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PDB: 250 results

5YGU
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BU of 5ygu by Molmil
Crystal structure of Escherichia coli (strain K12) mRNA Decapping Complex RppH-DapF
Descriptor: Diaminopimelate epimerase, IODIDE ION, L(+)-TARTARIC ACID, ...
Authors:Wang, Q, Guan, Z.Y, Zhang, D.L, Zou, T.T, Yin, P.
Deposit date:2017-09-27
Release date:2018-06-06
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.298 Å)
Cite:DapF stabilizes the substrate-favoring conformation of RppH to stimulate its RNA-pyrophosphohydrolase activity in Escherichia coli.
Nucleic Acids Res., 46, 2018
5YWJ
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BU of 5ywj by Molmil
Global regulatory element SarX
Descriptor: HTH-type transcriptional regulator SarX
Authors:Wang, Q.
Deposit date:2017-11-29
Release date:2018-12-05
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.102 Å)
Cite:Crystal structure of SarX from Staphylococcus aureus
To Be Published
5ZY5
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BU of 5zy5 by Molmil
spCOMT apo structure
Descriptor: Probable catechol O-methyltransferase 1
Authors:Wang, Q, Xu, L.
Deposit date:2018-05-22
Release date:2019-05-22
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.295 Å)
Cite:structural and functional investigations of spCOMT
To Be Published
7E4H
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BU of 7e4h by Molmil
Cryo-EM structure of the yeast mitochondrial SAM-Tom40 complex at 3.0 angstrom
Descriptor: Mitochondrial import receptor subunit TOM40, Sorting assembly machinery 35 kDa subunit, Sorting assembly machinery 37 kDa subunit, ...
Authors:Wang, Q, Guan, Z.Y, Qi, L.B, Yan, C.Y, Yin, P.
Deposit date:2021-02-13
Release date:2021-09-01
Last modified:2022-02-16
Method:ELECTRON MICROSCOPY (3.01 Å)
Cite:Structural insight into the SAM-mediated assembly of the mitochondrial TOM core complex.
Science, 373, 2021
7E4I
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BU of 7e4i by Molmil
Cryo-EM structure of the yeast mitochondrial SAM-Tom40/Tom5/Tom6 complex at 3.0 angstrom
Descriptor: Mitochondrial import receptor subunit TOM40, Mitochondrial import receptor subunit TOM5, Mitochondrial import receptor subunit TOM6, ...
Authors:Wang, Q, Guan, Z.Y, Qi, L.B, Yan, C.Y, Yin, P.
Deposit date:2021-02-13
Release date:2021-09-01
Last modified:2022-02-16
Method:ELECTRON MICROSCOPY (3.05 Å)
Cite:Structural insight into the SAM-mediated assembly of the mitochondrial TOM core complex.
Science, 373, 2021
6K87
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BU of 6k87 by Molmil
The closed state of RGLG1 VWA domain with MIDAS is occupied by water
Descriptor: E3 ubiquitin-protein ligase RGLG1
Authors:Wang, Q, Wu, Y.
Deposit date:2019-06-11
Release date:2020-06-24
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.502 Å)
Cite:The closed state of RGLG1 VWA domain with MIDAS is occupied by water
To Be Published
6K82
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BU of 6k82 by Molmil
RGLG1 mutant-D338A E378A
Descriptor: E3 ubiquitin-protein ligase RGLG1, MAGNESIUM ION, SODIUM ION
Authors:Wang, Q, Wu, Y.
Deposit date:2019-06-11
Release date:2020-06-24
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.402 Å)
Cite:RGLG1 mutant-D338A E378A
To Be Published
6K89
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BU of 6k89 by Molmil
The closed state of RGLG1 VWA domain
Descriptor: E3 ubiquitin-protein ligase RGLG1, MAGNESIUM ION, SODIUM ION
Authors:Wang, Q, Wu, Y.
Deposit date:2019-06-11
Release date:2020-06-24
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.689 Å)
Cite:The closed state of RGLG1 VWA domain
To Be Published
6K8E
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BU of 6k8e by Molmil
Global regulatory element SarX
Descriptor: HTH-type transcriptional regulator SarX
Authors:Wang, Q.
Deposit date:2019-06-11
Release date:2020-06-17
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.002 Å)
Cite:Crystal structure of SarX from Staphylococcus aureus
To Be Published
6K85
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BU of 6k85 by Molmil
The closed state of RGLG1 mutant-D338A
Descriptor: E3 ubiquitin-protein ligase RGLG1, MAGNESIUM ION
Authors:Wang, Q, Wu, Y.
Deposit date:2019-06-11
Release date:2020-06-24
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.606 Å)
Cite:The closed state of RGLG1 mutant-D338A
To Be Published
6K8A
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BU of 6k8a by Molmil
RGLG1 VWA domain with MIDAS is occupied by water
Descriptor: CALCIUM ION, E3 ubiquitin-protein ligase RGLG1
Authors:Wang, Q, Wu, Y.
Deposit date:2019-06-11
Release date:2020-06-24
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:RGLG1 VWA domain with MIDAS is occupied by water
To Be Published
6K88
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BU of 6k88 by Molmil
RGLG1 MIDAS binds calcium ion
Descriptor: CALCIUM ION, E3 ubiquitin-protein ligase RGLG1
Authors:Wang, Q, Wu, Y.
Deposit date:2019-06-11
Release date:2020-06-24
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.788 Å)
Cite:RGLG1 MIDAS binds calcium ion
To Be Published
6K83
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BU of 6k83 by Molmil
Structure of RGLG1 mutant-D207G
Descriptor: CALCIUM ION, E3 ubiquitin-protein ligase RGLG1, MAGNESIUM ION
Authors:Wang, Q, Wu, Y.
Deposit date:2019-06-11
Release date:2020-06-24
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.39 Å)
Cite:RGLG1 mutant-D207G
To Be Published
6K86
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BU of 6k86 by Molmil
The closed state of RGLG1 mutant-E378A
Descriptor: E3 ubiquitin-protein ligase RGLG1, MAGNESIUM ION, SODIUM ION
Authors:Wang, Q, Wu, Y.
Deposit date:2019-06-11
Release date:2020-06-24
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.593 Å)
Cite:The closed state of RGLG1 mutant-E378A
To Be Published
6K8B
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BU of 6k8b by Molmil
The open state of RGLG1 VWA domain
Descriptor: CALCIUM ION, E3 ubiquitin-protein ligase RGLG1, MAGNESIUM ION
Authors:Wang, Q, Wu, Y.
Deposit date:2019-06-11
Release date:2020-06-24
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.21 Å)
Cite:The open state of RGLG1 VWA domain
To Be Published
7VG3
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BU of 7vg3 by Molmil
Cryo-EM structure of Arabidopsis DCL3 in complex with a 30-bp RNA
Descriptor: CALCIUM ION, Dicer-like 3, TAS1a RNA forward strand (5'-phosphorylated), ...
Authors:Wang, Q, Du, J.
Deposit date:2021-09-14
Release date:2021-10-27
Last modified:2021-12-15
Method:ELECTRON MICROSCOPY (3.73 Å)
Cite:Mechanism of siRNA production by a plant Dicer-RNA complex in dicing-competent conformation.
Science, 374, 2021
7VG2
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BU of 7vg2 by Molmil
Cryo-EM structure of Arabidopsis DCL3 in complex with a 40-bp RNA
Descriptor: CALCIUM ION, Dicer-like 3, TAS1a forward strand (5'-phosphorylation), ...
Authors:Wang, Q, Du, J.
Deposit date:2021-09-14
Release date:2021-10-27
Last modified:2021-12-15
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Mechanism of siRNA production by a plant Dicer-RNA complex in dicing-competent conformation.
Science, 374, 2021
7Y9K
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BU of 7y9k by Molmil
Crystal structure of P450 BM3-TMK from Bacillus megaterium
Descriptor: Bifunctional cytochrome P450/NADPH--P450 reductase, PROTOPORPHYRIN IX CONTAINING FE
Authors:Wang, Q, Zhang, L.L, Liu, W.D, Huang, J.-W, Yang, Y, Chen, C.-C, Guo, R.-T.
Deposit date:2022-06-25
Release date:2023-06-28
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.23 Å)
Cite:Engineering of a P450-based Kemp eliminase with a new mechanism
Chinese J Catal, 47, 2023
7Y9J
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BU of 7y9j by Molmil
Crystal structure of P450 BM3-TMK from Bacillus megaterium in complex with 5-nitro-1,2-benzisoxazole
Descriptor: 5-nitro-1,2-benzoxazole, Bifunctional cytochrome P450/NADPH--P450 reductase, PROTOPORPHYRIN IX CONTAINING FE
Authors:Wang, Q, Zhang, L.L, Liu, W.D, Huang, J.-W, Yang, Y, Chen, C.-C, Guo, R.-T.
Deposit date:2022-06-24
Release date:2023-06-28
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:Engineering of a P450-based Kemp eliminase with a new mechanism
Chinese J Catal, 47, 2023
7D58
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BU of 7d58 by Molmil
cryo-EM structure of human RNA polymerase III in elongating state
Descriptor: DNA-directed RNA polymerase III subunit RPC1, DNA-directed RNA polymerase III subunit RPC10, DNA-directed RNA polymerase III subunit RPC2, ...
Authors:Wang, Q, Wan, F, Lan, P, Wu, J, Lei, M.
Deposit date:2020-09-25
Release date:2021-02-17
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Structural insights into transcriptional regulation of human RNA polymerase III.
Nat.Struct.Mol.Biol., 28, 2021
7D59
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BU of 7d59 by Molmil
cryo-EM structure of human RNA polymerase III in apo state
Descriptor: DNA-directed RNA polymerase III subunit RPC1, DNA-directed RNA polymerase III subunit RPC10, DNA-directed RNA polymerase III subunit RPC2, ...
Authors:Wang, Q, Wan, F, Lan, P, Wu, J, Lei, M.
Deposit date:2020-09-25
Release date:2021-02-17
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Structural insights into transcriptional regulation of human RNA polymerase III.
Nat.Struct.Mol.Biol., 28, 2021
7XL7
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BU of 7xl7 by Molmil
Function And Structure Research of Salmonella typhimurium Unknown Functional Protein MicN
Descriptor: Uncharacterized protein
Authors:Wang, Q, Li, B.Q.
Deposit date:2022-04-21
Release date:2023-05-03
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Function And Structure Research of Salmonella typhimurium Unknown Functional Protein MicN
To Be Published
7Y9L
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BU of 7y9l by Molmil
Crystal structure of P450 BM3-2F from Bacillus megaterium in complex with 2-Hydroxy-5-Nitrobenzonitrile
Descriptor: 5-nitro-2-oxidanyl-benzenecarbonitrile, Bifunctional cytochrome P450/NADPH--P450 reductase, NICKEL (II) ION, ...
Authors:Wang, Q, Zhang, L.L, Liu, W.D, Huang, J.-W, Yang, Y, Chen, C.-C, Guo, R.-T.
Deposit date:2022-06-25
Release date:2023-07-12
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Crystal structure of P450 BM3-2F from Bacillus megaterium in complex with 2-Hydroxy-5-Nitrobenzonitrile
to be published
7Y9M
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BU of 7y9m by Molmil
Crystal structure of P450 BM3-2F from Bacillus megaterium
Descriptor: Bifunctional cytochrome P450/NADPH--P450 reductase, IMIDAZOLE, PROTOPORPHYRIN IX CONTAINING FE
Authors:Wang, Q, Zhang, L.L, Liu, W.D, Huang, J.-W, Yang, Y, Chen, C.-C, Guo, R.-T.
Deposit date:2022-06-25
Release date:2023-07-12
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.16 Å)
Cite:Crystal structure of P450 BM3-2F from Bacillus megaterium
to be published
7BTF
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BU of 7btf by Molmil
SARS-CoV-2 RNA-dependent RNA polymerase in complex with cofactors in reduced condition
Descriptor: Non-structural protein 7, Non-structural protein 8, RNA-directed RNA polymerase, ...
Authors:Gao, Y, Yan, L, Huang, Y, Liu, F, Cao, L, Wang, T, Wang, Q, Lou, Z, Rao, Z.
Deposit date:2020-04-01
Release date:2020-04-08
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (2.95 Å)
Cite:Structure of the RNA-dependent RNA polymerase from COVID-19 virus.
Science, 368, 2020

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PDB entries from 2024-05-29

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