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PDB: 410 results

4U9R
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BU of 4u9r by Molmil
Structure of the N-terminal Extension from Cupriavidus metallidurans CzcP
Descriptor: 3,3',3''-phosphanetriyltripropanoic acid, CADMIUM ION, CzcP cation efflux P1-ATPase
Authors:Smith, A.T, Rosenzweig, A.C.
Deposit date:2014-08-06
Release date:2015-07-08
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.17 Å)
Cite:A new metal binding domain involved in cadmium, cobalt and zinc transport.
Nat.Chem.Biol., 11, 2015
5LWJ
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BU of 5lwj by Molmil
Solution NMR structure of the GTP binding Class II RNA aptamer-ligand-complex containing a protonated adenine nucleotide with a highly shifted pKa.
Descriptor: GTP Class II RNA (34-MER), GUANOSINE-5'-TRIPHOSPHATE
Authors:Wolter, A.C, Weickhmann, A.K, Nasiri, A.H, Hantke, K, Ohlenschlaeger, O, Wunderlich, C.H, Kreutz, C, Duchardt-Ferner, E, Woehnert, J.
Deposit date:2016-09-17
Release date:2016-12-14
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:A Stably Protonated Adenine Nucleotide with a Highly Shifted pKa Value Stabilizes the Tertiary Structure of a GTP-Binding RNA Aptamer.
Angew. Chem. Int. Ed. Engl., 56, 2017
5MI0
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BU of 5mi0 by Molmil
A thermally stabilised version of Plasmodium falciparum RH5
Descriptor: MONOCLONAL ANTIBODY 9AD4, Reticulocyte binding-like protein 5,Reticulocyte binding protein 5
Authors:Campeotto, I, Goldenzweig, A, Davey, J, Barfod, L, Marshall, J.M, Silk, S.E, Wright, K.E, Draper, S.J, Higgins, M.K, Fleishman, S.J.
Deposit date:2016-11-27
Release date:2016-12-28
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:One-step design of a stable variant of the malaria invasion protein RH5 for use as a vaccine immunogen.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
7PY7
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BU of 7py7 by Molmil
CryoEM structure of E.coli RNA polymerase elongation complex bound to NusA and NusG (NusA and NusG elongation complex in more-swiveled conformation)
Descriptor: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ...
Authors:Zhu, C, Guo, X, Weixlbaumer, A.
Deposit date:2021-10-09
Release date:2022-03-23
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:Transcription factors modulate RNA polymerase conformational equilibrium.
Nat Commun, 13, 2022
7PYK
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BU of 7pyk by Molmil
CryoEM structure of E.coli RNA polymerase elongation complex bound to NusA (NusA elongation complex in more-swiveled conformation)
Descriptor: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ...
Authors:Zhu, C, Guo, X, Weixlbaumer, A.
Deposit date:2021-10-10
Release date:2022-03-23
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:Transcription factors modulate RNA polymerase conformational equilibrium.
Nat Commun, 13, 2022
7PY5
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BU of 7py5 by Molmil
CryoEM structure of E.coli RNA polymerase elongation complex bound to NusA and NusG (the consensus NusA-NusG-EC)
Descriptor: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ...
Authors:Zhu, C, Guo, X, Weixlbaumer, A.
Deposit date:2021-10-09
Release date:2022-03-23
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Transcription factors modulate RNA polymerase conformational equilibrium.
Nat Commun, 13, 2022
7PY3
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BU of 7py3 by Molmil
CryoEM structure of E.coli RNA polymerase elongation complex bound to NusA (the consensus NusA-EC)
Descriptor: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ...
Authors:Zhu, C, Guo, X, Weixlbaumer, A.
Deposit date:2021-10-08
Release date:2022-03-23
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Transcription factors modulate RNA polymerase conformational equilibrium.
Nat Commun, 13, 2022
7PY6
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BU of 7py6 by Molmil
CryoEM structure of E.coli RNA polymerase elongation complex bound to NusA and NusG (NusA and NusG elongation complex in less-swiveled conformation)
Descriptor: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ...
Authors:Zhu, C, Guo, X, Weixlbaumer, A.
Deposit date:2021-10-09
Release date:2022-03-23
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:Transcription factors modulate RNA polymerase conformational equilibrium.
Nat Commun, 13, 2022
7PYJ
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BU of 7pyj by Molmil
CryoEM structure of E.coli RNA polymerase elongation complex bound to NusA (NusA elongation complex in less-swiveled conformation)
Descriptor: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ...
Authors:Zhu, C, Guo, X, Weixlbaumer, A.
Deposit date:2021-10-10
Release date:2022-03-23
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Transcription factors modulate RNA polymerase conformational equilibrium.
Nat Commun, 13, 2022
6P1E
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BU of 6p1e by Molmil
Cu-bound PmoF1 PCuAC domain (dimer)
Descriptor: COPPER (II) ION, PmoF1, THIOCYANATE ION
Authors:Fisher, O.S, Sendzik, M.R, Rosenzweig, A.C.
Deposit date:2019-05-19
Release date:2019-09-25
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.605 Å)
Cite:PCuAC domains from methane-oxidizing bacteria use a histidine brace to bind copper.
J.Biol.Chem., 294, 2019
7Q0J
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BU of 7q0j by Molmil
RNA polymerase elongation complex in more-swiveled conformation
Descriptor: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ...
Authors:Zhu, C, Guo, X, Weixlbaumer, A.
Deposit date:2021-10-15
Release date:2022-03-23
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (4.3 Å)
Cite:Transcription factors modulate RNA polymerase conformational equilibrium.
Nat Commun, 13, 2022
7PY0
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BU of 7py0 by Molmil
CryoEM structure of E.coli RNA polymerase elongation complex bound to NusG (NusG-EC in more-swiveled conformation)
Descriptor: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ...
Authors:Zhu, C, Guo, X, Weixlbaumer, A.
Deposit date:2021-10-08
Release date:2022-03-23
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (4.5 Å)
Cite:Transcription factors modulate RNA polymerase conformational equilibrium.
Nat Commun, 13, 2022
7PY8
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BU of 7py8 by Molmil
CryoEM structure of E.coli RNA polymerase elongation complex bound to NusG (NusG-EC in less-swiveled conformation)
Descriptor: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ...
Authors:Zhu, C, Guo, X, Weixlbaumer, A.
Deposit date:2021-10-09
Release date:2022-03-23
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Transcription factors modulate RNA polymerase conformational equilibrium.
Nat Commun, 13, 2022
7Q0K
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BU of 7q0k by Molmil
RNA polymerase elongation complex in less-swiveled conformation
Descriptor: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ...
Authors:Zhu, C, Guo, X, Weixlbaumer, A.
Deposit date:2021-10-15
Release date:2022-03-23
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Transcription factors modulate RNA polymerase conformational equilibrium.
Nat Commun, 13, 2022
7PY1
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BU of 7py1 by Molmil
CryoEM structure of E.coli RNA polymerase elongation complex bound to NusG (the consensus NusG-EC)
Descriptor: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ...
Authors:Zhu, C, Guo, X, Weixlbaumer, A.
Deposit date:2021-10-08
Release date:2022-03-23
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Transcription factors modulate RNA polymerase conformational equilibrium.
Nat Commun, 13, 2022
6P1F
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BU of 6p1f by Molmil
apo PmoF2 PCuAC domain
Descriptor: Copper chaperone PCu(A)C
Authors:Fisher, O.S, Sendzik, M.R, Rosenzweig, A.C.
Deposit date:2019-05-19
Release date:2019-09-25
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.654 Å)
Cite:PCuAC domains from methane-oxidizing bacteria use a histidine brace to bind copper.
J.Biol.Chem., 294, 2019
6P16
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BU of 6p16 by Molmil
Cu-bound PCuAC domain from PmoF1
Descriptor: COPPER (II) ION, PmoF1
Authors:Sendzik, M.R, Fisher, O.S, Rosenzweig, A.C.
Deposit date:2019-05-19
Release date:2019-09-25
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.913 Å)
Cite:PCuAC domains from methane-oxidizing bacteria use a histidine brace to bind copper.
J.Biol.Chem., 294, 2019
6P1G
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BU of 6p1g by Molmil
Copper-bound PCuAC domain from PmoF2
Descriptor: COPPER (II) ION, Copper chaperone PCu(A)C, ZINC ION
Authors:Fisher, O.S, Rosenzweig, A.C.
Deposit date:2019-05-19
Release date:2019-09-25
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:PCuAC domains from methane-oxidizing bacteria use a histidine brace to bind copper.
J.Biol.Chem., 294, 2019
5L3Y
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BU of 5l3y by Molmil
Designed Artificial Cupredoxins
Descriptor: Streptavidin, [CuII(biot-et-dpea)]2+
Authors:Mann, S.I, Heinisch, T, Weitz, A.C, Hendrich, M.R, Ward, T.R, Borovik, A.S.
Deposit date:2016-05-24
Release date:2016-07-20
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Modular Artificial Cupredoxins.
J.Am.Chem.Soc., 138, 2016
8ACP
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BU of 8acp by Molmil
RNA polymerase at U-rich pause bound to regulatory RNA putL - inactive, open clamp state
Descriptor: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ...
Authors:Dey, S, Weixlbaumer, A.
Deposit date:2022-07-06
Release date:2022-10-19
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (4.5 Å)
Cite:Structural insights into RNA-mediated transcription regulation in bacteria.
Mol.Cell, 82, 2022
6ZTP
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BU of 6ztp by Molmil
E. coli 70S-RNAP expressome complex in uncoupled state 6
Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
Authors:Webster, M.W, Takacs, M, Weixlbaumer, A.
Deposit date:2020-07-20
Release date:2020-09-16
Last modified:2024-04-24
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Structural basis of transcription-translation coupling and collision in bacteria.
Science, 369, 2020
6NZI
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BU of 6nzi by Molmil
Low resolution crystal structure of the bacterial multidrug efflux transporter AcrB in the presence of cadmium
Descriptor: CADMIUM ION, Efflux pump membrane transporter
Authors:Smith, A.T, Rosenzweig, A.C.
Deposit date:2019-02-13
Release date:2019-02-27
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (4.44 Å)
Cite:Low resolution crystal structure of the bacterial multidrug efflux transporter AcrB in the presence of cadmium
To Be Published
6ZTN
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BU of 6ztn by Molmil
E. coli 70S-RNAP expressome complex in NusG-coupled state (42 nt intervening mRNA)
Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
Authors:Webster, M.W, Takacs, M, Weixlbaumer, A.
Deposit date:2020-07-20
Release date:2020-09-16
Last modified:2024-04-24
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Structural basis of transcription-translation coupling and collision in bacteria.
Science, 369, 2020
6ZTJ
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BU of 6ztj by Molmil
E. coli 70S-RNAP expressome complex in NusG-coupled state (38 nt intervening mRNA)
Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S1, ...
Authors:Webster, M.W, Takacs, M, Weixlbaumer, A.
Deposit date:2020-07-20
Release date:2020-09-16
Last modified:2024-04-24
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structural basis of transcription-translation coupling and collision in bacteria.
Science, 369, 2020
7LEW
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BU of 7lew by Molmil
Crystal structure of UBE2G2 in complex with the UBE2G2-binding region of AUP1
Descriptor: Lipid droplet-regulating VLDL assembly factor AUP1, Ubiquitin-conjugating enzyme E2 G2
Authors:Liang, Y.-H, Smith, C.E, Tsai, Y.C, Weissman, A.M, Ji, X.
Deposit date:2021-01-15
Release date:2021-11-10
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.736 Å)
Cite:A structurally conserved site in AUP1 binds the E2 enzyme UBE2G2 and is essential for ER-associated degradation.
Plos Biol., 19, 2021

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