADENOSINE, Threonyl-tRNA synthetase
Authors:Hussain, T, Kruparani, S.P, Pal, B, Sankaranarayanan, R.
Deposit date:2006-07-06
Release date:2006-08-29
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Post-transfer editing mechanism of a D-aminoacyl-tRNA deacylase-like domain in threonyl-tRNA synthetase from archaea
Embo J., 25, 2006
2EVD
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BU of 2evd by Molmil
Crystal structure of human Glycolipid Transfer Protein complexed with 12:0 Lactosylceramide
Descriptor: DECANE, Glycolipid transfer protein, LAURIC ACID, ...
Authors:Malinina, L, Malakhova, M.L, Kanack, A.T, Abagyan, R, Brown, R.E, Patel, D.J.
Deposit date:2005-10-31
Release date:2006-11-14
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2 Å)
Cite:The liganding of glycolipid transfer protein is controlled by glycolipid acyl structure.
Plos Biol., 4, 2006
2EVL
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Crystal structure of human Glycolipid Transfer Protein complexed with 18:2 Galactosylceramide
Descriptor: Glycolipid transfer protein, LINOLEIC ACID, N-OCTANE, ...
Authors:Malinina, L, Malakhova, M.L, Kanack, A.T, Abagyan, R, Brown, R.E, Patel, D.J.
Deposit date:2005-10-31
Release date:2006-11-14
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The liganding of glycolipid transfer protein is controlled by glycolipid acyl structure.
Plos Biol., 4, 2006
2EUM
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BU of 2eum by Molmil
Crystal structure of human Glycolipid Transfer Protein complexed with 8:0 Lactosylceramide
Descriptor: DECANE, Glycolipid transfer protein, N-OCTANE, ...
Authors:Malinina, L, Malakhova, M.L, Kanack, A.T, Abagyan, R, Brown, R.E, Patel, D.J.
Deposit date:2005-10-28
Release date:2006-11-14
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The liganding of glycolipid transfer protein is controlled by glycolipid acyl structure.
Plos Biol., 4, 2006
2EVS
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BU of 2evs by Molmil
Crystal structure of human Glycolipid Transfer Protein complexed with n-hexyl-beta-D-glucoside
Descriptor: DECANE, Glycolipid transfer protein, HEXANE, ...
Authors:Malinina, L, Malakhova, M.L, Kanack, A.T, Abagyan, R, Brown, R.E, Patel, D.J.
Deposit date:2005-10-31
Release date:2006-11-14
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The liganding of glycolipid transfer protein is controlled by glycolipid acyl structure.
Plos Biol., 4, 2006
2EUK
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Crystal Structure of Human Glycolipid Transfer Protein complexed with 24:1 Galactosylceramide
Descriptor: (15E)-TETRACOS-15-ENOIC ACID, Glycolipid transfer protein, N-OCTANE, ...
Authors:Malinina, L, Malakhova, M.L, Kanack, A.T, Abagyan, R, Brown, R.E, Patel, D.J.
Deposit date:2005-10-28
Release date:2006-11-14
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:The liganding of glycolipid transfer protein is controlled by glycolipid acyl structure.
Plos Biol., 4, 2006
7TJF
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BU of 7tjf by Molmil
S. cerevisiae ORC bound to 84 bp ARS1 DNA
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, DNA, 84 bp ARS1, ...
Authors:Schmidt, J.M, Yang, R, Kumar, A, Hunker, O, Bleichert, F.
Deposit date:2022-01-16
Release date:2023-01-18
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (2.6 Å)
Cite:A mechanism of origin licensing control through autoinhibition of S. cerevisiae ORC·DNA·Cdc6.
Nat Commun, 13, 2022
6WZB
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BU of 6wzb by Molmil
Crystal structure of the GltPh V216C-G388C mutant cross-linked with divalent mercury
Descriptor: ASPARTIC ACID, Glutamate transporter homolog, MERCURY (II) ION, ...
Authors:Chen, I, Font, J, Ryan, R.
Deposit date:2020-05-13
Release date:2021-02-17
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3.45 Å)
Cite:Glutamate transporters have a chloride channel with two hydrophobic gates.
Nature, 591, 2021
6X01
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BU of 6x01 by Molmil
Crystal structure of the GltPh V216C-A391C mutant cross-linked in outward-facing state
Descriptor: ASPARTIC ACID, Glutamate transporter homolog, SODIUM ION
Authors:Chen, I, Font, J, Ryan, R.
Deposit date:2020-05-15
Release date:2021-02-17
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (3.65 Å)
Cite:Glutamate transporters have a chloride channel with two hydrophobic gates.
Nature, 591, 2021
7TJI
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BU of 7tji by Molmil
S. cerevisiae ORC bound to 84 bp ARS1 DNA and Cdc6 (state 2) with flexible Orc6 N-terminal domain
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Cell division control protein 6, DNA, ...
Authors:Schmidt, J.M, Yang, R, Kumar, A, Hunker, O, Bleichert, F.
Deposit date:2022-01-16
Release date:2022-10-05
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:A mechanism of origin licensing control through autoinhibition of S. cerevisiae ORC·DNA·Cdc6.
Nat Commun, 13, 2022
7TJH
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BU of 7tjh by Molmil
S. cerevisiae ORC bound to 84 bp ARS1 DNA and Cdc6 (state 1) with flexible Orc6 N-terminal domain
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Cell division control protein 6, DNA, ...
Authors:Schmidt, J.M, Yang, R, Kumar, A, Hunker, O, Bleichert, F.
Deposit date:2022-01-16
Release date:2022-10-05
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (2.5 Å)
Cite:A mechanism of origin licensing control through autoinhibition of S. cerevisiae ORC·DNA·Cdc6.
Nat Commun, 13, 2022
5ZRN
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BU of 5zrn by Molmil
Inhibitor bound crystal structure of N-terminal domain of FACL13 from Mycobacterium tuberculosis
Descriptor: 5'-O-{[(1R)-1-hydroxydodecyl]sulfamoyl}adenosine, Long-chain-fatty-acid--CoA ligase FadD13
Authors:Goyal, A, Sankaranarayanan, R.
Deposit date:2018-04-24
Release date:2019-04-24
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.37 Å)
Cite:Inhibitor bound crystal structure of N-terminal domain of FACL13 from Mycobacterium tuberculosis
To Be Published
7TJJ
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BU of 7tjj by Molmil
S. cerevisiae ORC bound to 84 bp ARS1 DNA and Cdc6 (state 1) with docked Orc6 N-terminal domain
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Cell division control protein 6, DNA, ...
Authors:Schmidt, J.M, Yang, R, Kumar, A, Hunker, O, Bleichert, F.
Deposit date:2022-01-16
Release date:2022-10-05
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:A mechanism of origin licensing control through autoinhibition of S. cerevisiae ORC·DNA·Cdc6.
Nat Commun, 13, 2022
5ZNH
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Catechol 2,3-dioxygenase with 4-methyl catechol from Diaphorobacter sp DS2
Descriptor: 1,2-ETHANEDIOL, 4-METHYLCATECHOL, CALCIUM ION, ...
Authors:Mishra, K, Arya, C.K, Subramaniyan, R, Ramanathan, G.
Deposit date:2018-04-09
Release date:2019-04-17
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:catechol 2,3-dioxygenase with 4-methyl catechol from Diaphorobacter sp DS2
To Be Published
7TJK
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BU of 7tjk by Molmil
S. cerevisiae ORC bound to 84 bp ARS1 DNA and Cdc6 (state 2) with docked Orc6 N-terminal domain
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Cell division control protein 6, DNA, ...
Authors:Schmidt, J.M, Yang, R, Kumar, A, Hunker, O, Bleichert, F.
Deposit date:2022-01-16
Release date:2022-10-05
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:A mechanism of origin licensing control through autoinhibition of S. cerevisiae ORC·DNA·Cdc6.
Nat Commun, 13, 2022
6AY6
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BU of 6ay6 by Molmil
Naegleria fowleri CYP51-voriconazole complex
Descriptor: CYP51, sterol 14alpha-demethylase, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Debnath, A, Calvet, C.M, Jennings, G, Zhou, W, Aksenov, A, Luth, M, Abagyan, R, Nes, W.D, McKerrow, J.H, Podust, L.M.
Deposit date:2017-09-07
Release date:2017-11-22
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:CYP51 is an essential drug target for the treatment of primary amoebic meningoencephalitis (PAM).
PLoS Negl Trop Dis, 11, 2017
6AYB
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Naegleria fowleri CYP51-ketoconazole complex
Descriptor: 1,2-ETHANEDIOL, 1-acetyl-4-(4-{[(2R,4S)-2-(2,4-dichlorophenyl)-2-(1H-imidazol-1-ylmethyl)-1,3-dioxolan-4-yl]methoxy}phenyl)piperazine, CALCIUM ION, ...
Authors:Debnath, A, Calvet, C.M, Jennings, G, Zhou, W, Aksenov, A, Luth, M, Abagyan, R, Nes, W.D, McKerrow, J.H, Podust, L.M.
Deposit date:2017-09-08
Release date:2017-11-22
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:CYP51 is an essential drug target for the treatment of primary amoebic meningoencephalitis (PAM).
PLoS Negl Trop Dis, 11, 2017

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