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PDB: 579 件

4YOC
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Crystal Structure of human DNMT1 and USP7/HAUSP complex
分子名称: DNA (cytosine-5)-methyltransferase 1, Ubiquitin carboxyl-terminal hydrolase 7, ZINC ION
著者Cheng, J, Yang, H, Fang, J, Gong, R, Wang, P, Li, Z, Xu, Y.
登録日2015-03-11
公開日2015-05-27
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.916 Å)
主引用文献Molecular mechanism for USP7-mediated DNMT1 stabilization by acetylation.
Nat Commun, 6, 2015
4Z90
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ELIC bound with the anesthetic isoflurane in the resting state
分子名称: (2R)-2-chloro-2-(difluoromethoxy)-1,1,1-trifluoroethane, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Gamma-aminobutyric-acid receptor subunit beta-1
著者Chen, Q, Kinde, M, Arjunan, P, Cohen, A, Xu, Y, Tang, P.
登録日2015-04-09
公開日2015-09-16
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Direct Pore Binding as a Mechanism for Isoflurane Inhibition of the Pentameric Ligand-gated Ion Channel ELIC.
Sci Rep, 5, 2015
4Z91
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BU of 4z91 by Molmil
ELIC cocrystallized with isofluorane in a desensitized state
分子名称: (2R)-2-chloro-2-(difluoromethoxy)-1,1,1-trifluoroethane, 1.7.6 3-bromanylpropan-1-amine, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, ...
著者Chen, Q, Kinde, M.N, Arjunan, P, Cohen, A, Xu, Y, Tang, P.
登録日2015-04-09
公開日2015-09-16
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (3.3915 Å)
主引用文献Direct Pore Binding as a Mechanism for Isoflurane Inhibition of the Pentameric Ligand-gated Ion Channel ELIC.
Sci Rep, 5, 2015
2GBL
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BU of 2gbl by Molmil
Crystal Structure of Full Length Circadian Clock Protein KaiC with Phosphorylation Sites
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Circadian clock protein kinase kaiC, MAGNESIUM ION
著者Pattanayek, R, Williams, D.R, Pattanayek, S, Xu, Y, Mori, T, Johnson, C.H, Stewart, P.L, Egli, M.
登録日2006-03-10
公開日2007-01-23
最終更新日2021-07-28
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Analysis of KaiA-KaiC protein interactions in the cyano-bacterial circadian clock using hybrid structural methods.
Embo J., 25, 2006
2JST
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BU of 2jst by Molmil
Four-Alpha-Helix Bundle with Designed Anesthetic Binding Pockets II: Halothane Effects on Structure and Dynamics
分子名称: 2-BROMO-2-CHLORO-1,1,1-TRIFLUOROETHANE, Four-Alpha-Helix Bundle
著者Cui, T, Bondarenko, V, Ma, D, Canlas, C, Brandon, N.R, Johansson, J.S, Tang, P, Xu, Y.
登録日2007-07-12
公開日2008-05-27
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Four-alpha-helix bundle with designed anesthetic binding pockets. Part II: halothane effects on structure and dynamics
Biophys.J., 94, 2008
2K3R
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BU of 2k3r by Molmil
Pfu Rpp21 structure and assignments
分子名称: Ribonuclease P protein component 4, ZINC ION
著者Amero, C.D, Foster, M.P, Boomershine, W.P, Xu, Y.
登録日2008-05-15
公開日2008-12-02
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Solution structure of Pyrococcus furiosus RPP21, a component of the archaeal RNase P holoenzyme, and interactions with its RPP29 protein partner.
Biochemistry, 47, 2008
2K1E
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BU of 2k1e by Molmil
NMR studies of a channel protein without membranes: structure and dynamics of water-solubilized KcsA
分子名称: water soluble analogue of potassium channel, KcsA
著者Ma, D, Xu, Y, Tillman, T, Tang, P, Meirovitch, E, Eckenhoff, R, Carnini, A.
登録日2008-02-29
公開日2008-11-11
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献NMR studies of a channel protein without membranes: structure and dynamics of water-solubilized KcsA.
Proc.Natl.Acad.Sci.Usa, 105, 2008
3KYS
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BU of 3kys by Molmil
Crystal structure of human YAP and TEAD complex
分子名称: 65 kDa Yes-associated protein, Transcriptional enhancer factor TEF-1
著者Li, Z, Zhao, B, Wang, P, Chen, F, Dong, Z, Yang, H, Guan, K.L, Xu, Y.
登録日2009-12-07
公開日2010-02-23
最終更新日2020-10-07
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural insights into the YAP and TEAD complex
Genes Dev., 24, 2010
2K58
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BU of 2k58 by Molmil
NMR structures of the first transmembrane domain of the neuronal acetylcholine receptor beta 2 subunit
分子名称: Neuronal acetylcholine receptor subunit beta-2
著者Bondarenko, V, Tang, P, Xu, Y.
登録日2008-06-25
公開日2008-07-08
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Structure of the first transmembrane domain of the neuronal acetylcholine receptor beta 2 subunit
Biophys.J., 92, 2007
2K59
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NMR structures of the second transmembrane domain of the neuronal acetylcholine receptor beta 2 subunit
分子名称: Neuronal acetylcholine receptor subunit beta-2
著者Bondarenko, V, Tang, P, Xu, Y, Yushmanov, V.
登録日2008-06-25
公開日2008-07-08
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献NMR structure and dynamics of the second transmembrane domain of the neuronal acetylcholine receptor beta 2 subunit
Biochemistry, 42, 2003
2KB1
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BU of 2kb1 by Molmil
NMR studies of a channel protein without membrane: structure and dynamics of water-solubilized KcsA
分子名称: WSK3
著者Ma, D, Xu, Y, Tillman, T, Tang, P, Meirovitch, E, Eckenhoff, R, Carnini, A.
登録日2008-11-19
公開日2008-12-09
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献NMR studies of a channel protein without membranes: structure and dynamics of water-solubilized KcsA
Proc.Natl.Acad.Sci.USA, 105, 2008
2KZ1
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BU of 2kz1 by Molmil
Inter-molecular interactions in a 44 kDa interferon-receptor complex detected by asymmetric back-protonation and 2D NOESY
分子名称: Interferon alpha-2, Soluble IFN alpha/beta receptor
著者Nudelman, I, Akabayov, S.R, Schnur, E, Biron, Z, Levy, R, Xu, Y, Yang, D, Anglister, J.
登録日2010-06-10
公開日2010-06-23
最終更新日2021-08-18
実験手法SOLUTION NMR
主引用文献Intermolecular interactions in a 44 kDa interferon-receptor complex detected by asymmetric reverse-protonation and two-dimensional NOESY
Biochemistry, 49, 2010
2KSR
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BU of 2ksr by Molmil
NMR structures of TM domain of the n-Acetylcholine receptor b2 subunit
分子名称: Neuronal acetylcholine receptor subunit beta-2
著者Bondarenko, V, Tillman, T, Xu, Y, Tang, P.
登録日2010-01-12
公開日2010-06-16
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献NMR structure of the transmembrane domain of the n-acetylcholine receptor beta2 subunit.
Biochim.Biophys.Acta, 1798, 2010
2LLY
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BU of 2lly by Molmil
NMR structures of the transmembrane domains of the nAChR a4 subunit
分子名称: Neuronal acetylcholine receptor subunit alpha-4
著者Bondarenko, V, Mowrey, D, Tillman, T, Cui, T, Liu, L.T, Xu, Y, Tang, P.
登録日2011-11-18
公開日2012-03-28
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献NMR structures of the transmembrane domains of the a4b2 nAChR.
Biochim.Biophys.Acta, 1818, 2012
2LM2
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BU of 2lm2 by Molmil
NMR structures of the transmembrane domains of the AChR b2 subunit
分子名称: Neuronal acetylcholine receptor subunit beta-2
著者Bondarenko, V, Mowrey, D, Tillman, T, Cui, T, Liu, L.T, Xu, Y, Tang, P.
登録日2011-11-18
公開日2012-03-28
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献NMR structures of the transmembrane domains of the a4b2 nAChR.
Biochim.Biophys.Acta, 1818, 2012
2MAW
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BU of 2maw by Molmil
NMR structures of the alpha7 nAChR transmembrane domain.
分子名称: Neuronal acetylcholine receptor subunit alpha-7
著者Bondarenko, V, Mowrey, D, Xu, Y, Tang, P.
登録日2013-07-19
公開日2013-11-13
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Insights into distinct modulation of alpha 7 and alpha 7 beta 2 nicotinic acetylcholine receptors by the volatile anesthetic isoflurane.
J.Biol.Chem., 288, 2013
2MC5
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BU of 2mc5 by Molmil
A bacteriophage transcription regulator inhibits bacterial transcription initiation by -factor displacement
分子名称: 45L
著者Liu, B, Shadrin, A, Sheppard, C, Xu, Y, Severinov, K, Matthews, S, Wigneshweraraj, S.
登録日2013-08-14
公開日2014-03-26
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献A bacteriophage transcription regulator inhibits bacterial transcription initiation by sigma-factor displacement.
Nucleic Acids Res., 42, 2014
2MC6
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BU of 2mc6 by Molmil
A bacteriophage transcription regulator inhibits bacterial transcription initiation by sigma-factor displacement
分子名称: DNA-directed RNA polymerase subunit beta', RNA polymerase inhibitor p7
著者Liu, B, Shadrin, A, Sheppard, C, Xu, Y, Severinov, K, Matthews, S, Wigneshweraraj, S.
登録日2013-08-15
公開日2014-04-02
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献A bacteriophage transcription regulator inhibits bacterial transcription initiation by sigma-factor displacement.
Nucleic Acids Res., 42, 2014
2N59
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BU of 2n59 by Molmil
Solution Structure of R. palustris CsgH
分子名称: Putative uncharacterized protein CsgH
著者Hawthorne, W.J, Taylor, J.D, Escalera-Maurer, A, Lambert, S, Koch, M, Scull, N, Sefer, L, Xu, Y, Matthews, S.J.
登録日2015-07-13
公開日2016-05-11
実験手法SOLUTION NMR
主引用文献Electrostatically-guided inhibition of Curli amyloid nucleation by the CsgC-like family of chaperones.
Sci Rep, 6, 2016
2NBA
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BU of 2nba by Molmil
Solution NMR structure of the minor DNA-uptake pilin ComP from Neisseri subflava
分子名称: Prepilin-type cleavage/methylation N-terminal domain protein
著者Berry, J.L, Xu, Y.
登録日2016-02-02
公開日2016-05-18
最終更新日2016-06-29
実験手法SOLUTION NMR
主引用文献A Comparative Structure/Function Analysis of Two Type IV Pilin DNA Receptors Defines a Novel Mode of DNA Binding.
Structure, 24, 2016
3RQW
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BU of 3rqw by Molmil
Crystal structure of acetylcholine bound to a prokaryotic pentameric ligand-gated ion channel, ELIC
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, ACETYLCHOLINE, ELIC Pentameric Ligand Gated Ion Channel from Erwinia Chrysanthemi, ...
著者Pan, J.J, Chen, Q, Yoshida, K, Cohen, A, Kong, X.P, Xu, Y, Tang, P.
登録日2011-04-28
公開日2012-03-07
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.913 Å)
主引用文献Structure of the pentameric ligand-gated ion channel ELIC cocrystallized with its competitive antagonist acetylcholine.
Nat Commun, 3, 2012
3RQU
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Crystal structure of a prokaryotic pentameric ligand-gated ion channel, ELIC
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, ELIC Pentameric Ligand Gated Ion Channel from Erwinia Chrysanthemi, GLYCEROL
著者Pan, J.J, Chen, Q, Yoshida, K, Cohen, A, Kong, X.P, Xu, Y, Tang, P.
登録日2011-04-28
公開日2012-03-07
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (3.089 Å)
主引用文献Structure of the pentameric ligand-gated ion channel ELIC cocrystallized with its competitive antagonist acetylcholine.
Nat Commun, 3, 2012
1VRY
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BU of 1vry by Molmil
Second and Third Transmembrane Domains of the Alpha-1 Subunit of Human Glycine Receptor
分子名称: Glycine receptor alpha-1 chain
著者Ma, D, Liu, Z, Li, L, Tang, P, Xu, Y.
登録日2005-07-20
公開日2005-07-26
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献Structure and Dynamics of the Second and Third Transmembrane Domains of Human Glycine Receptor.
Biochemistry, 44, 2005
8HDV
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BU of 8hdv by Molmil
De novo design cavitated protein without predefined topology
分子名称: De novo design cavitated protein
著者Hu, X, Xu, Y.
登録日2022-11-06
公開日2023-01-18
最終更新日2024-04-24
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献De novo design of cavity-containing proteins with a backbone-centered neural network energy function.
Structure, 32, 2024
8HDU
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BU of 8hdu by Molmil
De novo design cavitated protein without predefined topology
分子名称: De novo design cavitated protein
著者Hu, X, Xu, Y.
登録日2022-11-06
公開日2023-01-18
最終更新日2024-04-24
実験手法X-RAY DIFFRACTION (2.71 Å)
主引用文献De novo design of cavity-containing proteins with a backbone-centered neural network energy function.
Structure, 32, 2024

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