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PDB: 238 results

1SQ7
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Understanding protein lids: Structural analysis of active hinge mutants in triosephosphate isomerase
Descriptor: Triosephosphate isomerase
Authors:Kursula, I, Salin, M, Sun, J, Norledge, B.V, Haapalainen, A.M, Sampson, N.S, Wierenga, R.K.
Deposit date:2004-03-18
Release date:2004-08-24
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Understanding protein lids: structural analysis of active hinge mutants in triosephosphate isomerase
Protein Eng.Des.Sel., 17, 2004
1SW0
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Triosephosphate isomerase from Gallus gallus, loop 6 hinge mutant K174L, T175W
Descriptor: 2-PHOSPHOGLYCOLIC ACID, Triosephosphate isomerase
Authors:Kursula, I, Salin, M, Sun, J, Norledge, B.V, Haapalainen, A.M, Sampson, N.S, Wierenga, R.K.
Deposit date:2004-03-30
Release date:2004-08-24
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.71 Å)
Cite:Understanding protein lids: structural analysis of active hinge mutants in triosephosphate isomerase
Protein Eng.Des.Sel., 17, 2004
1SW3
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Triosephosphate isomerase from Gallus gallus, loop 6 mutant T175V
Descriptor: 2-PHOSPHOGLYCOLIC ACID, Triosephosphate isomerase
Authors:Kursula, I, Salin, M, Sun, J, Norledge, B.V, Haapalainen, A.M, Sampson, N.S, Wierenga, R.K.
Deposit date:2004-03-30
Release date:2004-08-24
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:Understanding protein lids: structural analysis of active hinge mutants in triosephosphate isomerase
Protein Eng.Des.Sel., 17, 2004
1SSD
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BU of 1ssd by Molmil
Understanding protein lids: Structural analysis of active hinge mutants in triosephosphate isomerase
Descriptor: SULFATE ION, Triosephosphate isomerase
Authors:Kursula, I, Salin, M, Sun, J, Norledge, B.V, Haapalainen, A.M, Sampson, N.S, Wierenga, R.K.
Deposit date:2004-03-24
Release date:2004-08-24
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Understanding protein lids: structural analysis of active hinge mutants in triosephosphate isomerase
Protein Eng.Des.Sel., 17, 2004
1SU5
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BU of 1su5 by Molmil
Understanding protein lids: Structural analysis of active hinge mutants in triosephosphate isomerase
Descriptor: 2-PHOSPHOGLYCOLIC ACID, GLYCEROL, SULFATE ION, ...
Authors:Kursula, I, Salin, M, Sun, J, Norledge, B.V, Haapalainen, A.M, Sampson, N.S, Wierenga, R.K.
Deposit date:2004-03-26
Release date:2004-08-24
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Understanding protein lids: structural analysis of active hinge mutants in triosephosphate isomerase
Protein Eng.Des.Sel., 17, 2004
1SW7
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Triosephosphate isomerase from Gallus gallus, loop 6 mutant K174N, T175S, A176S
Descriptor: 2-PHOSPHOGLYCOLIC ACID, Triosephosphate isomerase
Authors:Kursula, I, Salin, M, Sun, J, Norledge, B.V, Haapalainen, A.M, Sampson, N.S, Wierenga, R.K.
Deposit date:2004-03-30
Release date:2004-08-24
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.22 Å)
Cite:Understanding protein lids: structural analysis of active hinge mutants in triosephosphate isomerase
Protein Eng.Des.Sel., 17, 2004
1SSG
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BU of 1ssg by Molmil
Understanding protein lids: Structural analysis of active hinge mutants in triosephosphate isomerase
Descriptor: 2-PHOSPHOGLYCOLIC ACID, GLYCEROL, SULFATE ION, ...
Authors:Kursula, I, Salin, M, Sun, J, Norledge, B.V, Haapalainen, A.M, Sampson, N.S, Wierenga, R.K.
Deposit date:2004-03-24
Release date:2004-08-24
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Understanding protein lids: structural analysis of active hinge mutants in triosephosphate isomerase
Protein Eng.Des.Sel., 17, 2004
1N55
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0.83A resolution structure of the E65Q mutant of Leishmania mexicana triosephosphate isomerase complexed with 2-phosphoglycolate
Descriptor: 2-PHOSPHOGLYCOLIC ACID, ACETIC ACID, GLYCEROL, ...
Authors:Kursula, I, Wierenga, R.K.
Deposit date:2002-11-04
Release date:2003-01-21
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (0.83 Å)
Cite:Crystal structure of triosephosphate isomerase complexed with 2-phosphoglycolate at 0.83-A resolution
J.Biol.Chem., 278, 2003
1TJ7
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BU of 1tj7 by Molmil
Structure determination and refinement at 2.44 A resolution of Argininosuccinate lyase from E. coli
Descriptor: Argininosuccinate lyase, GLYCEROL, PHOSPHATE ION
Authors:Bhaumik, P, Koski, M.K, Bergman, U, Wierenga, R.K.
Deposit date:2004-06-03
Release date:2004-10-26
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.44 Å)
Cite:Structure determination and refinement at 2.44 A resolution of argininosuccinate lyase from Escherichia coli.
Acta Crystallogr.,Sect.D, 60, 2004
1DLU
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BU of 1dlu by Molmil
UNLIGANDED BIOSYNTHETIC THIOLASE FROM ZOOGLOEA RAMIGERA
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, BIOSYNTHETIC THIOLASE, SULFATE ION
Authors:Modis, Y, Wierenga, R.K.
Deposit date:1999-12-12
Release date:2000-04-24
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Crystallographic analysis of the reaction pathway of Zoogloea ramigera biosynthetic thiolase.
J.Mol.Biol., 297, 2000
1DM3
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ACETYLATED BIOSYNTHETIC THIOLASE FROM ZOOGLOEA RAMIGERA IN COMPLEX WITH ACETYL-COA
Descriptor: ACETYL COENZYME *A, BIOSYNTHETIC THIOLASE ACETYLATED AT CYS89, SULFATE ION
Authors:Modis, Y, Wierenga, R.K.
Deposit date:1999-12-13
Release date:2001-08-29
Last modified:2017-10-04
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystallographic analysis of the reaction pathway of Zoogloea ramigera biosynthetic thiolase.
J.Mol.Biol., 297, 2000
1DLV
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BIOSYNTHETIC THIOLASE FROM ZOOGLOEA RAMIGERA IN COMPLEX WITH COA
Descriptor: BIOSYNTHETIC THIOLASE, COENZYME A, SULFATE ION
Authors:Modis, Y, Wierenga, R.K.
Deposit date:1999-12-12
Release date:2000-04-24
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.29 Å)
Cite:Crystallographic analysis of the reaction pathway of Zoogloea ramigera biosynthetic thiolase.
J.Mol.Biol., 297, 2000
1E2X
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BU of 1e2x by Molmil
FadR, fatty acid responsive transcription factor from E. coli
Descriptor: FATTY ACID METABOLISM REGULATOR PROTEIN, SULFATE ION
Authors:Van Aalten, D.M.F, Dirusso, C.C, Knudsen, J, Wierenga, R.K.
Deposit date:2000-05-30
Release date:2000-12-03
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal Structure of Fadr, a Fatty Acid-Responsive Transcription Factor with a Novel Acyl Coenzyme A-Binding Fold
Embo J., 19, 2000
2X58
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The crystal structure of MFE1 liganded with CoA
Descriptor: ADENOSINE-5'-DIPHOSPHATE, COENZYME A, GLYCEROL, ...
Authors:Kasaragod, P, Venkatesan, R, Kiema, T.R, Hiltunen, J.K, Wierenga, R.K.
Deposit date:2010-02-05
Release date:2010-05-12
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:The Crystal Structure of Liganded Rat Peroxisomal Multifunctional Enzyme Type 1: A Flexible Molecule with Two Interconnected Active Sites
J.Biol.Chem., 285, 2010
2WL6
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BU of 2wl6 by Molmil
BIOSYNTHETIC THIOLASE FROM Z. RAMIGERA. THE N316H-H348N MUTANT.
Descriptor: ACETYL-COA ACETYLTRANSFERASE
Authors:Merilainen, G, Poikela, V, Kursula, P, Wierenga, R.K.
Deposit date:2009-06-22
Release date:2009-11-03
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.98 Å)
Cite:The Thiolase Reaction Mechanism: The Importance of Asn316 and His348 for Stabilizing the Enolate Intermediate of the Claisen Condensation.
Biochemistry, 48, 2009
1TTI
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BU of 1tti by Molmil
THREE NEW CRYSTAL STRUCTURES OF POINT MUTATION VARIANTS OF MONOTIM: CONFORMATIONAL FLEXIBILITY OF LOOP-1,LOOP-4 AND LOOP-8
Descriptor: 2-PHOSPHOGLYCOLIC ACID, TRIOSEPHOSPHATE ISOMERASE
Authors:Radha Kishan, K.V, Wierenga, R.K.
Deposit date:1995-04-19
Release date:1995-10-15
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Three new crystal structures of point mutation variants of monoTIM: conformational flexibility of loop-1, loop-4 and loop-8.
Structure, 3, 1995
2VU1
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Biosynthetic thiolase from Z. ramigera. Complex of with O-pantheteine- 11-pivalate.
Descriptor: ACETYL-COA ACETYLTRANSFERASE, PANTOTHENYL-AMINOETHANOL-11-PIVALIC ACID, SODIUM ION, ...
Authors:Kursula, P, Schmitz, W, Wierenga, R.K.
Deposit date:2008-05-19
Release date:2008-10-28
Last modified:2019-07-24
Method:X-RAY DIFFRACTION (1.51 Å)
Cite:The Sulfur Atoms of the Substrate Coa and the Catalytic Cysteine are Required for a Productive Mode of Substrate Binding in Bacterial Biosynthetic Thiolase, a Thioester-Dependent Enzyme.
FEBS J., 275, 2008
2VU0
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BU of 2vu0 by Molmil
Biosynthetic thiolase from Z. ramigera. Complex of the oxidised enzyme with coenzyme A.
Descriptor: Acetyl-CoA acetyltransferase, COENZYME A, GLYCEROL, ...
Authors:Kursula, P, Wierenga, R.K.
Deposit date:2008-05-19
Release date:2008-10-28
Last modified:2019-07-24
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:The sulfur atoms of the substrate CoA and the catalytic cysteine are required for a productive mode of substrate binding in bacterial biosynthetic thiolase, a thioester-dependent enzyme.
FEBS J., 275, 2008
2VU2
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Biosynthetic thiolase from Z. ramigera. Complex with S-pantetheine-11- pivalate.
Descriptor: (3R)-3-hydroxy-2,2-dimethyl-4-oxo-4-({3-oxo-3-[(2-sulfanylethyl)amino]propyl}amino)butyl 2,2-dimethylpropanoate, ACETYL-COA ACETYLTRANSFERASE, SULFATE ION
Authors:Kursula, P, Merilainen, G, Schmitz, W, Wierenga, R.K.
Deposit date:2008-05-19
Release date:2008-10-28
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:The Sulfur Atoms of the Substrate Coa and the Catalytic Cysteine are Required for a Productive Mode of Substrate Binding in Bacterial Biosynthetic Thiolase, a Thioester-Dependent Enzyme.
FEBS J., 275, 2008
2VTZ
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BU of 2vtz by Molmil
Biosynthetic thiolase from Z. ramigera. Complex of the C89A mutant with coenzyme A.
Descriptor: ACETYL-COA ACETYLTRANSFERASE, COENZYME A, SULFATE ION
Authors:Kursula, P, Merilainen, G, Wierenga, R.K.
Deposit date:2008-05-19
Release date:2008-10-28
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The Sulfur Atoms of the Substrate Coa and the Catalytic Cysteine are Required for a Productive Mode of Substrate Binding in Bacterial Biosynthetic Thiolase, a Thioester-Dependent Enzyme.
FEBS J., 275, 2008
2V4A
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Crystal structure of the SeMet-labeled prolyl-4 hydroxylase (P4H) type I from green algae Chlamydomonas reinhardtii.
Descriptor: CHLORIDE ION, DIMETHYL SULFOXIDE, GLYCEROL, ...
Authors:Koski, M.K, Hieta, R, Bollner, C, Kivirikko, K.I, Myllyharju, J, Wierenga, R.K.
Deposit date:2007-06-28
Release date:2007-10-30
Last modified:2019-07-24
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:The Active Site of an Algal Prolyl 4-Hydroxylase Has a Large Structural Plasticity.
J.Biol.Chem., 282, 2007
2V0T
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The A178L mutation in the C-terminal hinge of the flexible loop-6 of triosephosphate isomerase (TIM) induces a more closed conformation of this hinge region in dimeric and monomeric TIM
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, SULFATE ION, TRIOSEPHOSPHATE ISOMERASE GLYCOSOMAL
Authors:Alahuhta, M, Casteleijn, M.G, Neubauer, P, Wierenga, R.K.
Deposit date:2007-05-18
Release date:2008-02-19
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural studies show that the A178L mutation in the C-terminal hinge of the catalytic loop-6 of triosephosphate isomerase (TIM) induces a closed-like conformation in dimeric and monomeric TIM.
Acta Crystallogr. D Biol. Crystallogr., 64, 2008
2VEK
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Structure-based enzyme engineering efforts with an inactive monomeric TIM variant: the importance of a single point mutation for generating an active site with suitable binding properties
Descriptor: 3-(BUTYLSULPHONYL)-PROPANOIC ACID, CITRIC ACID, TERTIARY-BUTYL ALCOHOL, ...
Authors:Alahuhta, M, Salin, M, Casteleijn, M.G, Kemmer, C, El-Sayed, I, Augustyns, K, Neubauer, P, Wierenga, R.K.
Deposit date:2007-10-24
Release date:2008-02-19
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structure-Based Protein Engineering Efforts with a Monomeric Tim Variant: The Importance of a Single Point Mutation for Generating an Active Site with Suitable Binding Properties.
Protein Eng.Des.Sel., 21, 2008
2VEN
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Structure-based enzyme engineering efforts with an inactive monomeric TIM variant: the importance of a single point mutation for generating an active site with suitable binding properties
Descriptor: CITRIC ACID, GLYCOSOMAL TRIOSEPHOSPHATE ISOMERASE
Authors:Alahuhta, M, Salin, M, Casteleijn, M.G, Kemmer, C, El-Sayed, I, Augustyns, K, Neubauer, P, Wierenga, R.K.
Deposit date:2007-10-25
Release date:2008-02-19
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure-Based Protein Engineering Efforts with a Monomeric Tim Variant: The Importance of a Single Point Mutation for Generating an Active Site with Suitable Binding Properties.
Protein Eng.Des.Sel., 21, 2008
2V2C
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The A178L mutation in the C-terminal hinge of the flexible loop-6 of triosephosphate isomerase (TIM) induces a more closed conformation of this hinge region in dimeric and monomeric TIM
Descriptor: 2-PHOSPHOGLYCOLIC ACID, SULFATE ION, TRIOSEPHOSPHATE ISOMERASE GLYCOSOMAL
Authors:Alahuhta, M, Casteleijn, M.G, Neubauer, P, Wierenga, R.K.
Deposit date:2007-06-05
Release date:2008-02-19
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Structural Studies Show that the A178L Mutation in the C-Terminal Hinge of the Catalytic Loop-6 of Triosephosphate Isomerase (Tim) Induces a Closed-Like Conformation in Dimeric and Monomeric Tim.
Acta Crystallogr.,Sect.D, 64, 2008

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数据于2024-07-17公开中

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