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PDB: 42 results

4UN1
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BU of 4un1 by Molmil
Sirohaem decarboxylase AhbA/B - an enzyme with structural homology to the Lrp/AsnC transcription factor family that is part of the alternative haem biosynthesis pathway.
Descriptor: 12,18-DIDECARBOXY-SIROHEME, PUTATIVE TRANSCRIPTIONAL REGULATOR, ASNC FAMILY
Authors:Palmer, D.J, Brown, D.G, Warren, M.J, Pickersgill, R.W.
Deposit date:2014-05-23
Release date:2014-06-11
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:The Structure, Function and Properties of Sirohaem Decarboxylase - an Enzyme with Structural Homology to a Transcription Factor Family that is Part of the Alternative Haem Biosynthesis Pathway.
Mol.Microbiol., 93, 2014
5N0G
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Crystal Structure of CobH T85A (precorrin-8x methyl mutase) complexed with C5 allyl-HBA
Descriptor: 3-[(1~{R},2~{S},3~{S},4~{Z},7~{S},8~{S},9~{Z},15~{R},17~{R},18~{R},19~{R})-2,7,18-tris(2-hydroxy-2-oxoethyl)-3,13,17-tris(3-hydroxy-3-oxopropyl)-1,2,7,12,12,15,17-heptamethyl-5-prop-2-enyl-3,8,15,18,19,21-hexahydrocorrin-8-yl]propanoic acid, GLYCEROL, Precorrin-8X methylmutase
Authors:Nemoto-Smith, E.H, Lawrence, A.D, Brown, D.G, Warren, M.J.
Deposit date:2017-02-02
Release date:2018-02-14
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.57 Å)
Cite:Novel cobalamin analogues and their application in the trafficking of cobalamin in bacteria, worms and plants
To Be Published
4X7G
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CobK precorrin-6A reductase
Descriptor: 3-[(1R,2S,3S,7S,11S,16S,17R,18R,19R)-2,7,12,18-tetrakis(2-hydroxy-2-oxoethyl)-3,13-bis(3-hydroxy-3-oxopropyl)-1,2,5,7,11,17-hexamethyl-17-(3-oxidanyl-3-oxidanylidene-prop-1-enyl)-3,6,8,10,15,16,18,19,21,24-decahydrocorrin-8-yl]propanoic acid, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, Precorrin-6A reductase
Authors:Gu, S, Deery, E, Warren, M.J, Pickersgill, R.W.
Deposit date:2014-12-09
Release date:2016-01-20
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.22 Å)
Cite:Crystal structure of CobK reveals strand-swapping between Rossmann-fold domains and molecular basis of the reduced precorrin product trap.
Sci Rep, 5, 2015
4MLV
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Crystal Structure of Bacillus megaterium porphobilinogen deaminase
Descriptor: 3-[(5S)-5-{[3-(2-carboxyethyl)-4-(carboxymethyl)-5-methyl-1H-pyrrol-2-yl]methyl}-4-(carboxymethyl)-2-oxo-2,5-dihydro-1H-pyrrol-3-yl]propanoic acid, 3-[5-{[3-(2-carboxyethyl)-4-(carboxymethyl)-5-methyl-1H-pyrrol-2-yl]methyl}-4-(carboxymethyl)-1H-pyrrol-3-yl]propanoic acid, ACETIC ACID, ...
Authors:Azim, N, Deery, E, Warren, M.J, Erskine, P, Cooper, J.B, Coker, A, Wood, S.P, Akhtar, M.
Deposit date:2013-09-06
Release date:2014-04-02
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.455 Å)
Cite:Structural evidence for the partially oxidized dipyrromethene and dipyrromethanone forms of the cofactor of porphobilinogen deaminase: structures of the Bacillus megaterium enzyme at near-atomic resolution.
Acta Crystallogr.,Sect.D, 70, 2014
4MLQ
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Crystal structure of Bacillus megaterium porphobilinogen deaminase
Descriptor: 3-[(5S)-5-{[3-(2-carboxyethyl)-4-(carboxymethyl)-5-methyl-1H-pyrrol-2-yl]methyl}-4-(carboxymethyl)-2-oxo-2,5-dihydro-1H-pyrrol-3-yl]propanoic acid, 3-[5-{[3-(2-carboxyethyl)-4-(carboxymethyl)-5-methyl-1H-pyrrol-2-yl]methyl}-4-(carboxymethyl)-1H-pyrrol-3-yl]propanoic acid, ACETIC ACID, ...
Authors:Azim, N, Deery, E, Warren, M.J, Erskine, P, Cooper, J.B, Coker, A, Wood, S.P, Akhtar, M.
Deposit date:2013-09-06
Release date:2014-04-02
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural evidence for the partially oxidized dipyrromethene and dipyrromethanone forms of the cofactor of porphobilinogen deaminase: structures of the Bacillus megaterium enzyme at near-atomic resolution.
Acta Crystallogr.,Sect.D, 70, 2014
3PAC
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BU of 3pac by Molmil
Crystal structure of PduT a trimeric bacterial microcompartment protein with 4Fe-4S cluster binding site
Descriptor: Shell protein
Authors:Pang, A.H, Warren, M.J, Pickersgill, R.W.
Deposit date:2010-10-19
Release date:2010-12-01
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Structure of PduT, a trimeric bacterial microcompartment protein with a 4Fe-4S cluster-binding site
Acta Crystallogr.,Sect.D, 67, 2011
4P7V
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Structural insights into higher-order assembly and function of the bacterial microcompartment protein PduA
Descriptor: GLYCEROL, Polyhedral bodies
Authors:Pang, A, Frank, S, Brown, I.R, Warren, M.J, Pickersgill, R.W.
Deposit date:2014-03-27
Release date:2014-06-04
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Structural Insights into Higher Order Assembly and Function of the Bacterial Microcompartment Protein PduA.
J.Biol.Chem., 289, 2014
4P7T
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Structural insights into higher-order assembly and function of the bacterial microcompartment protein PduA
Descriptor: Polyhedral bodies
Authors:Pickersgill, R.W, Frank, S, Pang, A, Warren, M.J.
Deposit date:2014-03-27
Release date:2014-06-04
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:Structural Insights into Higher Order Assembly and Function of the Bacterial Microcompartment Protein PduA.
J.Biol.Chem., 289, 2014
3IO0
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Crystal structure of EtuB from Clostridium kluyveri
Descriptor: EtuB protein
Authors:Pickersgill, R.W, Warren, M.J.
Deposit date:2009-08-13
Release date:2009-09-15
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structure of a trimeric bacterial microcompartment shell protein, EtuB, associated with ethanol utilisation in Clostridium kluyveri.
Biochem.J., 423, 2009
1KYQ
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BU of 1kyq by Molmil
Met8p: A bifunctional NAD-dependent dehydrogenase and ferrochelatase involved in siroheme synthesis.
Descriptor: NICOTINAMIDE-ADENINE-DINUCLEOTIDE, Siroheme biosynthesis protein MET8
Authors:Schubert, H.L, Raux, E, Brindley, A.A, Wilson, K.S, Hill, C.P, Warren, M.J.
Deposit date:2002-02-05
Release date:2002-05-08
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The structure of Saccharomyces cerevisiae Met8p, a bifunctional dehydrogenase and ferrochelatase.
EMBO J., 21, 2002
1CBF
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BU of 1cbf by Molmil
THE X-RAY STRUCTURE OF A COBALAMIN BIOSYNTHETIC ENZYME, COBALT PRECORRIN-4 METHYLTRANSFERASE, CBIF
Descriptor: COBALT-PRECORRIN-4 TRANSMETHYLASE, PHOSPHATE ION, S-ADENOSYL-L-HOMOCYSTEINE
Authors:Schubert, H.L, Raux, E, Woodcock, S.C, Wilson, K.S, Warren, M.J.
Deposit date:1998-05-01
Release date:1999-05-11
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:The X-ray structure of a cobalamin biosynthetic enzyme, cobalt-precorrin-4 methyltransferase.
Nat.Struct.Biol., 5, 1998
2W6K
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BU of 2w6k by Molmil
The crystal structure at 1.7 A resolution of CobE, a protein from the cobalamin (vitamin B12) biosynthetic pathway
Descriptor: COBE, GLYCEROL, SULFATE ION
Authors:Vevodova, J, Smith, D, McGoldrick, H, Deery, E, Murzin, A.G, Warren, M.J, Wilson, K.S.
Deposit date:2008-12-18
Release date:2008-12-30
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The Crystal Structure at 1.7 A Resolution of Cobe, a Protein from the Cobalamin (Vitamin B12) Biosynthetic Pathway
To be Published
3CB0
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BU of 3cb0 by Molmil
CobR
Descriptor: 4-HYDROXYPHENYLACETATE 3-MONOOXYGENASE, FLAVIN MONONUCLEOTIDE
Authors:Lawrence, A.D, Warren, M.J, Pickersgill, R.W.
Deposit date:2008-02-21
Release date:2008-03-11
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Identification, characterization, and structure/function analysis of a corrin reductase involved in adenosylcobalamin biosynthesis
J.Biol.Chem., 283, 2008
3DFZ
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BU of 3dfz by Molmil
SirC, precorrin-2 dehydrogenase
Descriptor: GLYCEROL, Precorrin-2 dehydrogenase, SULFATE ION
Authors:Schubert, H.L, Hill, C.P, Warren, M.J.
Deposit date:2008-06-12
Release date:2008-10-21
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure and function of SirC from Bacillus megaterium: a metal-binding precorrin-2 dehydrogenase
Biochem.J., 415, 2008
4FDV
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BU of 4fdv by Molmil
CobH from Rhodobacter capsulatus (SB1003) in complex with HBA
Descriptor: 3-[(1R,2R,3R,5R,6S,7R,9Z,12S,13S,14Z,17S,18S,19R)-2,13,18-tris(2-hydroxy-2-oxoethyl)-3,12,17-tris(3-hydroxy-3-oxopropyl)-3,5,8,8,13,15,18,19-octamethyl-1,2,5,6,7,12,17,22-octahydrocorrin-7-yl]propanoic acid, GLYCEROL, Precorrin-8X methylmutase
Authors:Pickersgill, R.W, Schroeder, S, Deery, E, Warren, M.J.
Deposit date:2012-05-29
Release date:2012-10-17
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:An enzyme-trap approach allows isolation of intermediates in cobalamin biosynthesis.
Nat.Chem.Biol., 8, 2012
2CBF
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BU of 2cbf by Molmil
THE X-RAY STRUCTURE OF A COBALAMIN BIOSYNTHETIC ENZYME, COBALT PRECORRIN-4 METHYLTRANSFERASE, CBIF, FROM BACILLUS MEGATERIUM, WITH THE HIS-TAG CLEAVED OFF
Descriptor: COBALT-PRECORRIN-4 TRANSMETHYLASE, S-ADENOSYL-L-HOMOCYSTEINE
Authors:Schubert, H.L, Raux, E, Woodcock, S.C, Warren, M.J, Wilson, K.S.
Deposit date:1998-05-01
Release date:1999-05-11
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:The X-ray structure of a cobalamin biosynthetic enzyme, cobalt-precorrin-4 methyltransferase.
Nat.Struct.Biol., 5, 1998
4IRA
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BU of 4ira by Molmil
CobR in complex with FAD
Descriptor: 4-hydroxyphenylacetate 3-monooxygenase, FLAVIN-ADENINE DINUCLEOTIDE, SULFATE ION
Authors:Lawrence, A.D, Scott, A.F, Warren, M.J, Pickersgill, R.W.
Deposit date:2013-01-14
Release date:2014-01-29
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Biophysical characterisation and structure-function analysis of Brucella melitensis CobR: Protein-flavin interactions determine function and stability
To be Published
1YLV
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BU of 1ylv by Molmil
SCHIFF-BASE COMPLEX OF YEAST 5-AMINOLAEVULINIC ACID DEHYDRATASE WITH LAEVULINIC ACID
Descriptor: LAEVULINIC ACID, PROTEIN (5-AMINOLAEVULINIC ACID DEHYDRATASE), ZINC ION
Authors:Erskine, P.T, Newbold, R, Roper, J, Coker, A, Warren, M.J, Shoolingin-Jordan, P.M, Wood, S.P, Cooper, J.B.
Deposit date:1999-02-22
Release date:2000-02-23
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:The Schiff base complex of yeast 5-aminolaevulinic acid dehydratase with laevulinic acid.
Protein Sci., 8, 1999
1W31
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BU of 1w31 by Molmil
YEAST 5-AMINOLAEVULINIC ACID DEHYDRATASE 5-HYDROXYLAEVULINIC ACID COMPLEX
Descriptor: 5-HYDROXYLAEVULINIC ACID, DELTA-AMINOLEVULINIC ACID DEHYDRATASE, ZINC ION
Authors:Erskine, P.T, Coates, L, Newbold, R, Brindley, A.A, Stauffer, F, Beaven, G.D.E, Gill, R, Wood, S.P, Warren, M.J, Cooper, J.B, Shoolingin-Jordan, P.M, Neier, R.
Deposit date:2004-07-11
Release date:2005-08-23
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure of Yeast 5-Aminolaevulinic Acid Dehydratase Complexed with the Inhibitor 5-Hydroxylaevulinic Acid
Acta Crystallogr.,Sect.D, 61, 2005
1QGO
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BU of 1qgo by Molmil
ANAEROBIC COBALT CHELATASE IN COBALAMIN BIOSYNTHESIS FROM SALMONELLA TYPHIMURIUM
Descriptor: ANAEROBIC COBALAMIN BIOSYNTHETIC COBALT CHELATASE, SULFATE ION
Authors:Schubert, H.L, Raux, E, Warren, M.J, Wilson, K.S.
Deposit date:1999-05-03
Release date:1999-09-29
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Common chelatase design in the branched tetrapyrrole pathways of heme and anaerobic cobalamin synthesis.
Biochemistry, 38, 1999
2XWP
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BU of 2xwp by Molmil
ANAEROBIC COBALT CHELATASE (CbiK) FROM SALMONELLA TYPHIMURIUM IN COMPLEX WITH METALATED TETRAPYRROLE
Descriptor: COBALT SIROHYDROCHLORIN, GLYCEROL, SIROHYDROCHLORIN COBALTOCHELATASE
Authors:Ladakis, D, Brindley, A.A, Deery, E, Warren, M.J, Pickersgill, R.W.
Deposit date:2010-11-04
Release date:2010-12-22
Last modified:2024-09-18
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Evolution in a Family of Chelatases Facilitated by the Introduction of Active Site Asymmetry and Protein Oligomerization.
Proc.Natl.Acad.Sci.USA, 108, 2011
2XWQ
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Anaerobic cobalt chelatase from Archeaoglobus fulgidus (CbiX) in complex with metalated sirohydrochlorin product
Descriptor: COBALT SIROHYDROCHLORIN, SIROHYDROCHLORIN COBALTOCHELATASE
Authors:Ladakis, D, Brindley, A.A, Deery, E, Warren, M.J, Pickersgill, R.W.
Deposit date:2010-11-04
Release date:2010-12-22
Last modified:2024-09-18
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Evolution in a Family of Chelatases Facilitated by the Introduction of Active Site Asymmetry and Protein Oligomerization.
Proc.Natl.Acad.Sci.USA, 108, 2011
2XWS
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BU of 2xws by Molmil
ANAEROBIC COBALT CHELATASE (CbiX) FROM ARCHAEOGLOBUS FULGIDUS
Descriptor: SIROHYDROCHLORIN COBALTOCHELATASE
Authors:Romao, C.V, Ladakis, D, Lobo, S.A.L, Carrondo, M.A, Brindley, A.A, Deery, E, Matias, P.M, Pickersgill, R.W, Saraiva, L.M, Warren, M.J.
Deposit date:2010-11-04
Release date:2010-12-22
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Evolution in a Family of Chelatases Facilitated by the Introduction of Active Site Asymmetry and Protein Oligomerization.
Proc.Natl.Acad.Sci.USA, 108, 2011
2QBU
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Crystal structure of Methanothermobacter thermautotrophicus CbiL
Descriptor: Precorrin-2 methyltransferase, S-ADENOSYL-L-HOMOCYSTEINE
Authors:Frank, S, Warren, M.J, Pickersgill, R.W.
Deposit date:2007-06-18
Release date:2008-04-15
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Elucidation of substrate specificity in the cobalamin (vitamin B12) biosynthetic methyltransferases. Structure and function of the C20 methyltransferase (CbiL) from Methanothermobacter thermautotrophicus.
J.Biol.Chem., 282, 2007
2W6L
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The crystal structure at 1.7 A resolution of CobE, a protein from the cobalamin (vitamin B12) biosynthetic pathway
Descriptor: COBE, GLYCEROL, SULFATE ION
Authors:Vevodova, J, Smith, D, McGoldrick, H, Deery, E, Murzin, A.G, Warren, M.J, Wilson, K.S.
Deposit date:2008-12-18
Release date:2008-12-30
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:The Crystal Structure at 1.7 A Resolution of Cobe, a Protein from the Cobalamin (Vitamin B12) Biosynthetic Pathway
To be Published

 

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