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PDB: 275 件

1AF8
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ACTINORHODIN POLYKETIDE SYNTHASE ACYL CARRIER PROTEIN FROM STREPTOMYCES COELICOLOR A3(2), NMR, 24 STRUCTURES
分子名称: ACTINORHODIN POLYKETIDE SYNTHASE ACYL CARRIER PROTEIN
著者Crump, M.P, Crosby, J, Dempsey, C.E, Parkinson, J.A, Murray, M, Hopwood, D.A, Simpson, T.J.
登録日1997-03-23
公開日1997-09-26
最終更新日2024-04-10
実験手法SOLUTION NMR
主引用文献Solution structure of the actinorhodin polyketide synthase acyl carrier protein from Streptomyces coelicolor A3(2).
Biochemistry, 36, 1997
1BN0
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SL3 HAIRPIN FROM THE PACKAGING SIGNAL OF HIV-1, NMR, 11 STRUCTURES
分子名称: SL3 RNA HAIRPIN
著者Pappalardo, L, Kerwood, D.J, Pelczer, I, Borer, P.N.
登録日1998-07-31
公開日1999-04-27
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Three-dimensional folding of an RNA hairpin required for packaging HIV-1.
J.Mol.Biol., 282, 1998
8BFD
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BU of 8bfd by Molmil
Racemic structure of PK-7 (310HD-U2U5)
分子名称: 310HD-U2U5, D-310HD-U2U5, DI(HYDROXYETHYL)ETHER, ...
著者Kumar, P, Paterson, N.G, Woolfson, D.N.
登録日2022-10-25
公開日2022-11-23
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献De novo design of discrete, stable 3 10 -helix peptide assemblies.
Nature, 607, 2022
7RTB
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Peptide-19 bound to the Glucagon-Like Peptide-1 Receptor (GLP-1R)
分子名称: Glucagon-like peptide 1 receptor, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
著者Johnson, R.M, Danev, R, Sexton, P.M, Wootten, D.
登録日2021-08-12
公開日2021-10-06
実験手法ELECTRON MICROSCOPY (2.14 Å)
主引用文献Cryo-EM structure of the dual incretin receptor agonist, peptide-19, in complex with the glucagon-like peptide-1 receptor.
Biochem.Biophys.Res.Commun., 578, 2021
7NFJ
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A heptameric barrel state of a de novo coiled-coil assembly: CC-Type2-(LaId)4-L28Y.
分子名称: CC-Type2-(LaId)4-L28Y
著者Rhys, G.G, Dawson, W.M, Brady, R.L, Woolfson, D.N.
登録日2021-02-07
公開日2022-03-02
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.19 Å)
主引用文献Differential sensing with arrays of de novo designed peptide assemblies.
Nat Commun, 14, 2023
7NFM
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An octameric barrel state of a de novo coiled-coil assembly: CC-Type2-(LaId)4-L21K.
分子名称: CC-Type2-(LaId)4-L21K
著者Rhys, G.G, Dawson, W.M, Brady, R.L, Woolfson, D.N.
登録日2021-02-07
公開日2022-03-02
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Differential sensing with arrays of de novo designed peptide assemblies.
Nat Commun, 14, 2023
7NFP
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A heptameric barrel state of a de novo coiled-coil assembly: CC-Type2-(LaId)4-I17K
分子名称: CC-Type2-(LaId)4-I17K, GLYCEROL
著者Burton, A.J, Rhys, G.G, Dawson, W.M, Brady, R.L, Woolfson, D.N.
登録日2021-02-07
公開日2022-03-02
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.43 Å)
主引用文献Differential sensing with arrays of de novo designed peptide assemblies.
Nat Commun, 14, 2023
7NFG
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A hexameric barrel state of a de novo coiled-coil assembly: CC-Type2-(LaId)4-L14A.
分子名称: (4R)-2-METHYLPENTANE-2,4-DIOL, CC-Type2-(LaId)4-L14A
著者Rhys, G.G, Dawson, W.M, Brady, R.L, Woolfson, D.N.
登録日2021-02-07
公開日2022-03-02
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (1.09 Å)
主引用文献Differential sensing with arrays of de novo designed peptide assemblies.
Nat Commun, 14, 2023
7NFH
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A heptameric barrel state of a de novo coiled-coil assembly: CC-Type2-(MaId)4.
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CC-Type2-(MaId)4
著者Rhys, G.G, Dawson, W.M, Brady, R.L, Woolfson, D.N.
登録日2021-02-07
公開日2022-03-02
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (1.62 Å)
主引用文献Differential sensing with arrays of de novo designed peptide assemblies.
Nat Commun, 14, 2023
7NFN
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A heptameric barrel state of a de novo coiled-coil assembly: CC-Type2-(LaId)4-L21N-I24N.
分子名称: CC-Type2-(LaId)4-L21N-I24N, HEXANE-1,6-DIOL
著者Rhys, G.G, Dawson, W.M, Brady, R.L, Woolfson, D.N.
登録日2021-02-07
公開日2022-03-02
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Differential sensing with arrays of de novo designed peptide assemblies.
Nat Commun, 14, 2023
7RZD
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BU of 7rzd by Molmil
CRYSTAL STRUCTURE OF HLA-B*07:02 IN COMPLEX WITH MLL(747-755) PEPTIDE
分子名称: Beta-2-microglobulin, CHLORIDE ION, GLYCEROL, ...
著者Patskovsky, Y, Patskovska, L, Nyovanie, S, Natarajan, A, Joshi, B, Morin, B, Brittsan, C, Huber, O, Gordon, S, Michelet, X, Schmitzberger, F, Stein, R, Findeis, M, Hurwitz, A, Van Dijk, M, Buell, J, Underwood, D, Krogsgaard, M.
登録日2021-08-27
公開日2022-11-02
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (1.82 Å)
主引用文献Molecular mechanism of phosphopeptide neoantigen immunogenicity.
Nat Commun, 14, 2023
8A09
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BU of 8a09 by Molmil
A hexameric barrel state of a de novo coiled-coil assembly: CC-Type2-(QgLaId)4
分子名称: A hexameric barrel state of a de novo coiled-coil assembly: CC-Type2-(QgLaId)4, GLYCEROL
著者Martin, F.J.O, Rhys, G.G, Dawson, W.M, Woolfson, D.N.
登録日2022-05-27
公開日2022-06-15
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Differential sensing with arrays of de novo designed peptide assemblies.
Nat Commun, 14, 2023
6GWX
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BU of 6gwx by Molmil
Stabilising and Understanding a Miniprotein by Rational Design.
分子名称: Optimised PPa-TYR
著者Porter Goff, K.L, Williams, C, Baker, E.G, Nicol, D, Samphire, J.L, Zieleniewski, F.L, Crump, M.P, Woolfson, D.N.
登録日2018-06-26
公開日2019-07-10
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Stabilizing and Understanding a Miniprotein by Rational Redesign.
Biochemistry, 58, 2019
3IXE
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BU of 3ixe by Molmil
Structural basis of competition between PINCH1 and PINCH2 for binding to the ankyrin repeat domain of integrin-linked kinase
分子名称: Integrin-linked protein kinase, LIM and senescent cell antigen-like-containing domain protein 2, ZINC ION
著者Chiswell, B.P, Stiegler, A.L, Boggon, T.J, Calderwood, D.A.
登録日2009-09-03
公開日2009-12-15
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural basis of competition between PINCH1 and PINCH2 for binding to the ankyrin repeat domain of integrin-linked kinase.
J.Struct.Biol., 170, 2010
7BAT
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BU of 7bat by Molmil
A hexameric barrel state of a de novo coiled-coil assembly: CC-Type2-(GgIaId)4
分子名称: CC-Type2-(GgIaId)4, N-PROPANOL
著者Martin, F.J.O, Dawson, W.M, Shelley, K, Brady, R.L, Woolfson, D.N.
登録日2020-12-16
公開日2021-04-28
最終更新日2021-11-17
実験手法X-RAY DIFFRACTION (1.77 Å)
主引用文献Coiled coils 9-to-5: rational de novo design of alpha-helical barrels with tunable oligomeric states.
Chem Sci, 12, 2021
3F6Q
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BU of 3f6q by Molmil
Crystal structure of integrin-linked kinase ankyrin repeat domain in complex with PINCH1 LIM1 domain
分子名称: IODIDE ION, Integrin-linked protein kinase, LIM and senescent cell antigen-like-containing domain protein 1, ...
著者Chiswell, B.P, Calderwood, D.A, Boggon, T.J.
登録日2008-11-06
公開日2008-12-02
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献The structural basis of integrin-linked kinase-PINCH interactions.
Proc.Natl.Acad.Sci.USA, 105, 2008
6XY1
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Crystal structure of a de novo designed parallel four-helix coiled coil, 4-KE-4.
分子名称: 4-KE-4
著者Edgell, C.L, Savery, N.J, Woolfson, D.N.
登録日2020-01-29
公開日2020-03-18
最終更新日2023-03-08
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献RobustDe Novo-Designed Homotetrameric Coiled Coils.
Biochemistry, 59, 2020
8A3G
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X-ray crystal structure of a de novo designed antiparallel coiled-coil homotetramer with 4 heptad repeats, apCC-Tet*
分子名称: ACETATE ION, SODIUM ION, apCC-Tet*
著者Naudin, E.A, Mylemans, B, Albanese, K.I, Woolfson, D.N.
登録日2022-06-08
公開日2022-10-05
最終更新日2022-11-23
実験手法X-RAY DIFFRACTION (0.96 Å)
主引用文献From peptides to proteins: coiled-coil tetramers to single-chain 4-helix bundles.
Chem Sci, 13, 2022
8A3J
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X-ray crystal structure of a de novo designed antiparallel coiled-coil heterotetramer with 3 heptad repeats, apCC-Tet*3-A2B2
分子名称: apCC-Tet*3-A, apCC-Tet*3-B
著者Naudin, E.A, Mylemans, B, Albanese, K.I, Woolfson, D.N.
登録日2022-06-08
公開日2022-10-05
最終更新日2022-11-23
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献From peptides to proteins: coiled-coil tetramers to single-chain 4-helix bundles.
Chem Sci, 13, 2022
8A3I
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X-ray crystal structure of a de novo designed antiparallel coiled-coil homotetramer with 3 heptad repeats, apCC-Tet*3
分子名称: apCC-Tet*3
著者Naudin, E.A, Mylemans, B, Albanese, K.I, Woolfson, D.N.
登録日2022-06-08
公開日2022-10-05
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.42 Å)
主引用文献From peptides to proteins: coiled-coil tetramers to single-chain 4-helix bundles.
Chem Sci, 13, 2022
8A3K
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X-ray crystal structure of a de novo designed single-chain antiparallel 4-helix coiled-coil bundle, sc-apCC-4
分子名称: sc-apCC-4
著者Albanese, K.I, Mylemans, B, Naudin, E.A, Woolfson, D.N.
登録日2022-06-08
公開日2022-10-05
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献From peptides to proteins: coiled-coil tetramers to single-chain 4-helix bundles.
Chem Sci, 13, 2022
3IXV
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BU of 3ixv by Molmil
Scorpion Hemocyanin resting state pseudo atomic model built based on cryo-EM density map
分子名称: Hemocyanin AA6 chain
著者Cong, Y, Zhang, Q, Woolford, D, Schweikardt, T, Khant, H, Ludtke, S, Chiu, W, Decker, H.
登録日2009-02-13
公開日2009-06-02
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (6.8 Å)
主引用文献Structural Mechanism of SDS-Induced Enzyme Activity of Scorpion Hemocyanin Revealed by Electron Cryomicroscopy.
Structure, 17, 2009
8QAA
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X-ray crystal structure of a de novo designed antiparallel coiled-coil 6-helix bundle with 4 heptad repeats, antiparallel 6-helix bundle-ALIA
分子名称: antiparallel 6-helix bundle-ALIA
著者Albanese, K.I, Petrenas, R, Woolfson, D.N.
登録日2023-08-22
公開日2024-07-03
最終更新日2024-08-07
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Rationally seeded computational protein design of ɑ-helical barrels.
Nat.Chem.Biol., 20, 2024
3IXW
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Scorpion Hemocyanin activated state pseudo atomic model built based on cryo-EM density map
分子名称: Hemocyanin AA6 chain
著者Cong, Y, Zhang, Q, Woolford, D, Schweikardt, T, Khant, H, Ludtke, S, Chiu, W, Decker, H.
登録日2009-02-13
公開日2009-06-02
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (8 Å)
主引用文献Structural Mechanism of SDS-Induced Enzyme Activity of Scorpion Hemocyanin Revealed by Electron Cryomicroscopy.
Structure, 17, 2009
6EIK
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A de novo designed heptameric coiled coil CC-Hept-I24E
分子名称: CC-Hept-I24E, FORMIC ACID, GLYCEROL
著者Rhys, G.G, Burton, A.J, Dawson, W.M, Thomas, F, Woolfson, D.N.
登録日2017-09-19
公開日2018-07-18
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (1.52 Å)
主引用文献De Novo-Designed alpha-Helical Barrels as Receptors for Small Molecules.
ACS Synth Biol, 7, 2018

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