Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 248 件

8PVD
DownloadVisualize
BU of 8pvd by Molmil
Structure of catalase determined by cryoEM at 100 keV
分子名称: Catalase, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, PROTOPORPHYRIN IX CONTAINING FE
著者McMullan, G, Naydenova, K, Mihaylov, D, Peet, M.J, Wilson, H, Yamashita, K, Dickerson, J.L, Chen, S, Cannone, G, Lee, Y, Hutchings, K.A, Gittins, O, Sobhy, M, Wells, T, El-Gomati, M.M, Dalby, J, Meffert, M, Schulze-Briese, C, Henderson, R, Russo, C.J.
登録日2023-07-17
公開日2023-11-29
最終更新日2023-12-06
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Structure determination by cryoEM at 100 keV.
Proc.Natl.Acad.Sci.USA, 120, 2023
8PVA
DownloadVisualize
BU of 8pva by Molmil
Structure of bacterial ribosome determined by cryoEM at 100 keV
分子名称: 16S rRNA, 23S rRNA, 50S ribosomal protein L14, ...
著者McMullan, G, Naydenova, K, Mihaylov, D, Peet, M.J, Wilson, H, Yamashita, K, Dickerson, J.L, Chen, S, Cannone, G, Lee, Y, Hutchings, K.A, Gittins, O, Sobhy, M, Wells, T, El-Gomati, M.M, Dalby, J, Meffert, M, Schulze-Briese, C, Henderson, R, Russo, C.J.
登録日2023-07-17
公開日2023-11-29
最終更新日2024-04-24
実験手法ELECTRON MICROSCOPY (4.5 Å)
主引用文献Structure determination by cryoEM at 100 keV.
Proc.Natl.Acad.Sci.USA, 120, 2023
8PVB
DownloadVisualize
BU of 8pvb by Molmil
Structure of GABAAR determined by cryoEM at 100 keV
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, DECANE, ...
著者McMullan, G, Naydenova, K, Mihaylov, D, Peet, M.J, Wilson, H, Yamashita, K, Dickerson, J.L, Chen, S, Cannone, G, Lee, Y, Hutchings, K.A, Gittins, O, Sobhy, M, Wells, T, El-Gomati, M.M, Dalby, J, Meffert, M, Schulze-Briese, C, Henderson, R, Russo, C.J.
登録日2023-07-17
公開日2023-11-29
最終更新日2024-01-31
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Structure determination by cryoEM at 100 keV.
Proc.Natl.Acad.Sci.USA, 120, 2023
8PVI
DownloadVisualize
BU of 8pvi by Molmil
Structure of PaaZ determined by cryoEM at 100 keV
分子名称: Bifunctional protein PaaZ
著者McMullan, G, Naydenova, K, Mihaylov, D, Peet, M.J, Wilson, H, Yamashita, K, Dickerson, J.L, Chen, S, Cannone, G, Lee, Y, Hutchings, K.A, Gittins, O, Sobhy, M, Wells, T, El-Gomati, M.M, Dalby, J, Meffert, M, Schulze-Briese, C, Henderson, R, Russo, C.J.
登録日2023-07-17
公開日2023-11-29
最終更新日2023-12-06
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Structure determination by cryoEM at 100 keV.
Proc.Natl.Acad.Sci.USA, 120, 2023
8PVF
DownloadVisualize
BU of 8pvf by Molmil
Structure of GAPDH determined by cryoEM at 100 keV
分子名称: Glyceraldehyde-3-phosphate dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
著者McMullan, G, Naydenova, K, Mihaylov, D, Peet, M.J, Wilson, H, Yamashita, K, Dickerson, J.L, Chen, S, Cannone, G, Lee, Y, Hutchings, K.A, Gittins, O, Sobhy, M, Wells, T, El-Gomati, M.M, Dalby, J, Meffert, M, Schulze-Briese, C, Henderson, R, Russo, C.J.
登録日2023-07-17
公開日2023-11-29
最終更新日2023-12-06
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Structure determination by cryoEM at 100 keV.
Proc.Natl.Acad.Sci.USA, 120, 2023
2A70
DownloadVisualize
BU of 2a70 by Molmil
Crystal structure of Emp47p carbohydrate recognition domain (CRD), monoclinic crystal form 2
分子名称: 1,2-ETHANEDIOL, Emp47p
著者Satoh, T, Sato, K, Kanoh, A, Yamashita, K, Katoh, R, Nakano, A, Wakatsuki, S.
登録日2005-07-04
公開日2006-01-31
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献Structures of the carbohydrate recognition domain of Ca2+-independent cargo receptors Emp46p and Emp47p.
J.Biol.Chem., 281, 2006
8PVH
DownloadVisualize
BU of 8pvh by Molmil
Structure of human apo ALDH1A1 determined by cryoEM at 100 keV
分子名称: Aldehyde dehydrogenase 1A1, CHLORIDE ION
著者McMullan, G, Naydenova, K, Mihaylov, D, Peet, M.J, Wilson, H, Yamashita, K, Dickerson, J.L, Chen, S, Cannone, G, Lee, Y, Hutchings, K.A, Gittins, O, Sobhy, M, Wells, T, El-Gomati, M.M, Dalby, J, Meffert, M, Schulze-Briese, C, Henderson, R, Russo, C.J.
登録日2023-07-17
公開日2023-11-29
最終更新日2023-12-06
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Structure determination by cryoEM at 100 keV.
Proc.Natl.Acad.Sci.USA, 120, 2023
8PV9
DownloadVisualize
BU of 8pv9 by Molmil
Structure of DPS determined by cryoEM at 100 keV
分子名称: DNA protection during starvation protein
著者McMullan, G, Naydenova, K, Mihaylov, D, Peet, M.J, Wilson, H, Yamashita, K, Dickerson, J.L, Chen, S, Cannone, G, Lee, Y, Hutchings, K.A, Gittins, O, Sobhy, M, Wells, T, El-Gomati, M.M, Dalby, J, Meffert, M, Schulze-Briese, C, Henderson, R, Russo, C.J.
登録日2023-07-17
公開日2023-11-29
最終更新日2023-12-06
実験手法ELECTRON MICROSCOPY (2.7 Å)
主引用文献Structure determination by cryoEM at 100 keV.
Proc.Natl.Acad.Sci.USA, 120, 2023
2A6Y
DownloadVisualize
BU of 2a6y by Molmil
Crystal structure of Emp47p carbohydrate recognition domain (CRD), tetragonal crystal form
分子名称: Emp47p (form1), SULFATE ION
著者Satoh, T, Sato, K, Kanoh, A, Yamashita, K, Kato, R, Nakano, A, Wakatsuki, S.
登録日2005-07-04
公開日2006-01-31
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.42 Å)
主引用文献Structures of the carbohydrate recognition domain of Ca2+-independent cargo receptors Emp46p and Emp47p.
J.Biol.Chem., 281, 2006
2A6W
DownloadVisualize
BU of 2a6w by Molmil
Crystal structure of Emp46p carbohydrate recognition domain (CRD), metal-free form
分子名称: Emp46p
著者Satoh, T, Sato, K, Kanoh, A, Yamashita, K, Kato, R, Nakano, A, Wakatsuki, S.
登録日2005-07-04
公開日2006-01-31
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Structures of the carbohydrate recognition domain of Ca2+-independent cargo receptors Emp46p and Emp47p.
J.Biol.Chem., 281, 2006
2A71
DownloadVisualize
BU of 2a71 by Molmil
Crystal structure of Emp47p carbohydrate recognition domain (CRD), orthorhombic crystal form
分子名称: Emp47p
著者Satoh, T, Sato, K, Kanoh, A, Yamashita, K, Kato, R, Nakano, A, Wakatsuki, S.
登録日2005-07-04
公開日2006-01-31
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structures of the carbohydrate recognition domain of Ca2+-independent cargo receptors Emp46p and Emp47p.
J.Biol.Chem., 281, 2006
5YRB
DownloadVisualize
BU of 5yrb by Molmil
Crystal Structure of Oxidized Cypovirus Polyhedra R13A/E73C/Y83C/S193C/A194C Mutant
分子名称: 1,2-ETHANEDIOL, Polyhedrin
著者Negishi, H, Abe, S, Yamashita, K, Hirata, K, Niwase, K, Boudes, M, Coulibaly, F, Mori, H, Ueno, T.
登録日2017-11-09
公開日2018-02-21
最終更新日2018-03-07
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Supramolecular protein cages constructed from a crystalline protein matrix
Chem. Commun. (Camb.), 54, 2018
5YRA
DownloadVisualize
BU of 5yra by Molmil
Crystal Structure of Cypovirus Polyhedra R13A/S193C/A194C Mutant
分子名称: 1,2-ETHANEDIOL, Polyhedrin
著者Negishi, H, Abe, S, Yamashita, K, Hirata, K, Niwase, K, Boudes, M, Coulibaly, F, Mori, H, Ueno, T.
登録日2017-11-09
公開日2018-02-21
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.79 Å)
主引用文献Supramolecular protein cages constructed from a crystalline protein matrix
Chem. Commun. (Camb.), 54, 2018
5YRC
DownloadVisualize
BU of 5yrc by Molmil
Crystal Structure of Oxidized Cypovirus Polyhedra R13A/E73C/Y83C Mutant
分子名称: 1,2-ETHANEDIOL, Polyhedrin
著者Negishi, H, Abe, S, Yamashita, K, Hirata, K, Niwase, K, Boudes, M, Coulibaly, F, Mori, H, Ueno, T.
登録日2017-11-09
公開日2018-02-21
最終更新日2018-03-07
実験手法X-RAY DIFFRACTION (1.67 Å)
主引用文献Supramolecular protein cages constructed from a crystalline protein matrix
Chem. Commun. (Camb.), 54, 2018
5GQK
DownloadVisualize
BU of 5gqk by Molmil
Crystal structure of Cypovirus Polyhedra mutant with deletion of Gly192-Ala194
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, Polyhedrin
著者Abe, S, Tabe, H, Ijiri, H, Yamashita, K, Hirata, K, Mori, H, Ueno, T.
登録日2016-08-07
公開日2017-02-15
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Crystal Engineering of Self-Assembled Porous Protein Materials in Living Cells
ACS Nano, 11, 2017
5GQN
DownloadVisualize
BU of 5gqn by Molmil
Crystal structure of in cellulo Cypovirus Polyhedra mutant with deletion of Gly192-Ala194
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, Polyhedrin
著者Abe, S, Tabe, H, Ijiri, H, Yamashita, K, Hirata, K, Mori, H, Ueno, T.
登録日2016-08-07
公開日2017-02-15
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Crystal Engineering of Self-Assembled Porous Protein Materials in Living Cells
ACS Nano, 11, 2017
5YHB
DownloadVisualize
BU of 5yhb by Molmil
Crystal structure of Pd(allyl)/polyhedra mutant with deletion of Gly192-Ala194
分子名称: PALLADIUM ION, Palladium(II) allyl complex, Polyhedrin
著者Abe, S, Atsumi, K, Yamashita, K, Hirata, K, Mori, H, Ueno, T.
登録日2017-09-27
公開日2017-11-29
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.08 Å)
主引用文献Structure of in cell protein crystals containing organometallic complexes.
Phys Chem Chem Phys, 20, 2018
5GX5
DownloadVisualize
BU of 5gx5 by Molmil
Luciferin-regenerating enzyme collected with serial synchrotron rotational crystallography with accumulated dose of 26 MGy (23rd measurement)
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, GLYCEROL, Luciferin regenerating enzyme, ...
著者Hasegawa, K, Yamashita, K, Murai, T, Nuemket, N, Hirata, K, Ueno, G, Ago, H, Nakatsu, T, Kumasaka, T, Yamamoto, M.
登録日2016-09-15
公開日2017-01-04
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Development of a dose-limiting data collection strategy for serial synchrotron rotation crystallography
J Synchrotron Radiat, 24, 2017
5YR9
DownloadVisualize
BU of 5yr9 by Molmil
Crystal Structure of Cypovirus Polyhedra R13A/E73C/Y83C Mutant
分子名称: 1,2-ETHANEDIOL, Polyhedrin
著者Negishi, H, Abe, S, Yamashita, K, Hirata, K, Niwase, K, Boudes, M, Coulibaly, F, Mori, H, Ueno, T.
登録日2017-11-08
公開日2018-02-21
最終更新日2018-03-07
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Supramolecular protein cages constructed from a crystalline protein matrix
Chem. Commun. (Camb.), 54, 2018
5GX2
DownloadVisualize
BU of 5gx2 by Molmil
Luciferin-regenerating enzyme collected with serial synchrotron rotational crystallography with accumulated dose of 3.4 MGy (3rd measurement)
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, GLYCEROL, Luciferin regenerating enzyme, ...
著者Hasegawa, K, Yamashita, K, Murai, T, Nuemket, N, Hirata, K, Ueno, G, Ago, H, Nakatsu, T, Kumasaka, T, Yamamoto, M.
登録日2016-09-15
公開日2017-01-04
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Development of a dose-limiting data collection strategy for serial synchrotron rotation crystallography
J Synchrotron Radiat, 24, 2017
5GX1
DownloadVisualize
BU of 5gx1 by Molmil
Luciferin-regenerating enzyme collected with serial synchrotron rotational crystallography with accumulated dose of 1.1 MGy (1st measurement)
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, GLYCEROL, Luciferin regenerating enzyme, ...
著者Hasegawa, K, Yamashita, K, Murai, T, Nuemket, N, Hirata, K, Ueno, G, Ago, H, Nakatsu, T, Kumasaka, T, Yamamoto, M.
登録日2016-09-15
公開日2017-01-04
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Development of a dose-limiting data collection strategy for serial synchrotron rotation crystallography
J Synchrotron Radiat, 24, 2017
5GQI
DownloadVisualize
BU of 5gqi by Molmil
Crystal structure of Cypovirus Polyhedra mutant with deletion of Ala194
分子名称: 1,2-ETHANEDIOL, ADENOSINE-5'-TRIPHOSPHATE, CHLORIDE ION, ...
著者Abe, S, Tabe, H, Ijiri, H, Yamashita, K, Hirata, K, Mori, H, Ueno, T.
登録日2016-08-07
公開日2017-02-15
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Crystal Engineering of Self-Assembled Porous Protein Materials in Living Cells
ACS Nano, 11, 2017
5GQL
DownloadVisualize
BU of 5gql by Molmil
Crystal structure of Wild Type Cypovirus Polyhedra
分子名称: 1,2-ETHANEDIOL, ADENOSINE-5'-TRIPHOSPHATE, CHLORIDE ION, ...
著者Abe, S, Tabe, H, Ijiri, H, Yamashita, K, Hirata, K, Mori, H, Ueno, T.
登録日2016-08-07
公開日2017-02-15
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.78 Å)
主引用文献Crystal Engineering of Self-Assembled Porous Protein Materials in Living Cells
ACS Nano, 11, 2017
5YR1
DownloadVisualize
BU of 5yr1 by Molmil
Crystal Structure of Cypovirus Polyhedra R13A/E73C/Y83C/S193C/A194C Mutant
分子名称: 1,2-ETHANEDIOL, Polyhedrin
著者Negishi, H, Abe, S, Yamashita, K, Hirata, K, Niwase, K, Boudes, M, Coulibaly, F, Mori, H, Ueno, T.
登録日2017-11-08
公開日2018-02-21
最終更新日2018-03-07
実験手法X-RAY DIFFRACTION (1.72 Å)
主引用文献Supramolecular protein cages constructed from a crystalline protein matrix
Chem. Commun. (Camb.), 54, 2018
5YRD
DownloadVisualize
BU of 5yrd by Molmil
Crystal Structure of Oxidized Cypovirus Polyhedra R13A/S193C/A194C Mutant
分子名称: 1,2-ETHANEDIOL, Polyhedrin
著者Negishi, H, Abe, S, Yamashita, K, Hirata, K, Niwase, K, Boudes, M, Coulibaly, F, Mori, H, Ueno, T.
登録日2017-11-09
公開日2018-02-21
最終更新日2018-03-07
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Supramolecular protein cages constructed from a crystalline protein matrix
Chem. Commun. (Camb.), 54, 2018

225681

件を2024-10-02に公開中

PDB statisticsPDBj update infoContact PDBjnumon