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PDB: 358 results

4ECA
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BU of 4eca by Molmil
ASPARAGINASE FROM E. COLI, MUTANT T89V WITH COVALENTLY BOUND ASPARTATE
Descriptor: L-ASPARAGINE AMIDOHYDROLASE
Authors:Palm, G.J, Lubkowski, J, Wlodawer, A.
Deposit date:1997-02-21
Release date:1997-06-16
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:A covalently bound catalytic intermediate in Escherichia coli asparaginase: crystal structure of a Thr-89-Val mutant.
FEBS Lett., 390, 1996
5N0H
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BU of 5n0h by Molmil
Crystal structure of NDM-1 in complex with hydrolyzed meropenem - new refinement
Descriptor: (2S,3R)-2-[(2S,3R)-1,3-bis(oxidanyl)-1-oxidanylidene-butan-2-yl]-4-[(3S,5S)-5-(dimethylcarbamoyl)pyrrolidin-3-yl]sulfan yl-3-methyl-2,3-dihydro-1H-pyrrole-5-carboxylic acid, GLYCEROL, Metallo-beta-lactamase type 2, ...
Authors:Raczynska, J.E, Shabalin, I.G, Jaskolski, M, Minor, W, Wlodawer, A, King, D.T, Strynadka, N.C.J.
Deposit date:2017-02-03
Release date:2017-04-05
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:A close look onto structural models and primary ligands of metallo-beta-lactamases.
Drug Resist. Updat., 40, 2018
4II0
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BU of 4ii0 by Molmil
Crystal structure of CrataBL, a trypsin inhibitor from Crataeva tapia
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CrataBL, GLYCEROL, ...
Authors:Zhou, D, Wlodawer, A.
Deposit date:2012-12-19
Release date:2013-07-24
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Crystal Structure of Crataeva tapia Bark Protein (CrataBL) and Its Effect in Human Prostate Cancer Cell Lines.
Plos One, 8, 2013
4EXH
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BU of 4exh by Molmil
The crystal structure of xmrv protease complexed with acetyl-pepstatin
Descriptor: ACETYL-PEPSTATIN, FORMIC ACID, Putative gag-pro-pol polyprotein
Authors:Li, M, Wlodawer, A.
Deposit date:2012-04-30
Release date:2012-08-01
Last modified:2017-11-15
Method:X-RAY DIFFRACTION (2 Å)
Cite:Inhibition of XMRV and HIV-1 proteases by pepstatin A and acetyl-pepstatin.
Febs J., 279, 2012
5N0I
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BU of 5n0i by Molmil
Crystal structure of NDM-1 in complex with beta-mercaptoethanol - new refinement
Descriptor: BETA-MERCAPTOETHANOL, CHLORIDE ION, GLYCEROL, ...
Authors:Raczynska, J.E, Shabalin, I.G, Jaskolski, M, Minor, W, Wlodawer, A, King, D.T, Strynadka, N.C.J.
Deposit date:2017-02-03
Release date:2017-04-05
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.47 Å)
Cite:A close look onto structural models and primary ligands of metallo-beta-lactamases.
Drug Resist. Updat., 40, 2018
4J2Y
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Crystal structure of a plant trypsin inhibitor EcTI in complex with bovine trypsin.
Descriptor: Cationic trypsin, SULFATE ION, Trypsin inhibitor
Authors:Zhou, D, Wlodawer, A.
Deposit date:2013-02-05
Release date:2013-05-08
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal Structures of a Plant Trypsin Inhibitor from Enterolobium contortisiliquum (EcTI) and of Its Complex with Bovine Trypsin.
Plos One, 8, 2013
5O9I
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BU of 5o9i by Molmil
Crystal structure of transcription factor IIB Mvu mini-intein
Descriptor: Transcription initiation factor IIB,Transcription initiation factor IIB
Authors:Mikula, K.M, Iwai, H, Li, M, Wlodawer, A.
Deposit date:2017-06-19
Release date:2017-11-01
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural Basis for the Persistence of Homing Endonucleases in Transcription Factor IIB Inteins.
J. Mol. Biol., 429, 2017
5O2E
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BU of 5o2e by Molmil
Crystal structure of NDM-1 in complex with hydrolyzed cefuroxime - new refinement
Descriptor: (2R,5S)-5-[(carbamoyloxy)methyl]-2-[(R)-carboxy{[(2Z)-2-(furan-2-yl)-2-(methoxyimino)acetyl]amino}methyl]-5,6-dihydro-2H-1,3-thiazine-4-carboxylic acid, Metallo-beta-lactamase type 2, SULFATE ION, ...
Authors:Raczynska, J.E, Shabalin, I.G, Jaskolski, M, Minor, W, Wlodawer, A.
Deposit date:2017-05-20
Release date:2018-12-26
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:A close look onto structural models and primary ligands of metallo-beta-lactamases.
Drug Resist. Updat., 40, 2018
5O9J
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BU of 5o9j by Molmil
Crystal structure of transcription factor IIB Mja mini-intein
Descriptor: 1,4-DIETHYLENE DIOXIDE, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, AMMONIUM ION, ...
Authors:Mikula, K.M, Iwai, H, Zhou, D, Wlodawer, A.
Deposit date:2017-06-19
Release date:2017-11-01
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural Basis for the Persistence of Homing Endonucleases in Transcription Factor IIB Inteins.
J. Mol. Biol., 429, 2017
4E2T
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BU of 4e2t by Molmil
Crystal Structures of RadA intein from Pyrococcus horikoshii
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, GLYCEROL, Pho radA intein
Authors:Oeemig, J.S, Zhou, D, Kajander, T, Wlodawer, A, Iwai, H.
Deposit date:2012-03-09
Release date:2012-05-16
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:NMR and Crystal Structures of the Pyrococcus horikoshii RadA Intein Guide a Strategy for Engineering a Highly Efficient and Promiscuous Intein.
J.Mol.Biol., 421, 2012
5O2F
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BU of 5o2f by Molmil
Crystal structure of NDM-1 in complex with hydrolyzed ampicillin - new refinement
Descriptor: (2R,4S)-2-[(R)-{[(2R)-2-amino-2-phenylacetyl]amino}(carboxy)methyl]-5,5-dimethyl-1,3-thiazolidine-4-carboxylic acid, 1,2-ETHANEDIOL, CHLORIDE ION, ...
Authors:Raczynska, J.E, Shabalin, I.G, Jaskolski, M, Minor, W, Wlodawer, A.
Deposit date:2017-05-20
Release date:2018-12-26
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:A close look onto structural models and primary ligands of metallo-beta-lactamases.
Drug Resist. Updat., 40, 2018
4IHZ
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BU of 4ihz by Molmil
Crystal structure of CrataBL, a trypsin inhibitor from Crataeva tapia
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, CrataBL, ...
Authors:Zhou, D, Wlodawer, A.
Deposit date:2012-12-19
Release date:2013-07-24
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal Structure of Crataeva tapia Bark Protein (CrataBL) and Its Effect in Human Prostate Cancer Cell Lines.
Plos One, 8, 2013
4J2K
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BU of 4j2k by Molmil
Crystal structure of a plant trypsin inhibitor EcTI
Descriptor: GLYCEROL, IMIDAZOLE, Trypsin inhibitor
Authors:Zhou, D, Wlodawer, A.
Deposit date:2013-02-04
Release date:2013-05-08
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Crystal Structures of a Plant Trypsin Inhibitor from Enterolobium contortisiliquum (EcTI) and of Its Complex with Bovine Trypsin.
Plos One, 8, 2013
6RIZ
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BU of 6riz by Molmil
Crystal structure of gp41-1 intein (C1A, F65W, D107C)
Descriptor: gp41-1 intein
Authors:Beyer, H.M, Lountos, G.T, Mikula, M.K, Wlodawer, A, Iwai, H.
Deposit date:2019-04-25
Release date:2020-04-29
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:The Convergence of the Hedgehog/Intein Fold in Different Protein Splicing Mechanisms.
Int J Mol Sci, 21, 2020
6U5Z
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BU of 6u5z by Molmil
Cryo-EM structure of E. coli LonA S679A
Descriptor: Lon protease
Authors:Botos, I, Lountos, G.T, Weimin, W, Wlodawer, A.
Deposit date:2019-08-28
Release date:2020-02-26
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Cryo-EM structure of substrate-free E. coli Lon protease provides insights into the dynamics of Lon machinery
Curr Res Struct Biol, 1, 2020
6RIY
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BU of 6riy by Molmil
Crystal structure of MchDnaB-1 intein (N145AA)
Descriptor: CHLORIDE ION, Replicative DNA helicase
Authors:Beyer, H.M, Lountos, G.T, Mikula, M.K, Wlodawer, A, Iwai, H.
Deposit date:2019-04-25
Release date:2020-05-13
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:The Convergence of the Hedgehog/Intein Fold in Different Protein Splicing Mechanisms.
Int J Mol Sci, 21, 2020
6PAE
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BU of 6pae by Molmil
Dickeya chrysanthemi complex with L-Asp at pH 5.6
Descriptor: 1,2-ETHANEDIOL, ASPARTIC ACID, GLYCEROL, ...
Authors:Lubkowski, J, Wlodawer, A.
Deposit date:2019-06-11
Release date:2019-09-04
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Geometric considerations support the double-displacement catalytic mechanism of l-asparaginase.
Protein Sci., 28, 2019
7JOD
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BU of 7jod by Molmil
Crytsal structure of BbKI complexed with Human Kallikrein 4
Descriptor: CADMIUM ION, CHLORIDE ION, Kallikrein 4 (Prostase, ...
Authors:Li, M, Wlodawer, A, Gustchina, A.
Deposit date:2020-08-06
Release date:2021-07-21
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.33 Å)
Cite:Structural studies of complexes of kallikrein 4 with wild-type and mutated forms of the Kunitz-type inhibitor BbKI
Acta Crystallogr.,Sect.D, 77, 2021
7JOW
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BU of 7jow by Molmil
Crystal structure of BbKI complexed with Human Kallikrein 4
Descriptor: CADMIUM ION, CHLORIDE ION, Kallikrein 4 (Prostase, ...
Authors:Li, M, Wlodawer, A, Gustchina, A.
Deposit date:2020-08-07
Release date:2021-07-21
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:Structural studies of complexes of kallikrein 4 with wild-type and mutated forms of the Kunitz-type inhibitor BbKI
Acta Crystallogr.,Sect.D, 77, 2021
7JQO
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BU of 7jqo by Molmil
Crystal structure of the R64D mutant of Bauhinia Bauhinioides Kallikrein Inhibitor complexed with Human Kallikrein 4
Descriptor: CADMIUM ION, CHLORIDE ION, Kallikrein-4, ...
Authors:Li, M, Wlodawer, A, Gustchina, A.
Deposit date:2020-08-11
Release date:2021-07-21
Last modified:2021-08-11
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural studies of complexes of kallikrein 4 with wild-type and mutated forms of the Kunitz-type inhibitor BbKI.
Acta Crystallogr D Struct Biol, 77, 2021
7JOE
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BU of 7joe by Molmil
Crystal structure of BbKI complexed with Human Kallikrein 4
Descriptor: Kallikrein 4 (Prostase, enamel matrix, prostate), ...
Authors:Li, M, Wlodawer, A, Gustchina, A.
Deposit date:2020-08-06
Release date:2021-07-21
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural studies of complexes of kallikrein 4 with wild-type and mutated forms of the Kunitz-type inhibitor BbKI
Acta Crystallogr.,Sect.D, 77, 2021
7JRX
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BU of 7jrx by Molmil
Crystal structure of the R64F mutant of Bauhinia Bauhinioides complexed with Bovine Chymotrypsin
Descriptor: Chymotrypsin A chain A, Chymotrypsin A chain B, Chymotrypsin A chain C, ...
Authors:Li, M, Wlodawer, A, Gustchina, A.
Deposit date:2020-08-13
Release date:2021-07-21
Last modified:2021-08-11
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:Structural studies of complexes of kallikrein 4 with wild-type and mutated forms of the Kunitz-type inhibitor BbKI.
Acta Crystallogr D Struct Biol, 77, 2021
7JQN
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BU of 7jqn by Molmil
Crystal structure of the R64M mutant of Bauhinia Bauhinioides Kallikrein Inhibitor complexed with Human Kallikrein 4
Descriptor: CADMIUM ION, CHLORIDE ION, Kallikrein-4, ...
Authors:Li, M, Wlodawer, A, Gustchina, A.
Deposit date:2020-08-11
Release date:2021-07-21
Last modified:2021-08-11
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural studies of complexes of kallikrein 4 with wild-type and mutated forms of the Kunitz-type inhibitor BbKI.
Acta Crystallogr D Struct Biol, 77, 2021
7JOS
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BU of 7jos by Molmil
Crystal structure of BbKI complexed with Human Kallikrein 4
Descriptor: Kallikrein 4 (Prostase, enamel matrix, prostate), ...
Authors:Li, M, Wlodawer, A, Gustchina, A.
Deposit date:2020-08-07
Release date:2021-07-21
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural studies of complexes of kallikrein 4 with wild-type and mutated forms of the Kunitz-type inhibitor BbKI
Acta Crystallogr.,Sect.D, 77, 2021
6PAC
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BU of 6pac by Molmil
E. coli L-asparaginase II in complex with L-Asp at pH 5.6
Descriptor: ASPARTIC ACID, IMIDAZOLE, L-asparaginase 2
Authors:Lubkowski, J, Wlodawer, A.
Deposit date:2019-06-11
Release date:2019-09-04
Last modified:2019-10-02
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Geometric considerations support the double-displacement catalytic mechanism of l-asparaginase.
Protein Sci., 28, 2019

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