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PDB: 236 件

8J7X
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Cryo-EM structure of hZnT7DeltaHis-loop-Fab complex in zinc-unbound state, determined in outward-facing conformation
分子名称: Heavy chain of YN7114-08 Fab, Light chain of YN7114-08 Fab, Zinc transporter 7
著者Han, B.B, Inaba, K, Watanabe, S.
登録日2023-04-28
公開日2023-09-20
最終更新日2024-10-23
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Cryo-EM structures of human zinc transporter ZnT7 reveal the mechanism of Zn 2+ uptake into the Golgi apparatus.
Nat Commun, 14, 2023
8J7V
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Cryo-EM structure of hZnT7-Fab complex in zinc-unbound state, determined in heterogeneous conformations- one subunit in an inward-facing and the other in an outward-facing conformation
分子名称: Heavy chain of YN7114-08 Fab, Light chain of YN7114-08 Fab, Zinc transporter 7
著者Han, B.B, Inaba, K, Watanabe, S.
登録日2023-04-28
公開日2023-09-20
最終更新日2024-10-16
実験手法ELECTRON MICROSCOPY (2.79 Å)
主引用文献Cryo-EM structures of human zinc transporter ZnT7 reveal the mechanism of Zn 2+ uptake into the Golgi apparatus.
Nat Commun, 14, 2023
8J80
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Cryo-EM structure of hZnT7-Fab complex in zinc state 1, determined in heterogeneous conformations- one subunit in an inward-facing zinc-bound and the other in an outward-facing zinc-unbound conformation
分子名称: Heavy chain of YN7114-08 Fab, Light chain of YN7114-08 Fab, ZINC ION, ...
著者Han, B.B, Inaba, K, Watanabe, S.
登録日2023-04-28
公開日2023-09-20
最終更新日2024-10-23
実験手法ELECTRON MICROSCOPY (2.68 Å)
主引用文献Cryo-EM structures of human zinc transporter ZnT7 reveal the mechanism of Zn 2+ uptake into the Golgi apparatus.
Nat Commun, 14, 2023
8J7U
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Cryo-EM structure of hZnT7-Fab complex in zinc-bound state, determined in outward-facing conformation
分子名称: Heavy chain of YN7114-08 Fab, Light chain of YN7114-08 Fab, ZINC ION, ...
著者Han, B.B, Inaba, K, Watanabe, S.
登録日2023-04-28
公開日2023-09-20
実験手法ELECTRON MICROSCOPY (3.12 Å)
主引用文献Cryo-EM structures of human zinc transporter ZnT7 reveal the mechanism of Zn 2+ uptake into the Golgi apparatus.
Nat Commun, 14, 2023
8J7W
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Cryo-EM structure of hZnT7-Fab complex in zinc state 2, determined in heterogeneous conformations- one subunit in an inward-facing zinc-bound and the other in an outward-facing zinc-bound conformation
分子名称: Heavy chain of YN7114-08 Fab, Light chain of YN7114-08 Fab, ZINC ION, ...
著者Han, B.B, Inaba, K, Watanabe, S.
登録日2023-04-28
公開日2023-09-20
最終更新日2024-10-16
実験手法ELECTRON MICROSCOPY (2.92 Å)
主引用文献Cryo-EM structures of human zinc transporter ZnT7 reveal the mechanism of Zn 2+ uptake into the Golgi apparatus.
Nat Commun, 14, 2023
8J7T
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BU of 8j7t by Molmil
Cryo-EM structure of hZnT7-Fab complex in zinc-unbound state, determined in outward-facing conformation
分子名称: Heavy chain of YN7114-08 Fab, Light chain of YN7114-08 Fab, Zinc transporter 7
著者Han, B.B, Inaba, K, Watanabe, S.
登録日2023-04-28
公開日2023-09-20
実験手法ELECTRON MICROSCOPY (2.2 Å)
主引用文献Cryo-EM structures of human zinc transporter ZnT7 reveal the mechanism of Zn 2+ uptake into the Golgi apparatus.
Nat Commun, 14, 2023
8J7Y
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BU of 8j7y by Molmil
Cryo-EM structure of hZnT7DeltaHis-loop-Fab complex in zinc-bound state, determined in outward-facing conformation
分子名称: Heavy chain of YN7114-08 Fab, Light chain of YN7114-08 Fab, ZINC ION, ...
著者Han, B.B, Inaba, K, Watanabe, S.
登録日2023-04-28
公開日2023-09-20
最終更新日2024-10-30
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Cryo-EM structures of human zinc transporter ZnT7 reveal the mechanism of Zn 2+ uptake into the Golgi apparatus.
Nat Commun, 14, 2023
1J1W
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Crystal Structure Of The Monomeric Isocitrate Dehydrogenase In Complex With NADP+
分子名称: Isocitrate Dehydrogenase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
著者Yasutake, Y, Watanabe, S, Yao, M, Takada, Y, Fukunaga, N, Tanaka, I.
登録日2002-12-19
公開日2003-09-23
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Crystal Structure of the Monomeric Isocitrate Dehydrogenase in the Presence of NADP+
J.Biol.Chem., 278, 2003
5YY0
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Crystal structure of the HyhL-HypA complex (form II)
分子名称: Cytosolic NiFe-hydrogenase, alpha subunit, Probable hydrogenase nickel incorporation protein HypA, ...
著者Kwon, S, Watanabe, S, Nishitani, Y, Miki, K.
登録日2017-12-07
公開日2018-06-20
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (3.243 Å)
主引用文献Crystal structures of a [NiFe] hydrogenase large subunit HyhL in an immature state in complex with a Ni chaperone HypA.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
5YXY
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Crystal structure of the HyhL-HypA complex (form I)
分子名称: Cytosolic NiFe-hydrogenase, alpha subunit, Probable hydrogenase nickel incorporation protein HypA, ...
著者Kwon, S, Watanabe, S, Nishitani, Y, Miki, K.
登録日2017-12-07
公開日2018-06-20
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (3.299 Å)
主引用文献Crystal structures of a [NiFe] hydrogenase large subunit HyhL in an immature state in complex with a Ni chaperone HypA.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
2ROZ
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BU of 2roz by Molmil
Structure of the C-terminal PID Domain of Fe65L1 Complexed with the Cytoplasmic Tail of APP Reveals a Novel Peptide Binding Mode
分子名称: Amyloid beta A4 precursor protein-binding family B member 2, peptide from Amyloid beta A4 protein
著者Li, H, Koshiba, S, Tochio, N, Watanabe, S, Harada, T, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2008-04-25
公開日2008-07-22
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Structure of the C-terminal phosphotyrosine interaction domain of Fe65L1 complexed with the cytoplasmic tail of amyloid precursor protein reveals a novel peptide binding mode
J.Biol.Chem., 283, 2008
2RRF
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The solution structure of the C-terminal region of Zinc finger FYVE domain-containing protein 21
分子名称: Zinc finger FYVE domain-containing protein 21
著者Koshiba, S, Tomizawa, T, Hayashi, F, Tochio, N, Harada, T, Watanabe, S, Kigawa, T, Yokoyama, S.
登録日2010-08-03
公開日2011-08-03
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献ZF21 protein, a regulator of the disassembly of focal adhesions and cancer metastasis, contains a novel noncanonical pleckstrin homology domain
J.Biol.Chem., 286, 2011
2RNL
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BU of 2rnl by Molmil
Solution structure of the EGF-like domain from human Amphiregulin
分子名称: Amphiregulin
著者Qin, X, Hayashi, F, Terada, T, Shirouzu, M, Watanabe, S, Kigawa, T, Yabuta, N, Nojima, H, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2008-01-11
公開日2009-01-20
最終更新日2024-10-30
実験手法SOLUTION NMR
主引用文献Solution structure of the EGF-like domain from human Amphiregulin
To be Published
5ZTF
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Structure of Ca2+ ATPase
分子名称: CALCIUM ION, MAGNESIUM ION, PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER, ...
著者Inoue, M, Watanabe, S, Inaba, K.
登録日2018-05-03
公開日2019-05-22
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.45 Å)
主引用文献Structural Basis of Sarco/Endoplasmic Reticulum Ca2+-ATPase 2b Regulation via Transmembrane Helix Interplay.
Cell Rep, 27, 2019
5YZD
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BU of 5yzd by Molmil
Crystal structure of the prefusion form of measles virus fusion protein in complex with a fusion inhibitor peptide (FIP)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, glycoprotein F1,measles virus fusion protein, ...
著者Hashiguchi, T, Fukuda, Y, Matsuoka, R, Kuroda, D, Kubota, M, Shirogane, Y, Watanabe, S, Tsumoto, K, Kohda, D, Plemper, R.K, Yanagi, Y.
登録日2017-12-14
公開日2018-02-21
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.636 Å)
主引用文献Structures of the prefusion form of measles virus fusion protein in complex with inhibitors.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
5IJA
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[NiFe] hydrogenase maturation protease HybD from Thermococcus kodakarensis
分子名称: Hydrogenase-specific maturation endopeptidase
著者Kwon, S, Nishitani, Y, Watanabe, S, Miki, K.
登録日2016-03-01
公開日2016-06-01
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.82 Å)
主引用文献Crystal structure of a [NiFe] hydrogenase maturation protease HybD from Thermococcus kodakarensis KOD1
Proteins, 84, 2016
5YZC
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Crystal structure of the prefusion form of measles virus fusion protein in complex with a fusion inhibitor compound (AS-48)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 4-nitro-2-[(phenylacetyl)amino]benzamide, ...
著者Hashiguchi, T, Fukuda, Y, Matsuoka, R, Kuroda, D, Kubota, M, Shirogane, Y, Watanabe, S, Tsumoto, K, Kohda, D, Plemper, R.K, Yanagi, Y.
登録日2017-12-14
公開日2018-02-21
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (2.334 Å)
主引用文献Structures of the prefusion form of measles virus fusion protein in complex with inhibitors.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
5YXW
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BU of 5yxw by Molmil
Crystal structure of the prefusion form of measles virus fusion protein
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, glycoprotein F1,measles virus fusion protein, ...
著者Hashiguchi, T, Fukuda, Y, Matsuoka, R, Kuroda, D, Kubota, M, Shirogane, Y, Watanabe, S, Tsumoto, K, Kohda, D, Plemper, R.K, Yanagi, Y.
登録日2017-12-07
公開日2018-02-21
最終更新日2022-03-23
実験手法X-RAY DIFFRACTION (2.776 Å)
主引用文献Structures of the prefusion form of measles virus fusion protein in complex with inhibitors.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
1ITW
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Crystal structure of the monomeric isocitrate dehydrogenase in complex with isocitrate and Mn
分子名称: ISOCITRIC ACID, Isocitrate dehydrogenase, MANGANESE (II) ION
著者Yasutake, Y, Watanabe, S, Yao, M, Takada, Y, Fukunaga, N, Tanaka, I.
登録日2002-02-12
公開日2002-12-11
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Structure of the Monomeric Isocitrate Dehydrogenase: Evidence of a Protein Monomerization by a Domain Duplication
Structure, 10, 2002
7W7V
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'late' E2P of SERCA2b
分子名称: BERYLLIUM TRIFLUORIDE ION, MAGNESIUM ION, Sarcoplasmic/endoplasmic reticulum calcium ATPase 2
著者Zhang, Y, Watanabe, S, Tsutsumi, A, Inaba, K.
登録日2021-12-06
公開日2022-12-14
最終更新日2024-06-26
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Multiple sub-state structures of SERCA2b reveal conformational overlap at transition steps during the catalytic cycle.
Cell Rep, 41, 2022
7W7U
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The 'Ca2+-unbound' BeF3- of SERCA2b
分子名称: BERYLLIUM TRIFLUORIDE ION, MAGNESIUM ION, Sarcoplasmic/endoplasmic reticulum calcium ATPase 2
著者Zhang, Y, Watanabe, S, Tsutsumi, A, Inaba, K.
登録日2021-12-06
公開日2022-12-14
最終更新日2024-10-23
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Multiple sub-state structures of SERCA2b reveal conformational overlap at transition steps during the catalytic cycle.
Cell Rep, 41, 2022
7W7W
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E2 Pi of SERCA2b
分子名称: MAGNESIUM ION, Sarcoplasmic/endoplasmic reticulum calcium ATPase 2, TETRAFLUOROALUMINATE ION
著者Zhang, Y, Watanabe, S, Tsutsumi, A, Inaba, K.
登録日2021-12-06
公開日2022-12-14
最終更新日2024-10-30
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Multiple sub-state structures of SERCA2b reveal conformational overlap at transition steps during the catalytic cycle.
Cell Rep, 41, 2022
7W7T
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The E1-BeF3- 2Ca2+ of SERCA2b
分子名称: BERYLLIUM TRIFLUORIDE ION, CALCIUM ION, MAGNESIUM ION, ...
著者Zhang, Y, Watanabe, S, Tsutsumi, A, Inaba, K.
登録日2021-12-06
公開日2022-12-14
最終更新日2024-10-16
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Multiple sub-state structures of SERCA2b reveal conformational overlap at transition steps during the catalytic cycle.
Cell Rep, 41, 2022
6JJU
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BU of 6jju by Molmil
Structure of Ca2+ ATPase
分子名称: CALCIUM ION, MAGNESIUM ION, PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER, ...
著者Inoue, M, Sakuta, N, Watanabe, S, Inaba, K.
登録日2019-02-27
公開日2019-05-22
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Structural Basis of Sarco/Endoplasmic Reticulum Ca2+-ATPase 2b Regulation via Transmembrane Helix Interplay.
Cell Rep, 27, 2019
5B2C
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BU of 5b2c by Molmil
Crystal structure of Mumps virus hemagglutinin-neuraminidase
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, HN protein, SULFATE ION
著者Kubota, M, Takeuchi, K, Watanabe, S, Ohno, S, Matsuoka, R, Kohda, D, Hiramatsu, H, Suzuki, Y, Nakayama, T, Terada, T, Shimizu, K, Shimizu, N, Yanagi, Y, Hashiguchi, T.
登録日2016-01-14
公開日2016-09-28
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.238 Å)
主引用文献Trisaccharide containing alpha 2,3-linked sialic acid is a receptor for mumps virus
Proc.Natl.Acad.Sci.USA, 113, 2016

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件を2024-10-30に公開中

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