Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 541 件

6IIP
DownloadVisualize
BU of 6iip by Molmil
Apo-form structure of the HRP3 PWWP domain
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Hepatoma-derived growth factor-related protein 3, SULFATE ION
著者Wang, Z, Tian, W.
登録日2018-10-07
公開日2019-04-24
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (0.951 Å)
主引用文献Apo-form structure of the HRP3 PWWP domain
Nucleic Acids Res., 2019
5XFP
DownloadVisualize
BU of 5xfp by Molmil
Binary complex of PHF1 and a double stranded DNA
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, DNA (5'-D(*GP*GP*GP*CP*GP*GP*CP*CP*GP*CP*CP*CP*T)-3'), PHD finger protein 1, ...
著者Wang, Z, Li, H.
登録日2017-04-11
公開日2017-09-13
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Polycomb-like proteins link the PRC2 complex to CpG islands
Nature, 549, 2017
3V3L
DownloadVisualize
BU of 3v3l by Molmil
Crystal structure of human RNF146 WWE domain in complex with iso-ADPRibose
分子名称: 2'-O-(5-O-phosphono-alpha-D-ribofuranosyl)adenosine 5'-(dihydrogen phosphate), E3 ubiquitin-protein ligase RNF146
著者Wang, Z, Cheng, Z, Xu, W.
登録日2011-12-13
公開日2012-02-15
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Recognition of the iso-ADP-ribose moiety in poly(ADP-ribose) by WWE domains suggests a general mechanism for poly(ADP-ribosyl)ation-dependent ubiquitination.
Genes Dev., 26, 2012
5XFO
DownloadVisualize
BU of 5xfo by Molmil
Structure of the N-terminal domains of PHF1
分子名称: PHD finger protein 1, ZINC ION
著者Wang, Z, Li, H.
登録日2017-04-11
公開日2017-09-13
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Polycomb-like proteins link the PRC2 complex to CpG islands
Nature, 549, 2017
7WA9
DownloadVisualize
BU of 7wa9 by Molmil
Crystal structure of MSMEG_5634 from Mycobacterium smegmatis
分子名称: MSMEG_5634
著者Wang, Z, Zhang, W.
登録日2021-12-12
公開日2022-10-19
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献A Novel Acyl-AcpM-Binding Protein Confers Intrinsic Sensitivity to Fatty Acid Synthase Type II Inhibitors in Mycobacterium smegmatis
Front Microbiol, 13, 2022
5XFQ
DownloadVisualize
BU of 5xfq by Molmil
Ternary complex of PHF1, a DNA duplex and a histone peptide
分子名称: DNA (5'-D(*GP*GP*GP*CP*GP*GP*CP*CP*GP*CP*CP*CP*T)-3'), PHD finger protein 1, Peptide from Histone H3, ...
著者Wang, Z, Li, H.
登録日2017-04-11
公開日2017-09-13
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Polycomb-like proteins link the PRC2 complex to CpG islands
Nature, 549, 2017
6AF0
DownloadVisualize
BU of 6af0 by Molmil
Structure of Ctr9, Paf1 and Cdc73 ternary complex from Myceliophthora thermophila
分子名称: Cdc73 protein, Ctr9 protein, Paf1 protein
著者Wang, Z, Deng, P, Zhou, Y.
登録日2018-08-07
公開日2018-09-19
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.88 Å)
主引用文献Transcriptional elongation factor Paf1 core complex adopts a spirally wrapped solenoidal topology.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
5XFN
DownloadVisualize
BU of 5xfn by Molmil
Structure of the N-terminal domains of PHF1
分子名称: PHD finger protein 1, ZINC ION
著者Wang, Z, Li, H.
登録日2017-04-11
公開日2017-09-13
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Polycomb-like proteins link the PRC2 complex to CpG islands
Nature, 549, 2017
5XFR
DownloadVisualize
BU of 5xfr by Molmil
Ternary complex of MTF2, DNA and histone
分子名称: DNA (5'-D(*GP*GP*GP*CP*GP*GP*CP*CP*GP*CP*CP*CP*T)-3'), Metal-response element-binding transcription factor 2, Peptide from Histone H3.1, ...
著者Wang, Z, Li, H.
登録日2017-04-11
公開日2017-09-13
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Polycomb-like proteins link the PRC2 complex to CpG islands
Nature, 549, 2017
2LUP
DownloadVisualize
BU of 2lup by Molmil
RDC refined solution structure of double-stranded RNA binding domain of S. cerevisiae RNase III (rnt1p) in complex with the terminal RNA hairpin of snr47 precursor
分子名称: RNA (32-MER), Ribonuclease 3
著者Wang, Z, Feigon, J.
登録日2012-06-19
公開日2012-07-04
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structure of a yeast RNase III dsRBD complex with a noncanonical RNA substrate provides new insights into binding specificity of dsRBDs.
Structure, 19, 2011
2NRU
DownloadVisualize
BU of 2nru by Molmil
Crystal structure of IRAK-4
分子名称: 1-(3-HYDROXYPROPYL)-2-[(3-NITROBENZOYL)AMINO]-1H-BENZIMIDAZOL-5-YL PIVALATE, Interleukin-1 receptor-associated kinase 4, SULFATE ION
著者Wang, Z, Liu, J, Walker, N.P.C.
登録日2006-11-02
公開日2006-12-12
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structures of IRAK-4 kinase in complex with inhibitors: a serine/threonine kinase with tyrosine as a gatekeeper.
Structure, 14, 2006
2NRY
DownloadVisualize
BU of 2nry by Molmil
Crystal structure of IRAK-4
分子名称: STAUROSPORINE, interleukin-1 receptor-associated kinase 4
著者Wang, Z, Liu, J, Walker, N.P.C.
登録日2006-11-02
公開日2006-12-12
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Crystal structures of IRAK-4 kinase in complex with inhibitors: a serine/threonine kinase with tyrosine as a gatekeeper.
Structure, 14, 2006
7EW5
DownloadVisualize
BU of 7ew5 by Molmil
immune complex of HPV6 L1 pentamer and neutralizing antibody 13H5
分子名称: Heavy chain of 13H5, Light chain of 13H5, Major capsid protein L1
著者Wang, Z.P, Wang, D.N, Gu, Y, Li, S.W.
登録日2021-05-24
公開日2022-06-01
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (3.606 Å)
主引用文献structure of HPV6 L1 pentamer in complex with neutralizing antibody 13H5
To Be Published
2LBS
DownloadVisualize
BU of 2lbs by Molmil
Solution structure of double-stranded RNA binding domain of S. cerevisiae RNase III (Rnt1p) in complex with AAGU tetraloop hairpin
分子名称: RNA (32-MER), Ribonuclease 3
著者Wang, Z, Hartman, E, Roy, K, Chanfreau, G, Feigon, J.
登録日2011-04-06
公開日2011-08-31
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Structure of a Yeast RNase III dsRBD Complex with a Noncanonical RNA Substrate Provides New Insights into Binding Specificity of dsRBDs.
Structure, 19, 2011
6J71
DownloadVisualize
BU of 6j71 by Molmil
HuA21-scFv in complex with the extracellular domain(ECD) of HER2
分子名称: Receptor tyrosine-protein kinase erbB-2, anti-HER2 humanized antibody HuA21, beta-D-mannopyranose, ...
著者Wang, Z, Guo, G, Cheng, B, Zhu, Z, Niu, L, Zhang, H.
登録日2019-01-16
公開日2019-02-27
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.918 Å)
主引用文献Structural insight into a matured humanized monoclonal antibody HuA21 against HER2-overexpressing cancer cells.
Acta Crystallogr D Struct Biol, 75, 2019
7D8G
DownloadVisualize
BU of 7d8g by Molmil
The crystal structure of nucleotide phosphatase Sa1684 from Staphylococcus aureus
分子名称: CITRIC ACID, GLYCEROL, MAGNESIUM ION, ...
著者Wang, Z, Li, X.
登録日2020-10-08
公開日2021-03-17
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献The structural mechanism for the nucleoside tri- and diphosphate hydrolysis activity of Ntdp from Staphylococcus aureus.
Febs J., 288, 2021
7D8L
DownloadVisualize
BU of 7d8l by Molmil
The structure of nucleoside phosphatase Sa1684 complex with GTP analogue from Staphylococcus aureus
分子名称: 5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE, GLYCEROL, MAGNESIUM ION, ...
著者Wang, Z, Li, X.
登録日2020-10-08
公開日2021-03-17
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献The structural mechanism for the nucleoside tri- and diphosphate hydrolysis activity of Ntdp from Staphylococcus aureus.
Febs J., 288, 2021
7D8I
DownloadVisualize
BU of 7d8i by Molmil
Crystal structure of nucleoside phosphatase Sa1684 complex with ATP analogue from staphylococus aureus
分子名称: CALCIUM ION, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, UPF0374 protein SA1684
著者Wang, Z, Li, X.
登録日2020-10-08
公開日2021-03-17
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (1.62 Å)
主引用文献The structural mechanism for the nucleoside tri- and diphosphate hydrolysis activity of Ntdp from Staphylococcus aureus.
Febs J., 288, 2021
7D8Q
DownloadVisualize
BU of 7d8q by Molmil
The structure of nucleotide phosphatase Sa1684 complex with GDP analogue from Staphylococcus aureus
分子名称: MAGNESIUM ION, UPF0374 protein SAB1800c, [(2R,3R,4S,5S)-5-(2-azanyl-6-oxidanyl-purin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methyl bis(oxidanyl)phosphinothioyl hydrogen phosphate
著者Wang, Z, Li, X.
登録日2020-10-09
公開日2021-03-17
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献The structural mechanism for the nucleoside tri- and diphosphate hydrolysis activity of Ntdp from Staphylococcus aureus.
Febs J., 288, 2021
7F74
DownloadVisualize
BU of 7f74 by Molmil
Rv3094c in complex with FMN.
分子名称: FLAVIN MONONUCLEOTIDE, Rv3094c
著者Wang, Z.X, Ouyang, S.Y.
登録日2021-06-27
公開日2022-06-29
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Omics analysis of Mycobacterium tuberculosis isolates uncovers Rv3094c, an ethionamide metabolism-associated gene.
Commun Biol, 6, 2023
7F72
DownloadVisualize
BU of 7f72 by Molmil
Rv3094c in complex with FAD and ETH.
分子名称: 2-ethylpyridine-4-carboximidothioic acid, FLAVIN MONONUCLEOTIDE, Rv3094c
著者Wang, Z.X, Ouyang, S.Y.
登録日2021-06-27
公開日2022-07-13
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.64 Å)
主引用文献Omics analysis of Mycobacterium tuberculosis isolates uncovers Rv3094c, an ethionamide metabolism-associated gene.
Commun Biol, 6, 2023
8HCM
DownloadVisualize
BU of 8hcm by Molmil
zebrafish IRF-11 DBD complex with DNA
分子名称: DNA (5'-D(P*GP*CP*TP*TP*TP*CP*AP*CP*TP*TP*TP*CP*TP*A)-3'), DNA (5'-D(P*TP*AP*GP*AP*AP*AP*GP*TP*GP*AP*AP*AP*GP*C)-3'), Interferon regulatory factor
著者Wang, Z.X, Zhang, Y.A, Ouyang, S.Y.
登録日2022-11-02
公開日2024-05-15
最終更新日2024-09-04
実験手法X-RAY DIFFRACTION (2.59 Å)
主引用文献Crystal Structures of DNA-bound Fish IRF10 and IRF11 Reveal the Determinants of IFN Regulation.
J Immunol., 213, 2024
8HCS
DownloadVisualize
BU of 8hcs by Molmil
zebrafish IRF-11 DBD
分子名称: Interferon regulatory factor
著者Wang, Z.X, Zhang, Y.A, Ouyang, S.Y.
登録日2022-11-03
公開日2024-05-15
最終更新日2024-09-04
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献Crystal Structures of DNA-bound Fish IRF10 and IRF11 Reveal the Determinants of IFN Regulation.
J Immunol., 213, 2024
7DMO
DownloadVisualize
BU of 7dmo by Molmil
Crystal structures of two pericyclases catalyzing [4+2] cycloadditions
分子名称: Diels-Alderase
著者Wang, Z.D, Chi, C.B, Ma, M.
登録日2020-12-04
公開日2021-10-06
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal Structures of Fsa2 and Phm7 Catalyzing [4 + 2] Cycloaddition Reactions with Reverse Stereoselectivities in Equisetin and Phomasetin Biosynthesis.
Acs Omega, 6, 2021
7C5Z
DownloadVisualize
BU of 7c5z by Molmil
Crystal structure of spring viremia of carp virus phosphoprotein central domain
分子名称: Phosphoprotein
著者Wang, Z.X, Guan, H.X, Ouyang, S.Y, Zhang, Y.A.
登録日2020-05-21
公開日2020-08-05
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structural and Functional Characterization of the Phosphoprotein Central Domain of Spring Viremia of Carp Virus.
J.Virol., 94, 2020

226707

件を2024-10-30に公開中

PDB statisticsPDBj update infoContact PDBjnumon