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PDB: 125 results

5H5D
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BU of 5h5d by Molmil
The crystal structure of the yeast arginine methyltransferase SFM1 complexed with MTA
Descriptor: 5'-DEOXY-5'-METHYLTHIOADENOSINE, Protein arginine N-methyltransferase SFM1
Authors:Xie, W, Wang, C, Zeng, J.
Deposit date:2016-11-05
Release date:2017-01-18
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:A flexible cofactor-binding loop in the novel arginine methyltransferase Sfm1.
FEBS Lett., 591, 2017
5X3G
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BU of 5x3g by Molmil
The WT UNG crystal structure from Nitratifractor salsuginis
Descriptor: Uracil-DNA glycosylase
Authors:Xie, W, Cao, W, Chen, R, Zhang, Z.
Deposit date:2017-02-06
Release date:2017-10-18
Last modified:2017-12-13
Method:X-RAY DIFFRACTION (2.021 Å)
Cite:An unconventional family 1 uracil DNA glycosylase in Nitratifractor salsuginis.
FEBS J., 284, 2017
5X3H
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BU of 5x3h by Molmil
The Y81G mutant of the UNG crystal structure from Nitratifractor salsuginis
Descriptor: Uracil-DNA glycosylase
Authors:Xie, W, Chen, R, Cao, W, Zhang, Z.
Deposit date:2017-02-06
Release date:2017-10-18
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:An unconventional family 1 uracil DNA glycosylase in Nitratifractor salsuginis.
FEBS J., 284, 2017
8HVJ
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BU of 8hvj by Molmil
The structure of the E. coli mRNA endoonuclease YiCC
Descriptor: UPF0701 protein YicC
Authors:Xie, W, Hunag, L.
Deposit date:2022-12-27
Release date:2023-12-27
Method:X-RAY DIFFRACTION (4.05 Å)
Cite:The structure of the E. coli mRNA endoonuclease YiCC
To Be Published
5YAC
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BU of 5yac by Molmil
Crystal structure of WT Trm5b from Pyrococcus abyssi
Descriptor: tRNA (guanine(37)-N1)-methyltransferase Trm5b
Authors:Xie, W, Wu, J.
Deposit date:2017-08-31
Release date:2017-09-27
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:The crystal structure of the Pyrococcus abyssi mono-functional methyltransferase PaTrm5b
Biochem. Biophys. Res. Commun., 493, 2017
5Y9O
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BU of 5y9o by Molmil
The apo structure of Legionella pneumophila WipA
Descriptor: IODIDE ION, WipA
Authors:Xie, W, Jia, Q.
Deposit date:2017-08-26
Release date:2018-05-16
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.554 Å)
Cite:Legionella pneumophila effector WipA, a bacterial PPP protein phosphatase with PTP activity
Acta Biochim. Biophys. Sin. (Shanghai), 50, 2018
6A6X
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BU of 6a6x by Molmil
The crystal structure of the Mtb MazE-MazF-mt9 complex
Descriptor: Antitoxin MazE7, Probable endoribonuclease MazF7, SULFATE ION
Authors:Xie, W, Chen, R, Tu, J.
Deposit date:2018-06-29
Release date:2019-07-03
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural and Biochemical Characterization of the Cognate and Heterologous Interactions of the MazEF-mt9 TA System.
Acs Infect Dis., 5, 2019
5XE0
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BU of 5xe0 by Molmil
Crystal structure of EV-D68-3Dpol in complex with GTP
Descriptor: GUANOSINE-5'-TRIPHOSPHATE, Genome polyprotein
Authors:Xie, W, Wang, C, Wang, Z, Li, Q, Wang, C.
Deposit date:2017-03-30
Release date:2017-06-28
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal Structure and Thermostability Characterization of Enterovirus D68 3Dpol
J. Virol., 91, 2017
5X62
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BU of 5x62 by Molmil
Crystal structure of a carnosine N-methyltransferase bound by AdoHcy
Descriptor: Carnosine N-methyltransferase, S-ADENOSYL-L-HOMOCYSTEINE, SODIUM ION
Authors:Xie, W, Liu, X.
Deposit date:2017-02-20
Release date:2017-07-26
Last modified:2017-08-30
Method:X-RAY DIFFRACTION (2.204 Å)
Cite:Substrate Recognition Mechanism of the Putative Yeast Carnosine N-methyltransferase
ACS Chem. Biol., 12, 2017
6IOD
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BU of 6iod by Molmil
The structure of UdgX in complex with single-stranded DNA
Descriptor: DNA, IRON/SULFUR CLUSTER, Phage SPO1 DNA polymerase-related protein
Authors:Xie, W, Tu, J.
Deposit date:2018-10-29
Release date:2019-07-31
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.66 Å)
Cite:Suicide inactivation of the uracil DNA glycosylase UdgX by covalent complex formation.
Nat.Chem.Biol., 15, 2019
6JFP
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BU of 6jfp by Molmil
Crystal structure of the beta-glucosidase Bgl15
Descriptor: beta-D-glucopyranose, beta-glucosidase 15
Authors:Xie, W, Chen, R.
Deposit date:2019-02-11
Release date:2020-02-12
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Engineering of beta-Glucosidase Bgl15 with Simultaneously Enhanced Glucose Tolerance and Thermostability To Improve Its Performance in High-Solid Cellulose Hydrolysis.
J.Agric.Food Chem., 68, 2020
7VWN
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BU of 7vwn by Molmil
The structure of an engineered PET hydrolase
Descriptor: CHLORIDE ION, Poly(ethylene terephthalate) hydrolase
Authors:Xie, W, Jia, Q.
Deposit date:2021-11-11
Release date:2022-11-16
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:An engineered PET hydrolase for biodegradation of microplastics in ocean water
To Be Published
6IOC
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BU of 6ioc by Molmil
The structure of the H109Q mutant of UdgX in complex with uracil
Descriptor: IRON/SULFUR CLUSTER, Phage SPO1 DNA polymerase-related protein, URACIL
Authors:Xie, W, Tu, J.
Deposit date:2018-10-29
Release date:2019-07-24
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.624 Å)
Cite:Suicide inactivation of the uracil DNA glycosylase UdgX by covalent complex formation.
Nat.Chem.Biol., 15, 2019
6IOA
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BU of 6ioa by Molmil
The structure of UdgX in complex with uracil
Descriptor: IRON/SULFUR CLUSTER, Phage SPO1 DNA polymerase-related protein, SULFATE ION, ...
Authors:Xie, W, Tu, J.
Deposit date:2018-10-29
Release date:2019-07-24
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Suicide inactivation of the uracil DNA glycosylase UdgX by covalent complex formation.
Nat.Chem.Biol., 15, 2019
7W1Q
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BU of 7w1q by Molmil
The structure of the Arabidopsis thaliana guanosine deaminase mutant E82Q complexed with 2'-O-methylguanosine
Descriptor: Guanosine deaminase, O2'-METHYLGUANOSINE-5'-MONOPHOSPHATE, ZINC ION
Authors:Xie, W, Jia, Q, Zeng, H.
Deposit date:2021-11-19
Release date:2022-11-23
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Substrate Specificity of GSDA Revealed by Cocrystal Structures and Binding Studies.
Int J Mol Sci, 23, 2022
6IO9
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BU of 6io9 by Molmil
The structure of apo-UdgX
Descriptor: IRON/SULFUR CLUSTER, Phage SPO1 DNA polymerase-related protein, SULFATE ION
Authors:Xie, W, Tu, J.
Deposit date:2018-10-29
Release date:2019-07-24
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Suicide inactivation of the uracil DNA glycosylase UdgX by covalent complex formation.
Nat.Chem.Biol., 15, 2019
6IOB
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BU of 6iob by Molmil
The structure of the H109A mutant of UdgX in complex with uracil
Descriptor: IRON/SULFUR CLUSTER, Phage SPO1 DNA polymerase-related protein, URACIL
Authors:Xie, W, Tu, J.
Deposit date:2018-10-29
Release date:2019-07-24
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.002 Å)
Cite:Suicide inactivation of the uracil DNA glycosylase UdgX by covalent complex formation.
Nat.Chem.Biol., 15, 2019
6L6S
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BU of 6l6s by Molmil
The structure of the UdgX mutant H109E crosslinked to single-stranded DNA
Descriptor: DNA (5'-D(P*TP*GP*(ORP)P*AP*GP*GP*CP*AP*TP*GP*C)-3'), IRON/SULFUR CLUSTER, Phage SPO1 DNA polymerase-related protein
Authors:Xie, W, Tu, J, Zeng, H.
Deposit date:2019-10-29
Release date:2020-11-04
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.06425953 Å)
Cite:Structural insights into an MsmUdgX mutant capable of both crosslinking and uracil excision capability.
DNA Repair (Amst), 97, 2021
6KYT
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BU of 6kyt by Molmil
The structure of the M. tb toxin MazEF-mt1 complex
Descriptor: Antitoxin MazE9, Endoribonuclease MazF9
Authors:Xie, W, Chen, R, Zhou, J.
Deposit date:2019-09-20
Release date:2020-08-05
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.00101161 Å)
Cite:Conserved Conformational Changes in the Regulation ofMycobacterium tuberculosisMazEF-mt1.
Acs Infect Dis., 6, 2020
6L5B
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BU of 6l5b by Molmil
The structure of the UdgX mutant H109E at a post-excision state
Descriptor: IRON/SULFUR CLUSTER, Uracil DNA glycosylase superfamily protein
Authors:Xie, W, Tu, J, Zeng, H.
Deposit date:2019-10-22
Release date:2020-10-28
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.00004983 Å)
Cite:Structural insights into an MsmUdgX mutant capable of both crosslinking and uracil excision capability.
DNA Repair (Amst), 97, 2021
6IJN
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BU of 6ijn by Molmil
The D295N mutant of the N6-methyl-AMP deaminase from Arabidopsis thaliana complexed with N6m-AMP
Descriptor: Adenosine/AMP deaminase family protein, N6-METHYLADENOSINE-5'-MONOPHOSPHATE
Authors:Xie, W, Jia, Q.
Deposit date:2018-10-10
Release date:2019-02-06
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.66 Å)
Cite:Alternative conformation induced by substrate binding for Arabidopsis thalianaN6-methyl-AMP deaminase.
Nucleic Acids Res., 47, 2019
6IER
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BU of 6ier by Molmil
Apo structure of a beta-glucosidase 1317
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, beta-glucosidase 1317
Authors:Xie, W, Liu, X.
Deposit date:2018-09-16
Release date:2019-07-24
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.246 Å)
Cite:Improving the cellobiose-hydrolysis activity and glucose-tolerance of a thermostable beta-glucosidase through rational design.
Int.J.Biol.Macromol., 136, 2019
6IJM
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BU of 6ijm by Molmil
Apo structure of the N6-methyl-AMP Deaminase from Arabidopsis thaliana
Descriptor: Adenosine/AMP deaminase family protein, ZINC ION
Authors:Xie, W, Jia, Q.
Deposit date:2018-10-10
Release date:2019-02-06
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.016 Å)
Cite:Alternative conformation induced by substrate binding for Arabidopsis thalianaN6-methyl-AMP deaminase.
Nucleic Acids Res., 47, 2019
6IJP
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BU of 6ijp by Molmil
The structure of the ADAL-IMP complex
Descriptor: Adenosine/AMP deaminase family protein, INOSINIC ACID, ZINC ION
Authors:Xie, W, Jia, Q.
Deposit date:2018-10-11
Release date:2019-02-06
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Alternative conformation induced by substrate binding for Arabidopsis thalianaN6-methyl-AMP deaminase.
Nucleic Acids Res., 47, 2019
6L94
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BU of 6l94 by Molmil
The structure of the dioxygenase ABH1 from mouse
Descriptor: FE (II) ION, Nucleic acid dioxygenase ALKBH1
Authors:Xie, W, Wang, C, Li, H, Zhang, Y.
Deposit date:2019-11-08
Release date:2020-11-11
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.10012341 Å)
Cite:ALKBH1 promotes lung cancer by regulating m6A RNA demethylation.
Biochem Pharmacol, 189, 2021

226707

数据于2024-10-30公开中

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