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PDB: 240 results

7E07
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BU of 7e07 by Molmil
Trans-3/4-proline-hydroxylase H11 with AKG and L-proline
Descriptor: 2-OXOGLUTARIC ACID, FE (III) ION, PROLINE, ...
Authors:Gong, W.G, Yang, L.Y.
Deposit date:2021-01-27
Release date:2022-02-02
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.14 Å)
Cite:Trans-3/4-proline-hydroxylase H11 with AKG and L-proline
To Be Published
7E05
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BU of 7e05 by Molmil
Trans-3/4-proline-hydroxylase H11 apo structure
Descriptor: Phytanoyl-CoA dioxygenase
Authors:Gong, W.G, Yang, L.Y.
Deposit date:2021-01-27
Release date:2022-02-02
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:Trans-3/4-proline-hydroxylase H11 with AKG and L-proline
To Be Published
7E00
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BU of 7e00 by Molmil
Trans-proline-hydroxylase H11 with Succinic and L-proline in the fourth reaction state.
Descriptor: 2-OXOGLUTARIC ACID, OXYGEN ATOM, PROLINE, ...
Authors:Gong, W.G, Yang, L.Y.
Deposit date:2021-01-26
Release date:2022-02-02
Last modified:2024-04-17
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Trans-3/4-proline-hydroxylase H11 with AKG and L-proline
To Be Published
7E09
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BU of 7e09 by Molmil
Trans-3/4-proline-hydroxylase H11 with 3-hydroxyl-proline
Descriptor: 3-HYDROXYPROLINE, Phytanoyl-CoA dioxygenase
Authors:Gong, W.G, Yang, L.Y.
Deposit date:2021-01-27
Release date:2022-02-02
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.38 Å)
Cite:Trans-3/4-proline-hydroxylase H11 with AKG and L-proline
To Be Published
7E06
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BU of 7e06 by Molmil
Trans-3/4-proline-hydroxylase H11 with AKG
Descriptor: 2-OXOGLUTARIC ACID, FE (III) ION, Phytanoyl-CoA dioxygenase
Authors:Gong, W.G, Yang, L.Y.
Deposit date:2021-01-27
Release date:2022-02-02
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Trans-3/4-proline-hydroxylase H11 with AKG and L-proline
To Be Published
6J3L
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BU of 6j3l by Molmil
Solution structure of the N-terminal extended protuberant domain of eukaryotic ribosomal stalk protein P0
Descriptor: 60S acidic ribosomal protein P0
Authors:Choi, K.H.A, Lee, K.M, Yang, L, Wing-Heng Yu, C, Banfield, D.K, Ito, K, Uchiumi, T, Wong, K.B.
Deposit date:2019-01-04
Release date:2019-09-04
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural and Mutagenesis Studies Evince the Role of the Extended Protuberant Domain of Ribosomal Protein uL10 in Protein Translation.
Biochemistry, 58, 2019
7JX4
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BU of 7jx4 by Molmil
Crystal Structure of N-Lysine Peptoid-modified Collagen Triple Helix
Descriptor: Collagen mimetic peptide with N-Lysine guest
Authors:Yu, M.S, Whitby, F.G, Hill, C.P, Kessler, J.L, Yang, L.D.
Deposit date:2020-08-26
Release date:2021-07-21
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (0.95 Å)
Cite:Peptoid Residues Make Diverse, Hyperstable Collagen Triple-Helices.
J.Am.Chem.Soc., 143, 2021
7JX5
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BU of 7jx5 by Molmil
Crystal Structure of N-Phenylalanine Peptoid-modified Collagen Triple Helix
Descriptor: Collagen mimetic peptide with N-Phenylalanine guest
Authors:Yu, M.S, Whitby, F.G, Hill, C.P, Kessler, J.L, Yang, L.D.
Deposit date:2020-08-26
Release date:2021-07-21
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Peptoid Residues Make Diverse, Hyperstable Collagen Triple-Helices
J.Am.Chem.Soc., 143, 2021
7DT0
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BU of 7dt0 by Molmil
Proline hydroxylase H11-N101I mutant
Descriptor: 2-OXOGLUTARIC ACID, FE (III) ION, PROLINE, ...
Authors:Gong, W.G, Yang, L.Y.
Deposit date:2021-01-04
Release date:2022-01-12
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.43 Å)
Cite:Trans-3/4-proline-hydroxylase H11 with AKG and L-proline
To Be Published
7E4A
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BU of 7e4a by Molmil
Crystal structure of MIF bound to compound 13
Descriptor: CHLORIDE ION, Flavoxate, Macrophage migration inhibitory factor, ...
Authors:Fa, C.P, Guo, D.Y, Yang, L.
Deposit date:2021-02-11
Release date:2023-02-15
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.475 Å)
Cite:Identification and Structure-Activity Relationships of Dietary Flavonoids as Human Macrophage Migration Inhibitory Factor (MIF) Inhibitors.
J.Agric.Food Chem., 69, 2021
7E49
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BU of 7e49 by Molmil
Crystal structure of MIF bound to compound10
Descriptor: 3,5,7-TRIHYDROXY-2-(3,4,5-TRIHYDROXYPHENYL)-4H-CHROMEN-4-ONE, CHLORIDE ION, Macrophage migration inhibitory factor
Authors:Fan, C.P, Guo, D.Y, Yang, L.
Deposit date:2021-02-11
Release date:2023-02-15
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.574 Å)
Cite:Identification and Structure-Activity Relationships of Dietary Flavonoids as Human Macrophage Migration Inhibitory Factor (MIF) Inhibitors.
J.Agric.Food Chem., 69, 2021
7E47
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BU of 7e47 by Molmil
Crystal structure of compound 6 bound to MIF
Descriptor: (2S,3R,4R,5R,6R)-2-[(2S,3R,4S,5R,6S)-6-(hydroxymethyl)-2-[[(2R,4R)-2-(4-hydroxyphenyl)-4,5-bis(oxidanyl)-3,4-dihydro-2H-chromen-7-yl]oxy]-4,5-bis(oxidanyl)oxan-3-yl]oxy-6-methyl-oxane-3,4,5-triol, CHLORIDE ION, Macrophage migration inhibitory factor
Authors:Fan, C.P, Yang, L, Guo, D.Y.
Deposit date:2021-02-10
Release date:2023-02-15
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.38 Å)
Cite:Identification and Structure-Activity Relationships of Dietary Flavonoids as Human Macrophage Migration Inhibitory Factor (MIF) Inhibitors.
J.Agric.Food Chem., 69, 2021
7E4C
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BU of 7e4c by Molmil
Crystal structure of MIF bound to compound11
Descriptor: 4-[(3R)-8,8-dimethyl-3,4-dihydro-2H,8H-pyrano[2,3-f]chromen-3-yl]benzene-1,3-diol, CHLORIDE ION, Macrophage migration inhibitory factor, ...
Authors:Fan, C.P, Guo, D.Y, Yang, L.
Deposit date:2021-02-11
Release date:2023-02-15
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.644 Å)
Cite:Identification and Structure-Activity Relationships of Dietary Flavonoids as Human Macrophage Migration Inhibitory Factor (MIF) Inhibitors.
J.Agric.Food Chem., 69, 2021
7E45
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BU of 7e45 by Molmil
Crystal structure of compound 7 bound to MIF
Descriptor: (2R)-7-[(2R,3R,4R,5S,6S)-6-(hydroxymethyl)-3-[(2R,3R,4R,5R,6S)-6-methyl-3,4,5-tris(oxidanyl)oxan-2-yl]oxy-4,5-bis(oxidanyl)oxan-2-yl]oxy-2-(4-methoxy-3-oxidanyl-phenyl)-5-oxidanyl-2,3-dihydrochromen-4-one, CHLORIDE ION, Macrophage migration inhibitory factor
Authors:Fan, C.P, Yang, L.
Deposit date:2021-02-10
Release date:2023-02-15
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.433 Å)
Cite:Identification and Structure-Activity Relationships of Dietary Flavonoids as Human Macrophage Migration Inhibitory Factor (MIF) Inhibitors.
J.Agric.Food Chem., 69, 2021
7E4B
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BU of 7e4b by Molmil
Crystal structure of MIF bound to compound 5
Descriptor: 2-[2,4-bis(oxidanyl)phenyl]-3,5,7-tris(oxidanyl)chromen-4-one, CHLORIDE ION, Macrophage migration inhibitory factor
Authors:Fan, C.P, Guo, D.Y, Yang, L.
Deposit date:2021-02-11
Release date:2023-02-15
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.772 Å)
Cite:Identification and Structure-Activity Relationships of Dietary Flavonoids as Human Macrophage Migration Inhibitory Factor (MIF) Inhibitors.
J.Agric.Food Chem., 69, 2021
5YAV
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BU of 5yav by Molmil
Fragment-based Drug Discovery of inhibitors to block PDEdelta-RAS protein-protein interaction
Descriptor: 1-phenyl-5-propan-2-ylsulfanyl-1,2,3,4-tetrazole, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta
Authors:Bing, X, Yanlian, L, Danyan, C.
Deposit date:2017-09-01
Release date:2018-09-05
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.989 Å)
Cite:Fragment-based Drug Discovery of inhibitors to block PDEdelta-RAS protein-protein interaction
To Be Published
5YOU
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BU of 5you by Molmil
Crystal structure of BRD4-BD1 bound with hjp64
Descriptor: (3~{R})-4-cyclopropyl-~{N},1,3-trimethyl-~{N}-(4-methylphenyl)-2-oxidanylidene-3~{H}-quinoxaline-6-carboxamide, Bromodomain-containing protein 4
Authors:Bing, X, Jianping, H, Yanlian, L, Danyan, C.
Deposit date:2017-10-31
Release date:2018-11-07
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.503 Å)
Cite:Crystal structure of BRD4-BD1 bound with hjp64
To Be Published
7DZZ
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BU of 7dzz by Molmil
Trans-3/4-proline-hydroxylase H11-stateV
Descriptor: OXYGEN ATOM, PROLINE, Phytanoyl-CoA dioxygenase, ...
Authors:Gong, W.G, Yang, L.Y.
Deposit date:2021-01-26
Release date:2022-02-02
Last modified:2024-04-17
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Trans-3/4-proline-hydroxylase H11-stateV
To Be Published
7E01
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BU of 7e01 by Molmil
Trans-3/4-proline-hydroxylase H11 in the sixth reaction state
Descriptor: OXYGEN ATOM, PROLINE, Phytanoyl-CoA dioxygenase
Authors:Gong, W.G, Yang, L.Y.
Deposit date:2021-01-26
Release date:2022-02-02
Last modified:2024-04-17
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:Trans-3/4-proline-hydroxylase H11 with 3-Hydroxyl-proline
To Be Published
7E08
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BU of 7e08 by Molmil
Trans-3/4-proline-hydroxylase H11 with 4-Hydroxyl-proline
Descriptor: 4-HYDROXYPROLINE, Phytanoyl-CoA dioxygenase
Authors:Gong, W.G, Yang, L.Y.
Deposit date:2021-01-27
Release date:2022-02-02
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:Trans-3/4-proline-hydroxylase H11 4-Hydroxyl-proline
To Be Published
7DYQ
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BU of 7dyq by Molmil
Crystal structure of histone lysine demethylase 4D (KDM4D) in complex with the inhibitor 5-hydroxy-2-methylpyrazolo[1,5-a]pyrido[3,2-e]pyrimidine-3-carbonitrile
Descriptor: 5-hydroxy-2-methylpyrazolo[1,5-a]pyrido[3,2-e]pyrimidine-3-carbonitrile, FE (III) ION, Lysine-specific demethylase 4D
Authors:Wang, T, Yang, L.
Deposit date:2021-01-22
Release date:2022-01-26
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.998 Å)
Cite:Crystal structure of histone lysine demethylase 4D (KDM4D) in complex with the inhibitor 5-hydroxy-2-methylpyrazolo[1,5-a]pyrido[3,2-e]pyrimidine-3-carbonitrile
To Be Published
7DYG
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BU of 7dyg by Molmil
Histone lysine demethylase 4D (KDM4D) in complex with the inhibitor 2-(1H-pyrazol-3-yl)isonicotinic acid
Descriptor: 2-(1H-pyrazol-3-yl)pyridine-4-carboxylic acid, FE (III) ION, Lysine-specific demethylase 4D
Authors:Wang, T, Yang, L.
Deposit date:2021-01-21
Release date:2022-01-26
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of histone lysine demethylase 4D (KDM4D) in complex with the inhibitor 2-(1H-pyrazol-3-yl)isonicotinic acid
To Be Published
7EY2
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BU of 7ey2 by Molmil
Bifunctional xylosidase/glucosidase LXYL D300N mutant with intermediate substrate xylose
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Beta-D-xylosidase/beta-D-glucosidase, Xylitol, ...
Authors:Gong, W.M, Yang, L.Y.
Deposit date:2021-05-29
Release date:2022-06-01
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.43 Å)
Cite:Bifunctional xylosidase/glucosidase LXYL with intermediate substrate xylose
To Be Published
7EY1
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BU of 7ey1 by Molmil
Bifunctional xylosidase/glucosidase LXYL with intermediate substrate xylose
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(4-3)-alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Beta-D-xylosidase/beta-D-glucosidase, ...
Authors:Gong, W.M, Yang, L.Y.
Deposit date:2021-05-29
Release date:2022-06-01
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.46 Å)
Cite:Bifunctional xylosidase/glucosidase LXYL with intermediate substrate xylose
To Be Published
5YAW
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BU of 5yaw by Molmil
Fragment-based Drug Discovery of inhibitors to block PDEdelta-RAS protein-protein interaction
Descriptor: 3-[(4-methoxyphenyl)methylsulfanyl]-5-(2-methylpropyl)-4-(phenylmethyl)-1,2,4-triazole, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta
Authors:Bing, X, Yanlian, L, Danyan, C.
Deposit date:2017-09-01
Release date:2018-09-05
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.027 Å)
Cite:Fragment-based Drug Discovery of inhibitors to block PDEdelta-RAS protein-protein interaction
To Be Published

226707

數據於2024-10-30公開中

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