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PDB: 59 件
4F20
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BU of 4f20 by Molmil
Crystal structures reveal the multi-ligand binding mechanism of the Staphylococcus aureus ClfB
分子名称: Clumping factor B, MAGNESIUM ION, peptide from Dermokine
著者Yang, M.J, Xiang, H, Wang, J.W, Liu, B, Chen, Y.G, Liu, L, Deng, X.M, Feng, Y.
登録日2012-05-07
公開日2012-08-08
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.502 Å)
主引用文献Crystal Structures Reveal the Multi-Ligand Binding Mechanism of Staphylococcus aureus ClfB
Plos Pathog., 8, 2012
8XAS
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BU of 8xas by Molmil
Crystal structure of AtARR1-DBD in complex with a DNA fragment
分子名称: DNA (50-MER), Two-component response regulator ARR1
著者Li, J.X, Zhou, C.M, zhang, P, Wang, J.W.
登録日2023-12-05
公開日2024-01-24
実験手法X-RAY DIFFRACTION (2.346 Å)
主引用文献The structure of B-ARR reveals the molecular basis of transcriptional activation by cytokinin.
Proc.Natl.Acad.Sci.USA, 121, 2024
8XAT
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BU of 8xat by Molmil
Crystal structure of AtARR1(RD-DBD)
分子名称: Two-component response regulator ARR1
著者Li, J.X, Zhou, C.M, Zhang, P, Wang, J.W.
登録日2023-12-05
公開日2024-01-24
実験手法X-RAY DIFFRACTION (2.205 Å)
主引用文献The structure of B-ARR reveals the molecular basis of transcriptional activation by cytokinin.
Proc.Natl.Acad.Sci.USA, 121, 2024
8XCK
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BU of 8xck by Molmil
Closed state of central tail fiber of bacteriophage lambda
分子名称: Peptidyl-prolyl cis-trans isomerase A, Tip attachment protein J
著者Ge, X.F, Wang, J.W.
登録日2023-12-09
公開日2024-05-01
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (2.75 Å)
主引用文献Structural mechanism of bacteriophage lambda tail's interaction with the bacterial receptor.
Nat Commun, 15, 2024
8XCJ
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BU of 8xcj by Molmil
Open State of central tail fiber of bacteriophage lambda upon binding to LamB (gpJ713-LamB complex)
分子名称: Maltoporin, Tip attachment protein J
著者Ge, X.F, Wang, J.W.
登録日2023-12-09
公開日2024-05-01
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (2.98 Å)
主引用文献Structural mechanism of bacteriophage lambda tail's interaction with the bacterial receptor.
Nat Commun, 15, 2024
8XCG
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BU of 8xcg by Molmil
Tail tip complex of bacteriophage lambda in the open state
分子名称: IRON/SULFUR CLUSTER, Tail tip assembly protein I, Tail tip protein L, ...
著者Ge, X.F, Wang, J.W.
登録日2023-12-09
公開日2024-05-01
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (3.46 Å)
主引用文献Structural mechanism of bacteriophage lambda tail's interaction with the bacterial receptor.
Nat Commun, 15, 2024
8XCI
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BU of 8xci by Molmil
Open state of central tail fiber of bacteriophage lambda upon binding to LamB
分子名称: Tip attachment protein J
著者Ge, X.F, Wang, J.W.
登録日2023-12-09
公開日2024-05-01
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (3.57 Å)
主引用文献Structural mechanism of bacteriophage lambda tail's interaction with the bacterial receptor.
Nat Commun, 15, 2024
6IIL
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BU of 6iil by Molmil
USP14 catalytic domain bind to IU1-47
分子名称: 1-[1-(4-chlorophenyl)-2,5-dimethyl-1H-pyrrol-3-yl]-2-(piperidin-1-yl)ethan-1-one, Ubiquitin carboxyl-terminal hydrolase 14
著者Mei, Z.Q, Wang, Y.W, Wang, F, Wang, J.W, He, W, Ding, S, Li, J.W.
登録日2018-10-07
公開日2018-12-12
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Small molecule inhibitors reveal allosteric regulation of USP14 via steric blockade.
Cell Res., 28, 2018
3PZ7
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BU of 3pz7 by Molmil
Crystal structure of Ccd1-DIX domain
分子名称: 1,2-ETHANEDIOL, Dixin
著者Liu, Y.T, Wang, J.W, Chen, L, Wu, J.W.
登録日2010-12-14
公開日2010-12-29
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.441 Å)
主引用文献Molecular basis of WNT Activation via the DIX-domain protein CCD1
To be Published
4DXW
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BU of 4dxw by Molmil
Crystal structure of NavRh, a voltage-gated sodium channel
分子名称: 1,2-DIMYRISTOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, CALCIUM ION, Ion transport protein, ...
著者Zhang, X, Ren, W.L, Yan, C.Y, Wang, J.W, Yan, N.
登録日2012-02-28
公開日2012-05-23
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (3.052 Å)
主引用文献Crystal structure of an orthologue of the NaChBac voltage-gated sodium channel
Nature, 486, 2012
3J9B
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BU of 3j9b by Molmil
Electron cryo-microscopy of an RNA polymerase
分子名称: Polymerase, Polymerase basic protein 2, RNA (5'-R(*UP*UP*UP*UP*UP*A)-3'), ...
著者Chang, S.H, Sun, D.P, Liang, H.H, Wang, J, Li, J, Guo, L, Wang, X.L, Guan, C.C, Boruah, B.M, Yuan, L.M, Feng, F, Yang, M.R, Wojdyla, J, Wang, J.W, Wang, M.T, Wang, H.W, Liu, Y.F.
登録日2014-12-16
公開日2015-02-18
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (4.3 Å)
主引用文献Cryo-EM Structure of Influenza Virus RNA Polymerase Complex at 4.3 angstrom Resolution.
Mol.Cell, 2015
7D0F
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BU of 7d0f by Molmil
cryo-EM structure of a pre-catalytic group II intron RNP
分子名称: Group II intron-encoded protein LtrA, RNA (738-MER)
著者Liu, N, Dong, X.L, Hu, C.X, Zeng, J.W, Wang, J.W, Wang, J, Wang, H.W, Belfort, M.
登録日2020-09-10
公開日2020-09-30
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (5 Å)
主引用文献Exon and protein positioning in a pre-catalytic group II intron RNP primed for splicing.
Nucleic Acids Res., 48, 2020
7D0G
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BU of 7d0g by Molmil
Cryo-EM structure of a pre-catalytic group II intron
分子名称: Group II intron-encoded protein LtrA, RNA (714-MER)
著者Liu, N, Dong, X.L, Hu, C.X, Zeng, J.W, Wang, J.W, Wang, J, Wang, H.W, Belfort, M.
登録日2020-09-10
公開日2020-09-30
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (5 Å)
主引用文献Exon and protein positioning in a pre-catalytic group II intron RNP primed for splicing.
Nucleic Acids Res., 48, 2020
7D1A
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BU of 7d1a by Molmil
cryo-EM structure of a group II intron RNP complexed with its reverse transcriptase
分子名称: Group II intron-encoded protein LtrA, RNA (5'-R(P*CP*AP*CP*AP*UP*CP*CP*AP*UP*AP*AP*C)-3'), RNA (692-MER)
著者Liu, N, Dong, X.L, Hu, C.X, Zeng, J.W, Wang, J.W, Wang, J, Wang, H.W, Belfort, M.
登録日2020-09-14
公開日2020-10-21
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Exon and protein positioning in a pre-catalytic group II intron RNP primed for splicing.
Nucleic Acids Res., 48, 2020
3V6P
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BU of 3v6p by Molmil
Crystal structure of the DNA-binding domain of dHax3, a TAL effector
分子名称: dHax3
著者Deng, D, Yan, C.Y, Pan, X.J, Wang, J.W, Shi, Y.G, Yan, N.
登録日2011-12-20
公開日2012-01-18
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.401 Å)
主引用文献Structural Basis for Sequence-Specific Recognition of DNA by TAL Effectors
Science, 2012
3V6T
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BU of 3v6t by Molmil
Crystal structure of the DNA-bound dHax3, a TAL effector, at 1.85 angstrom
分子名称: DNA (5'-D(*AP*GP*AP*GP*AP*GP*AP*TP*AP*AP*AP*GP*GP*GP*AP*CP*A)-3'), DNA (5'-D(*TP*GP*TP*CP*CP*CP*TP*TP*TP*AP*TP*CP*TP*CP*TP*CP*T)-3'), dHax3
著者Deng, D, Yan, C.Y, Pan, X.J, Wang, J.W, Yan, N, Shi, Y.G.
登録日2011-12-20
公開日2012-01-18
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Structural Basis for Sequence-Specific Recognition of DNA by TAL Effectors
Science, 2012
3PXI
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BU of 3pxi by Molmil
Structure of MecA108:ClpC
分子名称: Adapter protein mecA 1, Negative regulator of genetic competence ClpC/MecB
著者Wang, F, Mei, Z.Q, Wang, J.W, Shi, Y.G.
登録日2010-12-09
公開日2011-03-16
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (6.926 Å)
主引用文献Structure and mechanism of the hexameric MecA-ClpC molecular machine.
Nature, 471, 2011
2Y1R
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BU of 2y1r by Molmil
Structure of MecA121 & ClpC N-domain complex
分子名称: ADAPTER PROTEIN MECA 1, NEGATIVE REGULATOR OF GENETIC COMPETENCE CLPC/MECB, S,R MESO-TARTARIC ACID
著者Wang, F, Mei, Z.Q, Wang, J.W, Shi, Y.G.
登録日2010-12-10
公開日2011-03-16
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.595 Å)
主引用文献Structure and Mechanism of the Hexameric Meca-Clpc Molecular Machine.
Nature, 471, 2011
2Y1Q
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BU of 2y1q by Molmil
Crystal Structure of ClpC N-terminal Domain
分子名称: NEGATIVE REGULATOR OF GENETIC COMPETENCE CLPC/MECB, SULFATE ION
著者Wang, F, Mei, Z.Q, Wang, J.W, Shi, Y.G.
登録日2010-12-10
公開日2011-03-16
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structure and Mechanism of the Hexameric Meca-Clpc Molecular Machine.
Nature, 471, 2011
4DJI
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BU of 4dji by Molmil
Structure of glutamate-GABA antiporter GadC
分子名称: Probable glutamate/gamma-aminobutyrate antiporter
著者Ma, D, Lu, P.L, Yan, C.Y, Fan, C, Yin, P, Wang, J.W, Shi, Y.G.
登録日2012-02-02
公開日2012-03-14
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (3.187 Å)
主引用文献Structure and mechanism of a glutamate-GABA antiporter
Nature, 483, 2012
4DJK
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BU of 4djk by Molmil
Structure of glutamate-GABA antiporter GadC
分子名称: Probable glutamate/gamma-aminobutyrate antiporter
著者Ma, D, Lu, P.L, Yan, C.Y, Fan, C, Yin, P, Wang, J.W, Shi, Y.G.
登録日2012-02-02
公開日2012-03-14
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (3.097 Å)
主引用文献Structure and mechanism of a glutamate-GABA antiporter
Nature, 483, 2012
6IIM
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BU of 6iim by Molmil
USP14 catalytic domain with IU1-206
分子名称: 1-[1-(4-chlorophenyl)-2,5-dimethyl-1H-pyrrol-3-yl]-2-(4-hydroxypiperidin-1-yl)ethan-1-one, Ubiquitin carboxyl-terminal hydrolase 14
著者Mei, Z.Q, Wang, J.W, Wang, F, Wang, Y.W.
登録日2018-10-07
公開日2018-12-12
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.21 Å)
主引用文献Small molecule inhibitors reveal allosteric regulation of USP14 via steric blockade.
Cell Res., 28, 2018
6IIN
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BU of 6iin by Molmil
USP14 catalytic domain with IU1-248
分子名称: 4-{3-[(4-hydroxypiperidin-1-yl)acetyl]-2,5-dimethyl-1H-pyrrol-1-yl}benzonitrile, Ubiquitin carboxyl-terminal hydrolase 14
著者Mei, Z.Q, Wang, J.W, Wang, F, Wang, Y.W.
登録日2018-10-07
公開日2018-12-19
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.53 Å)
主引用文献Small molecule inhibitors reveal allosteric regulation of USP14 via steric blockade.
Cell Res., 28, 2018
7XTG
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BU of 7xtg by Molmil
Cryo-EM structure of Listeria monocytogenes man-PTS complexed with pediocin PA-1
分子名称: Bacteriocin curvacin-A, Mannose permease IIC component, Mannose permease IID component, ...
著者Zeng, J.W, Wang, J.W, Zhu, L.Y.
登録日2022-05-17
公開日2023-06-07
最終更新日2023-12-20
実験手法ELECTRON MICROSCOPY (2.2 Å)
主引用文献Structural Basis of the Immunity Mechanisms of Pediocin-like Bacteriocins.
Appl.Environ.Microbiol., 88, 2022
4LGI
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BU of 4lgi by Molmil
N-terminal truncated NleC structure
分子名称: Uncharacterized protein
著者Li, W.Q, Liu, Y.X, Sheng, X.L, Yan, C.Y, Wang, J.W.
登録日2013-06-28
公開日2014-01-15
最終更新日2015-02-25
実験手法X-RAY DIFFRACTION (2.301 Å)
主引用文献Structure and mechanism of a type III secretion protease, NleC
Acta Crystallogr.,Sect.D, 70, 2014

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