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PDB: 69 results

1LDN
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BU of 1ldn by Molmil
STRUCTURE OF A TERNARY COMPLEX OF AN ALLOSTERIC LACTATE DEHYDROGENASE FROM BACILLUS STEAROTHERMOPHILUS AT 2.5 ANGSTROMS RESOLUTION
Descriptor: 1,6-di-O-phosphono-beta-D-fructofuranose, L-LACTATE DEHYDROGENASE, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
Authors:Wigley, D.B, Gamblin, S.J, Turkenburg, J.P, Dodson, E.J, Piontek, K, Muirhead, H, Holbrook, J.J.
Deposit date:1991-11-19
Release date:1994-01-31
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure of a ternary complex of an allosteric lactate dehydrogenase from Bacillus stearothermophilus at 2.5 A resolution.
J.Mol.Biol., 223, 1992
4V41
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BU of 4v41 by Molmil
E. COLI (LAC Z) BETA-GALACTOSIDASE (NCS CONSTRAINED MONOMER-MONOCLINIC)
Descriptor: BETA-GALACTOSIDASE, MAGNESIUM ION
Authors:Juers, D.H, Jacobson, R.H, Wigley, D, Zhang, X.J, Huber, R.E, Tronrud, D.E, Matthews, B.W.
Deposit date:2000-06-07
Release date:2014-07-09
Last modified:2018-01-31
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:High resolution refinement of beta-galactosidase in a new crystal form reveals multiple metal-binding sites and provides a structural basis for alpha-complementation.
Protein Sci., 9, 2000
3U44
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BU of 3u44 by Molmil
Crystal structure of AddAB-DNA complex
Descriptor: ATP-dependent helicase/deoxyribonuclease subunit B, ATP-dependent helicase/nuclease subunit A, DNA (36-MER), ...
Authors:Saikrishnan, K, Krajewski, W, Wigley, D.
Deposit date:2011-10-07
Release date:2012-03-21
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3.201 Å)
Cite:Insights into Chi recognition from the structure of an AddAB-type helicase-nuclease complex.
Embo J., 31, 2012
2PJR
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BU of 2pjr by Molmil
HELICASE PRODUCT COMPLEX
Descriptor: DNA (5'-D(*AP*CP*TP*GP*C)-3'), DNA (5'-D(*GP*C)-3'), DNA (5'-D(*TP*TP*TP*TP*T)-3'), ...
Authors:Velankar, S.S, Soultanas, P, Dillingham, M.S, Subramanya, H.S, Wigley, D.B.
Deposit date:1999-03-12
Release date:1999-04-08
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Crystal structures of complexes of PcrA DNA helicase with a DNA substrate indicate an inchworm mechanism.
Cell(Cambridge,Mass.), 97, 1999
6T2V
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BU of 6t2v by Molmil
Cryo-EM structure of the RecBCD in complex with Chi-plus2 substrate
Descriptor: DNA (Chi-plus2), RecBCD enzyme subunit RecB, RecBCD enzyme subunit RecC, ...
Authors:Cheng, K, Wilkinson, M, Wigley, D.B.
Deposit date:2019-10-09
Release date:2020-01-01
Last modified:2020-01-22
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:A conformational switch in response to Chi converts RecBCD from phage destruction to DNA repair.
Nat.Struct.Mol.Biol., 27, 2020
6GEN
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BU of 6gen by Molmil
Chromatin remodeller-nucleosome complex at 4.5 A resolution.
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Actin-like protein ARP6, BERYLLIUM TRIFLUORIDE ION, ...
Authors:Willhoft, O, Chua, E.Y.D, Wilkinson, M, Wigley, D.B.
Deposit date:2018-04-27
Release date:2018-10-17
Last modified:2019-12-18
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Structure and dynamics of the yeast SWR1-nucleosome complex.
Science, 362, 2018
6GEJ
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BU of 6gej by Molmil
Chromatin remodeller-nucleosome complex at 3.6 A resolution.
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Actin-like protein ARP6, BERYLLIUM TRIFLUORIDE ION, ...
Authors:Willhoft, O, Chua, E.Y.D, Wilkinson, M, Wigley, D.B.
Deposit date:2018-04-26
Release date:2018-10-17
Last modified:2019-12-11
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Structure and dynamics of the yeast SWR1-nucleosome complex.
Science, 362, 2018
7ZI4
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BU of 7zi4 by Molmil
Cryo-EM structure of the human INO80 complex bound to a WT nucleosome
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Actin-related protein 5, BERYLLIUM TRIFLUORIDE ION, ...
Authors:Vance, N.R, Ayala, R, Willhoft, O, Tvardovskiy, A, McCormack, E.A, Bartke, T, Zhang, X, Wigley, D.B.
Deposit date:2022-04-07
Release date:2023-04-19
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Cryo-EM structure of the human INO80 complex bound to a WT nucleosome
To Be Published
8B1U
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BU of 8b1u by Molmil
RecBCD-DNA in complex with the phage protein Abc2 and host PpiB
Descriptor: Anti-RecBCD protein 2, DNA (70-MER), MAGNESIUM ION, ...
Authors:Wilkinson, M, Wilkinson, O.J, Feyerherm, C, Fletcher, E.E, Wigley, D.B, Dillingham, M.S.
Deposit date:2022-09-12
Release date:2022-12-28
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Structures of RecBCD in complex with phage-encoded inhibitor proteins reveal distinctive strategies for evasion of a bacterial immunity hub.
Elife, 11, 2022
8B1R
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BU of 8b1r by Molmil
RecBCD in complex with the phage protein gp5.9
Descriptor: MAGNESIUM ION, Probable RecBCD inhibitor gp5.9, RecBCD enzyme subunit RecB, ...
Authors:Wilkinson, M, Wilkinson, O.J, Feyerherm, C, Fletcher, E.E, Wigley, D.B, Dillingham, M.S.
Deposit date:2022-09-12
Release date:2022-12-28
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structures of RecBCD in complex with phage-encoded inhibitor proteins reveal distinctive strategies for evasion of a bacterial immunity hub.
Elife, 11, 2022
8B1T
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BU of 8b1t by Molmil
RecBCD-DNA in complex with the phage protein Abc2
Descriptor: Anti-RecBCD protein 2, DNA (70-MER), MAGNESIUM ION, ...
Authors:Wilkinson, M, Wilkinson, O.J, Feyerherm, C, Fletcher, E.E, Wigley, D.B, Dillingham, M.S.
Deposit date:2022-09-12
Release date:2022-12-28
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structures of RecBCD in complex with phage-encoded inhibitor proteins reveal distinctive strategies for evasion of a bacterial immunity hub.
Elife, 11, 2022
5OAF
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BU of 5oaf by Molmil
Human Rvb1/Rvb2 heterohexamer in INO80 complex
Descriptor: ADENOSINE-5'-DIPHOSPHATE, RuvB-like 1, RuvB-like 2
Authors:Aramayo, R.J, Bythell-Douglas, R, Ayala, R, Willhoft, O, Wigley, D, Zhang, X.
Deposit date:2017-06-21
Release date:2017-12-13
Last modified:2019-10-23
Method:ELECTRON MICROSCOPY (4.06 Å)
Cite:Cryo-EM structures of the human INO80 chromatin-remodeling complex.
Nat. Struct. Mol. Biol., 25, 2018
6HTS
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BU of 6hts by Molmil
Cryo-EM structure of the human INO80 complex bound to nucleosome
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Actin-related protein 5, Chromatin-remodeling ATPase INO80, ...
Authors:Ayala, R, Willhoft, O, Aramayo, R.J, Wilkinson, M, McCormack, E.A, Ocloo, L, Wigley, D.B, Zhang, X.
Deposit date:2018-10-04
Release date:2018-11-07
Last modified:2019-12-11
Method:ELECTRON MICROSCOPY (4.8 Å)
Cite:Structure and regulation of the human INO80-nucleosome complex.
Nature, 556, 2018
3U4Q
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BU of 3u4q by Molmil
Structure of AddAB-DNA complex at 2.8 angstroms
Descriptor: 1,2-ETHANEDIOL, ATP-dependent helicase/deoxyribonuclease subunit B, ATP-dependent helicase/nuclease subunit A, ...
Authors:Saikrishnan, K, Krajewski, W, Wigley, D.
Deposit date:2011-10-10
Release date:2012-03-21
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Insights into Chi recognition from the structure of an AddAB-type helicase-nuclease complex.
Embo J., 31, 2012
2IGD
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BU of 2igd by Molmil
ANISOTROPIC STRUCTURE OF PROTEIN G IGG-BINDING DOMAIN III AT 1.1 ANGSTROM RESOLUTION
Descriptor: PROTEIN G
Authors:Butterworth, S, Lamzin, V.L, Wigley, D.B, Derrick, J.P, Wilson, K.S.
Deposit date:1997-04-30
Release date:1998-07-29
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Anisotropic Refinement of a Protein G Domain at 1.1 Angstrom Resolution
To be Published
3PJR
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BU of 3pjr by Molmil
HELICASE SUBSTRATE COMPLEX
Descriptor: 5'-D(*CP*GP*AP*GP*CP*AP*CP*TP*GP*C)-3', 5'-D(*GP*CP*AP*GP*TP*GP*CP*TP*CP*GP*TP*TP*TP*TP*T)-3', ADENOSINE-5'-TRIPHOSPHATE, ...
Authors:Velankar, S.S, Soultanas, P, Dillingham, M.S, Subramanya, H.S, Wigley, D.B.
Deposit date:1999-03-12
Release date:1999-04-08
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Crystal structures of complexes of PcrA DNA helicase with a DNA substrate indicate an inchworm mechanism
Cell(Cambridge,Mass.), 97, 1999
5DMA
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BU of 5dma by Molmil
Crystal structure of C-terminal tudor domain in PcrA/UvrD helicase
Descriptor: ATP-dependent DNA helicase PcrA
Authors:Lin, C.L, Dillingham, M, Wigley, D.
Deposit date:2015-09-08
Release date:2016-09-28
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.53 Å)
Cite:The structure and function of an RNA polymerase interaction domain in the PcrA/UvrD helicase.
Nucleic Acids Res., 45, 2017
6FWS
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BU of 6fws by Molmil
Structure of DinG in complex with ssDNA and ADPBeF
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ATP-dependent DNA helicase DinG, BERYLLIUM TRIFLUORIDE ION, ...
Authors:Cheng, K, Wigley, D.
Deposit date:2018-03-07
Release date:2018-12-19
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:DNA translocation mechanism of an XPD family helicase.
Elife, 7, 2018
3E1S
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BU of 3e1s by Molmil
Structure of an N-terminal truncation of Deinococcus radiodurans RecD2
Descriptor: Exodeoxyribonuclease V, subunit RecD
Authors:Saikrishnan, K, Griffiths, S.P, Cook, N, Court, R, Wigley, D.B.
Deposit date:2008-08-04
Release date:2008-08-19
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:DNA binding to RecD: role of the 1B domain in SF1B helicase activity.
Embo J., 27, 2008
3GPL
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BU of 3gpl by Molmil
Crystal structure of the ternary complex of RecD2 with DNA and ADPNP
Descriptor: 5'-D(*T*TP*TP*TP*TP*TP*TP*T)-3', Exodeoxyribonuclease V, subunit RecD, ...
Authors:Saikrishnan, K, Cook, N, Wigley, D.B.
Deposit date:2009-03-23
Release date:2009-06-16
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Mechanistic basis of 5'-3' translocation in SF1B helicases.
Cell(Cambridge,Mass.), 137, 2009
3K70
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BU of 3k70 by Molmil
Crystal structure of the complete initiation complex of RecBCD
Descriptor: CALCIUM ION, DNA (46-MER), Exodeoxyribonuclease V alpha chain, ...
Authors:Saikrishnan, K, Wigley, D.B.
Deposit date:2009-10-11
Release date:2009-11-10
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (3.59 Å)
Cite:DNA binding to RecD: role of the 1B domain in SF1B helicase activity.
Embo J., 27, 2008
3GP8
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BU of 3gp8 by Molmil
Crystal structure of the binary complex of RecD2 with DNA
Descriptor: 5'-D(*TP*TP*TP*TP*TP*T*TP*TP*TP*TP*TP*TP*TP*T)-3', Exodeoxyribonuclease V, subunit RecD, ...
Authors:Saikrishnan, K, Cook, N, Wigley, D.B.
Deposit date:2009-03-23
Release date:2009-06-16
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Mechanistic basis of 5'-3' translocation in SF1B helicases.
Cell(Cambridge,Mass.), 137, 2009
5MBV
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BU of 5mbv by Molmil
Cryo-EM structure of Lambda Phage protein GamS bound to RecBCD.
Descriptor: Host-nuclease inhibitor protein gam, RecBCD enzyme subunit RecB, RecBCD enzyme subunit RecC, ...
Authors:Wilkinson, M, Chaban, Y, Wigley, D.B.
Deposit date:2016-11-08
Release date:2017-01-11
Last modified:2019-10-23
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Structural basis for the inhibition of RecBCD by Gam and its synergistic antibacterial effect with quinolones.
Elife, 5, 2016
6FWR
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BU of 6fwr by Molmil
Structure of DinG in complex with ssDNA
Descriptor: ATP-dependent DNA helicase DinG, DNA (5'-D(*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*T)-3'), IRON/SULFUR CLUSTER
Authors:Cheng, K, Wigley, D.B.
Deposit date:2018-03-07
Release date:2018-12-19
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:DNA translocation mechanism of an XPD family helicase.
Elife, 7, 2018
5LD2
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BU of 5ld2 by Molmil
Cryo-EM structure of RecBCD+DNA complex revealing activated nuclease domain
Descriptor: Fork-Hairpin DNA (70-MER), MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
Authors:Wilkinson, M, Chaban, Y, Wigley, D.B.
Deposit date:2016-06-23
Release date:2016-10-05
Last modified:2019-12-11
Method:ELECTRON MICROSCOPY (3.83 Å)
Cite:Mechanism for nuclease regulation in RecBCD.
Elife, 5, 2016

 

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