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PDB: 44 results

5NLM
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BU of 5nlm by Molmil
Complex between a UDP-glucosyltransferase from Polygonum tinctorium capable of glucosylating indoxyl and indoxyl sulfate
Descriptor: 3-SULFOOXY-1H-INDOLE, MAGNESIUM ION, indoxyl UDP-glucosyltransferase
Authors:Welner, D.H, Hsu, T, Dueber, J, Adams, P.D.
Deposit date:2017-04-04
Release date:2018-01-31
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.14 Å)
Cite:Employing a biochemical protecting group for a sustainable indigo dyeing strategy.
Nat. Chem. Biol., 14, 2018
3SWM
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BU of 3swm by Molmil
The NAC domain of ANAC019 in complex with DNA, gold derivative
Descriptor: GOLD ION, NAC domain-containing protein 19, oligonucleotide forward, ...
Authors:Welner, D, Lo Leggio, L.
Deposit date:2011-07-14
Release date:2012-04-11
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (4.25 Å)
Cite:DNA binding by the plant-specific NAC transcription factors in crystal and solution: a firm link to WRKY and GCM transcription factors.
Biochem.J., 444, 2012
3SWP
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BU of 3swp by Molmil
ANAC019 NAC domain in complex with DNA
Descriptor: NAC domain-containing protein 19, oligonucleotide forward, oligonucleotide reverse
Authors:Welner, D, Lo Leggio, L.
Deposit date:2011-07-14
Release date:2012-04-11
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (4.113 Å)
Cite:DNA binding by the plant-specific NAC transcription factors in crystal and solution: a firm link to WRKY and GCM transcription factors.
Biochem.J., 444, 2012
2GFT
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BU of 2gft by Molmil
Crystal structure of the E263A nucleophile mutant of Bacillus licheniformis endo-beta-1,4-galactanase in complex with galactotriose
Descriptor: CALCIUM ION, Glycosyl Hydrolase Family 53, beta-D-galactopyranose-(1-4)-beta-D-galactopyranose-(1-4)-beta-D-galactopyranose
Authors:Welner, D, Le Nours, J, De Maria, L, Jorgensen, C.T, Christensen, L.L.H, Larsen, S, Lo Leggio, L.
Deposit date:2006-03-23
Release date:2006-06-13
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Oligosaccharide binding of Bacillus licheniformis endo-beta-1,4-galactanase
To be Published
7R2X
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BU of 7r2x by Molmil
Paradendryphiella salina PL8 mannuronate-specific alginate lyase
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Mannuronic acid specific lyase
Authors:Fredslung, F, Welner, D.H, Wilkens, C.
Deposit date:2022-02-06
Release date:2023-02-15
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (3.35 Å)
Cite:Paradendryphiella salina PL8 mannuronate-specific alginate lyase
To Be Published
6QPS
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BU of 6qps by Molmil
Structural characterization of a mannuronic acid specific polysaccharide family 6 lyase enzyme from human gut microbiota
Descriptor: ACETATE ION, CALCIUM ION, Polysaccharide Lyase Family 6
Authors:Fredslund, F, Stender, E.G.P, Svensson, B, Welner, D.H.
Deposit date:2019-02-14
Release date:2019-09-25
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.287 Å)
Cite:Structural and functional aspects of mannuronic acid-specific PL6 alginate lyase from the human gut microbeBacteroides cellulosilyticus.
J.Biol.Chem., 294, 2019
7ZF0
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BU of 7zf0 by Molmil
Crystal structure of UGT85B1 from Sorghum bicolor in complex with UDP and p-hydroxymandelonitrile
Descriptor: (2S)-HYDROXY(4-HYDROXYPHENYL)ETHANENITRILE, 1,2-ETHANEDIOL, Cyanohydrin beta-glucosyltransferase, ...
Authors:Putkaradze, N, Fredslund, F, Welner, D.H.
Deposit date:2022-03-31
Release date:2022-07-13
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structure-guided engineering of key amino acids in UGT85B1 controlling substrate and stereo-specificity in aromatic cyanogenic glucoside biosynthesis.
Plant J., 111, 2022
7ZER
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BU of 7zer by Molmil
Crystal structure of UGT85B1 from Sorghum bicolor in complex with UDP
Descriptor: 1,2-ETHANEDIOL, Cyanohydrin beta-glucosyltransferase, URIDINE-5'-DIPHOSPHATE
Authors:Putkaradze, N, Fredslund, F, Welner, D.H.
Deposit date:2022-03-31
Release date:2022-07-13
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.42 Å)
Cite:Structure-guided engineering of key amino acids in UGT85B1 controlling substrate and stereo-specificity in aromatic cyanogenic glucoside biosynthesis.
Plant J., 111, 2022
4DUL
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BU of 4dul by Molmil
ANAC019 NAC domain crystal form IV
Descriptor: NAC domain-containing protein 19
Authors:Lo Leggio, L, Helgstrand, C, Welner, D, Olsen, A.N, Skriver, K.
Deposit date:2012-02-22
Release date:2012-04-11
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:DNA binding by the plant-specific NAC transcription factors in crystal and solution: a firm link to WRKY and GCM transcription factors.
Biochem.J., 444, 2012
2CCR
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BU of 2ccr by Molmil
Structure of Beta-1,4-Galactanase
Descriptor: CALCIUM ION, TRIETHYLENE GLYCOL, YVFO, ...
Authors:Le Nours, J, De Maria, L, Welner, D, Jorgensen, C.T, Christensen, L.L.H, Larsen, S, Lo Leggio, L.
Deposit date:2006-01-18
Release date:2006-03-21
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Investigating the Binding of Beta-1,4-Galactan to Bacillus Licheniformis Beta-1,4-Galactanase by Crystallography and Computational Modeling.
Proteins, 75, 2009
7ZNP
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BU of 7znp by Molmil
Structure of AmedSP
Descriptor: CHLORIDE ION, MAGNESIUM ION, Sucrose phosphorylase
Authors:Fredslund, F, Teze, D, Welner, D.H.
Deposit date:2022-04-21
Release date:2023-05-10
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structure of AmedSP
To Be Published
7ZYB
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BU of 7zyb by Molmil
BeKdgF with Ca
Descriptor: CALCIUM ION, Cupin, GLYCEROL
Authors:Fredslund, F, Teze, D, Welner, D.H.
Deposit date:2022-05-24
Release date:2023-06-14
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:BeKdgF with Ca
To Be Published
7ZYC
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BU of 7zyc by Molmil
BeKdgF with Zn
Descriptor: Cupin, GLYCEROL, ZINC ION
Authors:Fredslund, F, Teze, D, Welner, D.H.
Deposit date:2022-05-24
Release date:2023-06-14
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2 Å)
Cite:BeKdgF with Ca
To Be Published
6YJI
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BU of 6yji by Molmil
Structure of FgCelDH7C
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, ...
Authors:Haddad Momeni, M, Fredslund, F, Berrin, J.G, Abou Hachem, M, Welner, D.H.
Deposit date:2020-04-03
Release date:2021-03-03
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.64 Å)
Cite:Discovery of fungal oligosaccharide-oxidising flavo-enzymes with previously unknown substrates, redox-activity profiles and interplay with LPMOs.
Nat Commun, 12, 2021
6YJO
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BU of 6yjo by Molmil
Structure of FgChi7B
Descriptor: FAD-binding PCMH-type domain-containing protein, FLAVIN-ADENINE DINUCLEOTIDE, beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Haddad Momeni, M, Fredslund, F, Berrin, J.G, Abou Hachem, M, Welner, D.H.
Deposit date:2020-04-04
Release date:2021-03-03
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.38 Å)
Cite:Discovery of fungal oligosaccharide-oxidising flavo-enzymes with previously unknown substrates, redox-activity profiles and interplay with LPMOs.
Nat Commun, 12, 2021
3EII
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BU of 3eii by Molmil
Zinc-bound glycoside hydrolase 61 E from Thielavia terrestris
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, SULFATE ION, ...
Authors:Salbo, R, Welner, D, Lo Leggio, L, Harris, P, McFarland, K.
Deposit date:2008-09-16
Release date:2009-10-27
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Stimulation of lignocellulosic biomass hydrolysis by proteins of glycoside hydrolase family 61: structure and function of a large, enigmatic family.
Biochemistry, 49, 2010
7Q3S
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BU of 7q3s by Molmil
Crystal structure of UGT706F8 from Zea mays
Descriptor: Glycosyltransferase, URIDINE-5'-DIPHOSPHATE
Authors:Fredslund, F, Bidart, G.N, Welner, D.H.
Deposit date:2021-10-28
Release date:2022-05-04
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.59 Å)
Cite:Family 1 Glycosyltransferase UGT706F8 from Zea mays Selectively Catalyzes the Synthesis of Silibinin 7- O -beta-d-Glucoside.
Acs Sustain Chem Eng, 10, 2022
3EJA
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BU of 3eja by Molmil
Magnesium-bound glycoside hydrolase 61 isoform E from Thielavia terrestris
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, MAGNESIUM ION, ...
Authors:Salbo, R, Welner, D, Lo Leggio, L, Harris, P, McFarland, K.
Deposit date:2008-09-18
Release date:2009-10-27
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.902 Å)
Cite:Stimulation of lignocellulosic biomass hydrolysis by proteins of glycoside hydrolase family 61: structure and function of a large, enigmatic family.
Biochemistry, 49, 2010
2J74
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BU of 2j74 by Molmil
Structure of Beta-1,4-Galactanase
Descriptor: CALCIUM ION, YVFO, beta-D-galactopyranose-(1-4)-beta-D-galactopyranose, ...
Authors:Le Nours, J, De Maria, L, Welner, D, Jorgensen, C.T, Christensen, L.L.H, Larsen, S, Lo Leggio, L.
Deposit date:2006-10-06
Release date:2007-12-18
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Investigating the Binding of Beta-1,4-Galactan to Bacillus Licheniformis Beta-1,4-Galactanase by Crystallography and Computational Modeling.
Proteins, 75, 2009
8CHD
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BU of 8chd by Molmil
NtUGT1 in two conformations
Descriptor: 1,2-ETHANEDIOL, GLYCEROL, Glycosyltransferase, ...
Authors:Fredslund, F, Teze, D, Adams, P.D, Welner, D.H.
Deposit date:2023-02-07
Release date:2024-02-21
Method:X-RAY DIFFRACTION (2.34 Å)
Cite:NtUGT1 in two conformations
To Be Published
6YWF
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BU of 6ywf by Molmil
Crystal structure of Paradendryphiella salina PL7A alginate lyase
Descriptor: Alginate lyase (PL7)
Authors:Wilkens, C, Fredslund, F, Welner, D.H.
Deposit date:2020-04-29
Release date:2021-05-12
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of Paradendryphiella salina PL7A alginate lyase
To Be Published
8CID
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BU of 8cid by Molmil
Crystal structure of Oryza sativa UAM 2
Descriptor: UDP-arabinopyranose mutase
Authors:Fredslund, F, Adams, P.D, Welner, D.H.
Deposit date:2023-02-09
Release date:2024-02-21
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:Crystal structure of Oryza sativa UAM 2
To Be Published
8CGQ
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BU of 8cgq by Molmil
Crystal structure of UGT708A6 with UDP
Descriptor: CHLORIDE ION, UDP-glycosyltransferase 708A6, URIDINE-5'-DIPHOSPHATE
Authors:Fredslund, F, Bidart, G.N, Welner, D.H.
Deposit date:2023-02-06
Release date:2024-02-21
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:Crystal structure of UGT708A6 with UDP
To Be Published
5U0H
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BU of 5u0h by Molmil
Crystal structure of GH family 9 endoglucanase J30
Descriptor: CITRATE ANION, GLYCEROL, J30
Authors:Ellinghaus, T.L, Pereira, J.H, McAndrew, R.P, Welner, D.H, Adams, P.D.
Deposit date:2016-11-24
Release date:2018-05-30
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Engineering glycoside hydrolase stability by the introduction of zinc binding.
Acta Crystallogr D Struct Biol, 74, 2018
5U2O
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BU of 5u2o by Molmil
Crystal structure of Zn-binding triple mutant of GH family 9 endoglucanase J30
Descriptor: CITRATE ANION, GLYCEROL, J30 CCH, ...
Authors:Ellinghaus, T.L, Pereira, J.H, McAndrew, R.P, Welner, D.H, Adams, P.D.
Deposit date:2016-11-30
Release date:2018-05-30
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.46 Å)
Cite:Engineering glycoside hydrolase stability by the introduction of zinc binding.
Acta Crystallogr D Struct Biol, 74, 2018

 

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