Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 929 results

7A1V
DownloadVisualize
BU of 7a1v by Molmil
Crystal structure of YTHDF2 in complex with m1A
Descriptor: 6-AMINO-1-METHYLPURINE, GLYCEROL, SULFATE ION, ...
Authors:Wang, X, Caflisch, A.
Deposit date:2020-08-14
Release date:2021-08-25
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of YTHDF2 in complex with m1A
To Be Published
9INP
DownloadVisualize
BU of 9inp by Molmil
Human Pin1 (Peptidyl-prolyl cis-trans isomerase) catalytic domain in complex with a covalent inhibitor
Descriptor: CITRIC ACID, Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1, ~{N}-[(3~{R})-1,1-bis(oxidanylidene)thiolan-3-yl]-2-chloranyl-~{N}-(2,2-dimethylpropyl)-5-nitro-pyrimidin-4-amine
Authors:Wang, X.Y, Tian, M.Z, Zhou, J, Xu, B.L.
Deposit date:2024-07-08
Release date:2025-05-14
Method:X-RAY DIFFRACTION (2.57 Å)
Cite:Discovery of Novel Pyrimidine Derivatives as Human Pin1 Covalent Inhibitors.
Acs Med.Chem.Lett., 16, 2025
1HP3
DownloadVisualize
BU of 1hp3 by Molmil
C-TERMINAL TRUNCATION OF OMEGA-ATRACOTOXIN-HV2A (CT-HV2A)
Descriptor: OMEGA-ATRACOTOXIN-HV2A
Authors:Wang, X.-H, King, G.F.
Deposit date:2000-12-12
Release date:2002-12-11
Last modified:2024-11-13
Method:SOLUTION NMR
Cite:Discovery and structure of a potent and highly specific blocker of insect calcium channels
J.Biol.Chem., 276, 2001
1IB2
DownloadVisualize
BU of 1ib2 by Molmil
CRYSTAL STRUCTURE OF A PUMILIO-HOMOLOGY DOMAIN
Descriptor: BETA-MERCAPTOETHANOL, PUMILIO 1
Authors:Wang, X, Zamore, P.D, Hall, T.M.T.
Deposit date:2001-03-26
Release date:2001-05-09
Last modified:2025-03-26
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of a Pumilio homology domain.
Mol.Cell, 7, 2001
6OYL
DownloadVisualize
BU of 6oyl by Molmil
The structure of the PP2A B56 subunit KIF4A complex
Descriptor: Chromosome-associated kinesin KIF4A, Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit gamma isoform
Authors:Wang, X, Page, R, Peti, W.
Deposit date:2019-05-14
Release date:2020-03-25
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (3.15 Å)
Cite:A dynamic charge-charge interaction modulates PP2A:B56 substrate recruitment.
Elife, 9, 2020
5X6O
DownloadVisualize
BU of 5x6o by Molmil
Intact ATR/Mec1-ATRIP/Ddc2 complex
Descriptor: DNA damage checkpoint protein LCD1, Serine/threonine-protein kinase MEC1
Authors:Wang, X, Ran, T, Cai, G.
Deposit date:2017-02-22
Release date:2017-12-20
Last modified:2024-10-30
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:3.9 angstrom structure of the yeast Mec1-Ddc2 complex, a homolog of human ATR-ATRIP.
Science, 358, 2017
2JT8
DownloadVisualize
BU of 2jt8 by Molmil
Solution structure of the F153-to-5-flurotryptophan mutant of human cardiac troponin C
Descriptor: Troponin C, slow skeletal and cardiac muscles
Authors:Wang, X, Mercier, P, Letourneau, P, Sykes, B.D.
Deposit date:2007-07-20
Release date:2007-08-07
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Effects of Phe-to-Trp mutation and fluorotryptophan incorporation on the solution structure of cardiac troponin C, and analysis of its suitability as a potential probe for in situ NMR studies
Protein Sci., 14, 2005
4Y3R
DownloadVisualize
BU of 4y3r by Molmil
Endothiapepsin in complex with fragment 306
Descriptor: 2-chlorobenzyl carbamimidothioate, ACETATE ION, DIMETHYL SULFOXIDE, ...
Authors:Wang, X, Heine, A, Klebe, G.
Deposit date:2015-02-10
Release date:2016-02-17
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.13 Å)
Cite:Crystallographic Fragment Screening of an Entire Library
To Be Published
4Y5C
DownloadVisualize
BU of 4y5c by Molmil
Endothiapepsin in complex with fragment 267
Descriptor: 2,5-dimethyl-N-(pyridin-4-yl)furan-3-carboxamide, ACETATE ION, Endothiapepsin, ...
Authors:Wang, X, Heine, A, Klebe, G.
Deposit date:2015-02-11
Release date:2016-03-02
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.19 Å)
Cite:Crystallographic Fragment Sreening of an Entire Library
to be published
4Y45
DownloadVisualize
BU of 4y45 by Molmil
Endothiapepsin in complex with fragment 291
Descriptor: ACETATE ION, DIMETHYL SULFOXIDE, Endothiapepsin, ...
Authors:Wang, X, Heine, A, Klebe, G.
Deposit date:2015-02-10
Release date:2016-02-17
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.06 Å)
Cite:Crystallographic Fragment Screening of an Entire Library
To Be Published
4Y5G
DownloadVisualize
BU of 4y5g by Molmil
Endothiapepsin in complex with fragment 272
Descriptor: ACETATE ION, DIMETHYL SULFOXIDE, Endothiapepsin, ...
Authors:Wang, X, Heine, A, Klebe, G.
Deposit date:2015-02-11
Release date:2016-03-02
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (1.47 Å)
Cite:Crystallographic Fragment Sreening of an Entire Library
to be published
9J1I
DownloadVisualize
BU of 9j1i by Molmil
Apo structure of the F2Y224-FtmOx1 mutant with metal Iron
Descriptor: COBALT (II) ION, FE (II) ION, Verruculogen synthase
Authors:Wang, X.Y, Wang, J, Yan, W.P.
Deposit date:2024-08-05
Release date:2025-03-19
Method:X-RAY DIFFRACTION (2.11 Å)
Cite:Characterizing Y224 conformational flexibility in FtmOx1-catalysis using 19 F NMR spectroscopy.
Catalysis Science And Technology, 15, 2025
7MIZ
DownloadVisualize
BU of 7miz by Molmil
Atomic structure of cortical microtubule from Toxoplasma gondii
Descriptor: GUANOSINE-5'-DIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Wang, X, Brown, A, Sibley, L.D, Zhang, R.
Deposit date:2021-04-18
Release date:2021-06-02
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Cryo-EM structure of cortical microtubules from human parasite Toxoplasma gondii identifies their microtubule inner proteins.
Nat Commun, 12, 2021
5YDG
DownloadVisualize
BU of 5ydg by Molmil
Crystal structure of the Arabidopsis thaliana chloroplast RNA editing factors 2(MORF2)
Descriptor: Multiple organellar RNA editing factor 2, chloroplastic
Authors:Wang, X, Yang, J.Y, Wang, Y.L, Gao, Y.S.
Deposit date:2017-09-13
Release date:2017-12-20
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.405 Å)
Cite:Crystal structure of the chloroplast RNA editing factor MORF2
Biochem. Biophys. Res. Commun., 495, 2018
9J1H
DownloadVisualize
BU of 9j1h by Molmil
The binary complex structure of F2Y224-FtmOx1 mutant with alpha-ketoglutarate
Descriptor: 2-OXOGLUTARIC ACID, COBALT (II) ION, GLYCEROL, ...
Authors:Wang, X.Y, Wang, J, Yan, W.P.
Deposit date:2024-08-05
Release date:2025-03-19
Method:X-RAY DIFFRACTION (2 Å)
Cite:Characterizing Y224 conformational flexibility in FtmOx1-catalysis using 19 F NMR spectroscopy.
Catalysis Science And Technology, 15, 2025
6UWL
DownloadVisualize
BU of 6uwl by Molmil
GltPh in complex with L-aspartate and sodium ions in intermediate outward-facing state
Descriptor: ASPARTIC ACID, Glutamate transporter homolog, [(2~{R})-1-[2-azanylethoxy(oxidanyl)phosphoryl]oxy-3-hexadecanoyloxy-propan-2-yl] (~{Z})-octadec-9-enoate
Authors:Wang, X, Boudker, O.
Deposit date:2019-11-05
Release date:2020-04-22
Last modified:2024-12-25
Method:ELECTRON MICROSCOPY (3.62 Å)
Cite:Use of paramagnetic 19 F NMR to monitor domain movement in a glutamate transporter homolog.
Nat.Chem.Biol., 16, 2020
1PSJ
DownloadVisualize
BU of 1psj by Molmil
ACIDIC PHOSPHOLIPASE A2 FROM AGKISTRODON HALYS PALLAS
Descriptor: CALCIUM ION, PHOSPHOLIPASE A2
Authors:Wang, X.Q, Lin, Z.J.
Deposit date:1995-05-24
Release date:1996-07-11
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of an acidic phospholipase A2 from the venom of Agkistrodon halys pallas at 2.0 A resolution.
J.Mol.Biol., 255, 1996
6UWF
DownloadVisualize
BU of 6uwf by Molmil
GltPh in complex with L-aspartate and sodium ions in outward-facing state
Descriptor: ASPARTIC ACID, Glutamate transporter homolog, [(2~{R})-1-[2-azanylethoxy(oxidanyl)phosphoryl]oxy-3-hexadecanoyloxy-propan-2-yl] (~{Z})-octadec-9-enoate
Authors:Wang, X, Boudker, O.
Deposit date:2019-11-05
Release date:2020-06-03
Last modified:2024-12-25
Method:ELECTRON MICROSCOPY (3.08 Å)
Cite:Use of paramagnetic 19 F NMR to monitor domain movement in a glutamate transporter homolog.
Nat.Chem.Biol., 16, 2020
8YM2
DownloadVisualize
BU of 8ym2 by Molmil
Crystal structure of AIDA-1 PTB domain in complex with SynGAP NPxF motif
Descriptor: Ankyrin repeat and sterile alpha motif domain-containing protein 1B, Ras/Rap GTPase-activating protein SynGAP
Authors:Wang, X, Wang, Y, Cai, Q, Zhang, M.
Deposit date:2024-03-08
Release date:2024-05-29
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (2 Å)
Cite:AIDA-1/ANKS1B Binds to the SynGAP Family RasGAPs with High Affinity and Specificity.
J.Mol.Biol., 436, 2024
3G36
DownloadVisualize
BU of 3g36 by Molmil
Crystal structure of the human DPY-30-like C-terminal domain
Descriptor: (2R,3S)-1,4-DIMERCAPTOBUTANE-2,3-DIOL, (2S,3S)-1,4-DIMERCAPTOBUTANE-2,3-DIOL, 2,3-DIHYDROXY-1,4-DITHIOBUTANE, ...
Authors:Wang, X, Lou, Z, Bartlam, M, Rao, Z.
Deposit date:2009-02-02
Release date:2009-06-30
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Crystal structure of the C-terminal domain of human DPY-30-like protein: A component of the histone methyltransferase complex
J.Mol.Biol., 390, 2009
6XS6
DownloadVisualize
BU of 6xs6 by Molmil
SARS-CoV-2 Spike D614G variant, minus RBD
Descriptor: Spike glycoprotein
Authors:Wang, X, Egri, S.B, Dudkina, N, Luban, J, Shen, K.
Deposit date:2020-07-15
Release date:2020-07-22
Last modified:2025-05-14
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Structural and Functional Analysis of the D614G SARS-CoV-2 Spike Protein Variant.
Cell, 183, 2020
6H22
DownloadVisualize
BU of 6h22 by Molmil
Crystal structure of Mdm2 bound to a stapled peptide
Descriptor: 12-(dimethylamino)-3,10-diethyl-N,N,N-trimethyl-3,10-dihydrodibenzo[3,4:7,8]cycloocta[1,2-d:5,6-d']bis([1,2,3]triazole)-5-aminium, E3 ubiquitin-protein ligase Mdm2, Stapled peptide
Authors:Wang, X, Sharma, K, Spring, D.R, Hyvonen, M.
Deposit date:2018-07-12
Release date:2019-07-31
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.006 Å)
Cite:Water-soluble, stable and azide-reactive strained dialkynes for biocompatible double strain-promoted click chemistry.
Org.Biomol.Chem., 17, 2019
7P3O
DownloadVisualize
BU of 7p3o by Molmil
Solution structures of HIV-1 and SIVmac p6 and their interaction with accessory proteins Vpr and Vpx in the presence of DPC micelles
Descriptor: Gag protein
Authors:Wang, X, Nonin-Lecomte, S, Bouaziz, S.
Deposit date:2021-07-08
Release date:2023-01-18
Last modified:2024-03-27
Method:SOLUTION NMR
Cite:Solution structures of HIV-1 and SIVmac p6 and their interaction with accessory proteins Vpr and Vpx in the presence of DPC micelles
To Be Published
7P3M
DownloadVisualize
BU of 7p3m by Molmil
Solution structures of HIV-1 and SIVmac p6 and their interaction with accessory proteins Vpr and Vpx in the presence of DPC micelles
Descriptor: Gag polyprotein
Authors:Wang, X, Nonin-Lecomte, S, Bouaziz, S.
Deposit date:2021-07-08
Release date:2023-01-18
Last modified:2024-03-27
Method:SOLUTION NMR
Cite:Solution structures of HIV-1 and SIVmac p6 and their interaction with accessory proteins Vpr and Vpx in the presence of DPC micelles
To Be Published
7P3P
DownloadVisualize
BU of 7p3p by Molmil
Solution structures of HIV-1 and SIVmac p6 and their interaction with accessory proteins Vpr and Vpx in the presence of DPC micelles
Descriptor: Gag polyprotein
Authors:Wang, X, Nonin-Lecomte, S, Bouaziz, S.
Deposit date:2021-07-08
Release date:2023-01-18
Last modified:2024-03-27
Method:SOLUTION NMR
Cite:Solution structures of HIV-1 and SIVmac p6 and their interaction with accessory proteins Vpr and Vpx in the presence of DPC micelles
To Be Published

237423

PDB entries from 2025-06-11

PDB statisticsPDBj update infoContact PDBjnumon