Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 42 results

1QGO
DownloadVisualize
BU of 1qgo by Molmil
ANAEROBIC COBALT CHELATASE IN COBALAMIN BIOSYNTHESIS FROM SALMONELLA TYPHIMURIUM
Descriptor: ANAEROBIC COBALAMIN BIOSYNTHETIC COBALT CHELATASE, SULFATE ION
Authors:Schubert, H.L, Raux, E, Warren, M.J, Wilson, K.S.
Deposit date:1999-05-03
Release date:1999-09-29
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Common chelatase design in the branched tetrapyrrole pathways of heme and anaerobic cobalamin synthesis.
Biochemistry, 38, 1999
4MLV
DownloadVisualize
BU of 4mlv by Molmil
Crystal Structure of Bacillus megaterium porphobilinogen deaminase
Descriptor: 3-[(5S)-5-{[3-(2-carboxyethyl)-4-(carboxymethyl)-5-methyl-1H-pyrrol-2-yl]methyl}-4-(carboxymethyl)-2-oxo-2,5-dihydro-1H-pyrrol-3-yl]propanoic acid, 3-[5-{[3-(2-carboxyethyl)-4-(carboxymethyl)-5-methyl-1H-pyrrol-2-yl]methyl}-4-(carboxymethyl)-1H-pyrrol-3-yl]propanoic acid, ACETIC ACID, ...
Authors:Azim, N, Deery, E, Warren, M.J, Erskine, P, Cooper, J.B, Coker, A, Wood, S.P, Akhtar, M.
Deposit date:2013-09-06
Release date:2014-04-02
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.455 Å)
Cite:Structural evidence for the partially oxidized dipyrromethene and dipyrromethanone forms of the cofactor of porphobilinogen deaminase: structures of the Bacillus megaterium enzyme at near-atomic resolution.
Acta Crystallogr.,Sect.D, 70, 2014
4MLQ
DownloadVisualize
BU of 4mlq by Molmil
Crystal structure of Bacillus megaterium porphobilinogen deaminase
Descriptor: 3-[(5S)-5-{[3-(2-carboxyethyl)-4-(carboxymethyl)-5-methyl-1H-pyrrol-2-yl]methyl}-4-(carboxymethyl)-2-oxo-2,5-dihydro-1H-pyrrol-3-yl]propanoic acid, 3-[5-{[3-(2-carboxyethyl)-4-(carboxymethyl)-5-methyl-1H-pyrrol-2-yl]methyl}-4-(carboxymethyl)-1H-pyrrol-3-yl]propanoic acid, ACETIC ACID, ...
Authors:Azim, N, Deery, E, Warren, M.J, Erskine, P, Cooper, J.B, Coker, A, Wood, S.P, Akhtar, M.
Deposit date:2013-09-06
Release date:2014-04-02
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural evidence for the partially oxidized dipyrromethene and dipyrromethanone forms of the cofactor of porphobilinogen deaminase: structures of the Bacillus megaterium enzyme at near-atomic resolution.
Acta Crystallogr.,Sect.D, 70, 2014
1QNV
DownloadVisualize
BU of 1qnv by Molmil
yeast 5-aminolaevulinic acid dehydratase Lead (Pb) complex
Descriptor: 5-AMINOLAEVULINIC ACID DEHYDRATASE, LEAD (II) ION
Authors:Erskine, P.T, Senior, N.M, Warren, M.J, Wood, S.P, Cooper, J.B.
Deposit date:1999-10-21
Release date:2000-10-19
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:MAD Analyses of Yeast 5-Aminolaevulinic Acid Dehydratase. Their Use in Structure Determination and in Defining the Metal Binding Sites
Acta Crystallogr.,Sect.D, 56, 2000
1QML
DownloadVisualize
BU of 1qml by Molmil
Hg complex of yeast 5-aminolaevulinic acid dehydratase
Descriptor: 5-AMINOLAEVULINIC ACID DEHYDRATASE, MERCURY (II) ION
Authors:Erskine, P.T, Senior, N, Warren, M.J, Wood, S.P, Cooper, J.B.
Deposit date:1999-10-02
Release date:2000-10-06
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:MAD Analyses of Yeast 5-Aminolaevulinic Acid Dehydratase. Their Use in Structure Determination and in Defining the Metal Binding Sites
Acta Crystallogr.,Sect.D, 56, 2000
1H7O
DownloadVisualize
BU of 1h7o by Molmil
SCHIFF-BASE COMPLEX OF YEAST 5-AMINOLAEVULINIC ACID DEHYDRATASE WITH 5-AMINOLAEVULINIC ACID AT 1.7 A RESOLUTION
Descriptor: 5-AMINOLAEVULINIC ACID DEHYDRATASE, DELTA-AMINO VALERIC ACID, ZINC ION
Authors:Erskine, P.T, Newbold, R, Brindley, A.A, Wood, S.P, Shoolingin-Jordan, P.M, Warren, M.J, Cooper, J.B.
Deposit date:2001-07-09
Release date:2001-07-10
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:The X-Ray Structure of Yeast 5-Aminolaevulinic Acid Dehydratase Complexed with Substrate and Three Inhibitors
J.Mol.Biol., 312, 2001
1H7R
DownloadVisualize
BU of 1h7r by Molmil
SCHIFF-BASE COMPLEX OF YEAST 5-AMINOLAEVULINIC ACID DEHYDRATASE WITH SUCCINYLACETONE AT 2.0 A RESOLUTION.
Descriptor: 4,6-DIOXOHEPTANOIC ACID, 5-AMINOLAEVULINIC ACID DEHYDRATASE, ZINC ION
Authors:Erskine, P.T, Newbold, R, Brindley, A.A, Wood, S.P, Shoolingin-Jordan, P.M, Warren, M.J, Cooper, J.B.
Deposit date:2001-07-09
Release date:2001-07-12
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:The X-Ray Structure of Yeast 5-Aminolaevulinic Acid Dehydratase Complexed with Substrate and Three Inhibitors
J.Mol.Biol., 312, 2001
1H7N
DownloadVisualize
BU of 1h7n by Molmil
SCHIFF-BASE COMPLEX OF YEAST 5-AMINOLAEVULINIC ACID DEHYDRATASE WITH LAEVULINIC ACID AT 1.6 A RESOLUTION
Descriptor: 5-AMINOLAEVULINIC ACID DEHYDRATASE, LAEVULINIC ACID, ZINC ION
Authors:Erskine, P.T, Newbold, R, Brindley, A.A, Wood, S.P, Shoolingin-Jordan, P.M, Warren, M.J, Cooper, J.B.
Deposit date:2001-07-09
Release date:2001-07-10
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:The X-Ray Structure of Yeast 5-Aminolaevulinic Acid Dehydratase Complexed with Substrate and Three Inhibitors
J.Mol.Biol., 312, 2001
4IRA
DownloadVisualize
BU of 4ira by Molmil
CobR in complex with FAD
Descriptor: 4-hydroxyphenylacetate 3-monooxygenase, FLAVIN-ADENINE DINUCLEOTIDE, SULFATE ION
Authors:Lawrence, A.D, Scott, A.F, Warren, M.J, Pickersgill, R.W.
Deposit date:2013-01-14
Release date:2014-01-29
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Biophysical characterisation and structure-function analysis of Brucella melitensis CobR: Protein-flavin interactions determine function and stability
To be Published
5N0G
DownloadVisualize
BU of 5n0g by Molmil
Crystal Structure of CobH T85A (precorrin-8x methyl mutase) complexed with C5 allyl-HBA
Descriptor: 3-[(1~{R},2~{S},3~{S},4~{Z},7~{S},8~{S},9~{Z},15~{R},17~{R},18~{R},19~{R})-2,7,18-tris(2-hydroxy-2-oxoethyl)-3,13,17-tris(3-hydroxy-3-oxopropyl)-1,2,7,12,12,15,17-heptamethyl-5-prop-2-enyl-3,8,15,18,19,21-hexahydrocorrin-8-yl]propanoic acid, GLYCEROL, Precorrin-8X methylmutase
Authors:Nemoto-Smith, E.H, Lawrence, A.D, Brown, D.G, Warren, M.J.
Deposit date:2017-02-02
Release date:2018-02-14
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.57 Å)
Cite:Novel cobalamin analogues and their application in the trafficking of cobalamin in bacteria, worms and plants
To Be Published
4UN1
DownloadVisualize
BU of 4un1 by Molmil
Sirohaem decarboxylase AhbA/B - an enzyme with structural homology to the Lrp/AsnC transcription factor family that is part of the alternative haem biosynthesis pathway.
Descriptor: 12,18-DIDECARBOXY-SIROHEME, PUTATIVE TRANSCRIPTIONAL REGULATOR, ASNC FAMILY
Authors:Palmer, D.J, Brown, D.G, Warren, M.J, Pickersgill, R.W.
Deposit date:2014-05-23
Release date:2014-06-11
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:The Structure, Function and Properties of Sirohaem Decarboxylase - an Enzyme with Structural Homology to a Transcription Factor Family that is Part of the Alternative Haem Biosynthesis Pathway.
Mol.Microbiol., 93, 2014
4X7G
DownloadVisualize
BU of 4x7g by Molmil
CobK precorrin-6A reductase
Descriptor: 3-[(1R,2S,3S,7S,11S,16S,17R,18R,19R)-2,7,12,18-tetrakis(2-hydroxy-2-oxoethyl)-3,13-bis(3-hydroxy-3-oxopropyl)-1,2,5,7,11,17-hexamethyl-17-(3-oxidanyl-3-oxidanylidene-prop-1-enyl)-3,6,8,10,15,16,18,19,21,24-decahydrocorrin-8-yl]propanoic acid, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, Precorrin-6A reductase
Authors:Gu, S, Deery, E, Warren, M.J, Pickersgill, R.W.
Deposit date:2014-12-09
Release date:2016-01-20
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.22 Å)
Cite:Crystal structure of CobK reveals strand-swapping between Rossmann-fold domains and molecular basis of the reduced precorrin product trap.
Sci Rep, 5, 2015
3PAC
DownloadVisualize
BU of 3pac by Molmil
Crystal structure of PduT a trimeric bacterial microcompartment protein with 4Fe-4S cluster binding site
Descriptor: Shell protein
Authors:Pang, A.H, Warren, M.J, Pickersgill, R.W.
Deposit date:2010-10-19
Release date:2010-12-01
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Structure of PduT, a trimeric bacterial microcompartment protein with a 4Fe-4S cluster-binding site
Acta Crystallogr.,Sect.D, 67, 2011
4AU1
DownloadVisualize
BU of 4au1 by Molmil
Crystal Structure of CobH (precorrin-8x methyl mutase) complexed with C5 desmethyl-HBA
Descriptor: DESMETHYL-HBA, PRECORRIN-8X METHYLMUTASE, SULFATE ION
Authors:Deery, E, Lawrence, A.D, Schroeder, S, Taylor, S.L, Seyedarabi, A, Vevodova, J, Wilson, K.S, Brown, D, Geeves, M.A, Howard, M.J, Pickersgill, R.W, Warren, M.J.
Deposit date:2012-05-11
Release date:2012-09-19
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:An Enzyme-Trap Approach Allows Isolation of Intermediates in Cobalamin Biosynthesis
Nat.Chem.Biol., 8, 2012
3IO0
DownloadVisualize
BU of 3io0 by Molmil
Crystal structure of EtuB from Clostridium kluyveri
Descriptor: EtuB protein
Authors:Pickersgill, R.W, Warren, M.J.
Deposit date:2009-08-13
Release date:2009-09-15
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structure of a trimeric bacterial microcompartment shell protein, EtuB, associated with ethanol utilisation in Clostridium kluyveri.
Biochem.J., 423, 2009
1KYQ
DownloadVisualize
BU of 1kyq by Molmil
Met8p: A bifunctional NAD-dependent dehydrogenase and ferrochelatase involved in siroheme synthesis.
Descriptor: NICOTINAMIDE-ADENINE-DINUCLEOTIDE, Siroheme biosynthesis protein MET8
Authors:Schubert, H.L, Raux, E, Brindley, A.A, Wilson, K.S, Hill, C.P, Warren, M.J.
Deposit date:2002-02-05
Release date:2002-05-08
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The structure of Saccharomyces cerevisiae Met8p, a bifunctional dehydrogenase and ferrochelatase.
EMBO J., 21, 2002
1CBF
DownloadVisualize
BU of 1cbf by Molmil
THE X-RAY STRUCTURE OF A COBALAMIN BIOSYNTHETIC ENZYME, COBALT PRECORRIN-4 METHYLTRANSFERASE, CBIF
Descriptor: COBALT-PRECORRIN-4 TRANSMETHYLASE, PHOSPHATE ION, S-ADENOSYL-L-HOMOCYSTEINE
Authors:Schubert, H.L, Raux, E, Woodcock, S.C, Wilson, K.S, Warren, M.J.
Deposit date:1998-05-01
Release date:1999-05-11
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:The X-ray structure of a cobalamin biosynthetic enzyme, cobalt-precorrin-4 methyltransferase.
Nat.Struct.Biol., 5, 1998
3CB0
DownloadVisualize
BU of 3cb0 by Molmil
CobR
Descriptor: 4-HYDROXYPHENYLACETATE 3-MONOOXYGENASE, FLAVIN MONONUCLEOTIDE
Authors:Lawrence, A.D, Warren, M.J, Pickersgill, R.W.
Deposit date:2008-02-21
Release date:2008-03-11
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Identification, characterization, and structure/function analysis of a corrin reductase involved in adenosylcobalamin biosynthesis
J.Biol.Chem., 283, 2008
4FDV
DownloadVisualize
BU of 4fdv by Molmil
CobH from Rhodobacter capsulatus (SB1003) in complex with HBA
Descriptor: 3-[(1R,2R,3R,5R,6S,7R,9Z,12S,13S,14Z,17S,18S,19R)-2,13,18-tris(2-hydroxy-2-oxoethyl)-3,12,17-tris(3-hydroxy-3-oxopropyl)-3,5,8,8,13,15,18,19-octamethyl-1,2,5,6,7,12,17,22-octahydrocorrin-7-yl]propanoic acid, GLYCEROL, Precorrin-8X methylmutase
Authors:Pickersgill, R.W, Schroeder, S, Deery, E, Warren, M.J.
Deposit date:2012-05-29
Release date:2012-10-17
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:An enzyme-trap approach allows isolation of intermediates in cobalamin biosynthesis.
Nat.Chem.Biol., 8, 2012
2W6K
DownloadVisualize
BU of 2w6k by Molmil
The crystal structure at 1.7 A resolution of CobE, a protein from the cobalamin (vitamin B12) biosynthetic pathway
Descriptor: COBE, GLYCEROL, SULFATE ION
Authors:Vevodova, J, Smith, D, McGoldrick, H, Deery, E, Murzin, A.G, Warren, M.J, Wilson, K.S.
Deposit date:2008-12-18
Release date:2008-12-30
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The Crystal Structure at 1.7 A Resolution of Cobe, a Protein from the Cobalamin (Vitamin B12) Biosynthetic Pathway
To be Published
2CBF
DownloadVisualize
BU of 2cbf by Molmil
THE X-RAY STRUCTURE OF A COBALAMIN BIOSYNTHETIC ENZYME, COBALT PRECORRIN-4 METHYLTRANSFERASE, CBIF, FROM BACILLUS MEGATERIUM, WITH THE HIS-TAG CLEAVED OFF
Descriptor: COBALT-PRECORRIN-4 TRANSMETHYLASE, S-ADENOSYL-L-HOMOCYSTEINE
Authors:Schubert, H.L, Raux, E, Woodcock, S.C, Warren, M.J, Wilson, K.S.
Deposit date:1998-05-01
Release date:1999-05-11
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:The X-ray structure of a cobalamin biosynthetic enzyme, cobalt-precorrin-4 methyltransferase.
Nat.Struct.Biol., 5, 1998
3DFZ
DownloadVisualize
BU of 3dfz by Molmil
SirC, precorrin-2 dehydrogenase
Descriptor: GLYCEROL, Precorrin-2 dehydrogenase, SULFATE ION
Authors:Schubert, H.L, Hill, C.P, Warren, M.J.
Deposit date:2008-06-12
Release date:2008-10-21
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure and function of SirC from Bacillus megaterium: a metal-binding precorrin-2 dehydrogenase
Biochem.J., 415, 2008
4P7V
DownloadVisualize
BU of 4p7v by Molmil
Structural insights into higher-order assembly and function of the bacterial microcompartment protein PduA
Descriptor: GLYCEROL, Polyhedral bodies
Authors:Pang, A, Frank, S, Brown, I.R, Warren, M.J, Pickersgill, R.W.
Deposit date:2014-03-27
Release date:2014-06-04
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Structural Insights into Higher Order Assembly and Function of the Bacterial Microcompartment Protein PduA.
J.Biol.Chem., 289, 2014
4P7T
DownloadVisualize
BU of 4p7t by Molmil
Structural insights into higher-order assembly and function of the bacterial microcompartment protein PduA
Descriptor: Polyhedral bodies
Authors:Pickersgill, R.W, Frank, S, Pang, A, Warren, M.J.
Deposit date:2014-03-27
Release date:2014-06-04
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:Structural Insights into Higher Order Assembly and Function of the Bacterial Microcompartment Protein PduA.
J.Biol.Chem., 289, 2014
2XWP
DownloadVisualize
BU of 2xwp by Molmil
ANAEROBIC COBALT CHELATASE (CbiK) FROM SALMONELLA TYPHIMURIUM IN COMPLEX WITH METALATED TETRAPYRROLE
Descriptor: COBALT SIROHYDROCHLORIN, GLYCEROL, SIROHYDROCHLORIN COBALTOCHELATASE
Authors:Ladakis, D, Brindley, A.A, Deery, E, Warren, M.J, Pickersgill, R.W.
Deposit date:2010-11-04
Release date:2010-12-22
Last modified:2024-09-18
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Evolution in a Family of Chelatases Facilitated by the Introduction of Active Site Asymmetry and Protein Oligomerization.
Proc.Natl.Acad.Sci.USA, 108, 2011

 

12>

226707

PDB entries from 2024-10-30

PDB statisticsPDBj update infoContact PDBjnumon