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PDB: 296 results

2DCG
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MOLECULAR STRUCTURE OF A LEFT-HANDED DOUBLE HELICAL DNA FRAGMENT AT ATOMIC RESOLUTION
Descriptor: DNA (5'-D(*CP*GP*CP*GP*CP*G)-3'), MAGNESIUM ION, SPERMINE
Authors:Wang, A.H.-J, Quigley, G.J, Kolpak, F.J, Crawford, J.L, Van Boom, J.H, Van Der Marel, G.A, Rich, A.
Deposit date:1988-08-29
Release date:1989-01-09
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (0.9 Å)
Cite:Molecular structure of a left-handed double helical DNA fragment at atomic resolution.
Nature, 282, 1979
1VS2
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Interactions of quinoxaline antibiotic and DNA: the molecular structure of a TRIOSTIN A-D(GCGTACGC) complex
Descriptor: 2-CARBOXYQUINOXALINE, 5'-D(*GP*CP*GP*TP*AP*CP*GP*C)-3', TRIOSTIN A
Authors:Wang, A.H.-J, Ughetto, G, Quigley, G.J, Rich, A.
Deposit date:1986-10-21
Release date:2006-06-27
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:Interactions of Quinoxaline Antibiotic and DNA: The Molecular Structure of a Triostin A-D(Gcgtacgc) Complex.
J.Biomol.Struct.Dyn., 4, 1986
1VTG
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THE MOLECULAR STRUCTURE OF A DNA-TRIOSTIN A COMPLEX
Descriptor: 2-CARBOXYQUINOXALINE, DNA (5'-D(*CP*GP*TP*AP*CP*G)-3'), triostin A
Authors:Wang, A.H.-J, Ughetto, G, Quigley, G.J, Hakoshima, T, Van Der Marel, G.A, Van Boom, J.H, Rich, A.
Deposit date:1988-08-18
Release date:2011-07-13
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.67 Å)
Cite:The molecular structure of a DNA-triostin A complex.
Science, 225, 1984
2ZUG
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Crystal structure of WSSV ICP11
Descriptor: ORF115 (WSSV285) (Wsv230)
Authors:Wang, A.H.-J, Wang, H.-C, Ko, T.-P, Lo, C.-F.
Deposit date:2008-10-17
Release date:2008-12-09
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.72 Å)
Cite:White spot syndrome virus protein ICP11: A histone-binding DNA mimic that disrupts nucleosome assembly
Proc.Natl.Acad.Sci.USA, 105, 2008
2D34
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FORMALDEHYDE CROSS-LINKS DAUNORUBICIN AND DNA EFFICIENTLY: HPLC AND X-RAY DIFFRACTION STUDIES
Descriptor: 5'-D(*CP*GP*TP*(A35)P*CP*G)-3', DAUNOMYCIN, MAGNESIUM ION
Authors:Wang, A.H.-J, Gao, Y.-G, Liaw, Y.-C, Li, Y.-K.
Deposit date:1991-05-23
Release date:1992-04-15
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Formaldehyde cross-links daunorubicin and DNA efficiently: HPLC and X-ray diffraction studies.
Biochemistry, 30, 1991
1VT6
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Molecular structure of the octamer D(G-G-C-C-G-G-C-C) modified A-DNA
Descriptor: DNA (5'-D(*GP*GP*CP*CP*GP*GP*CP*C)-3')
Authors:Wang, A.H.-J, Fujii, S, Van Boom, J.H, Rich, A.
Deposit date:1988-08-18
Release date:2011-07-13
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Molecular structure of the octamer d(G-G-C-C-G-G-C-C): modified A-DNA.
Proc.Natl.Acad.Sci.USA, 79, 1982
6JXG
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Crystasl Structure of Beta-glucosidase D2-BGL from Chaetomella Raphigera
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Beta-glucosidase, alpha-D-mannopyranose
Authors:Wang, A.H.-J, Lee, C.C, Kao, M.R, Ho, T.H.D.
Deposit date:2019-04-23
Release date:2019-11-20
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Chaetomella raphigerabeta-glucosidase D2-BGL has intriguing structural features and a high substrate affinity that renders it an efficient cellulase supplement for lignocellulosic biomass hydrolysis.
Biotechnol Biofuels, 12, 2019
1D11
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INTERACTIONS BETWEEN AN ANTHRACYCLINE ANTIBIOTIC AND DNA MOLECULAR STRUCTURE OF DAUNOMYCIN COMPLEXED TO D(CPGPTPAPCPG) AT 1.2-ANGSTROMS RESOLUTION
Descriptor: DAUNOMYCIN, DNA (5'-D(*CP*GP*TP*AP*CP*G)-3'), SODIUM ION
Authors:Wang, A.H.-J, Ughetto, G, Quigley, G.J, Rich, A.
Deposit date:1989-10-20
Release date:1990-10-15
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.18 Å)
Cite:Interactions between an anthracycline antibiotic and DNA: molecular structure of daunomycin complexed to d(CpGpTpApCpG) at 1.2-A resolution.
Biochemistry, 26, 1987
1D33
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Formaldehyde cross-links daunorubicin and DNA efficiently: HPLC and X-RAY diffraction studies
Descriptor: 5'-D(*CP*GP*CP*(G49)P*CP*G)-3', DAUNOMYCIN, MAGNESIUM ION
Authors:Wang, A.H.-J, Gao, Y.-G, Liaw, Y.-C, Li, Y.-K.
Deposit date:1991-02-27
Release date:1992-04-15
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Formaldehyde cross-links daunorubicin and DNA efficiently: HPLC and X-ray diffraction studies.
Biochemistry, 30, 1991
1VTC
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MOLECULAR STRUCTURE OF THE OCTAMER D(G-G-C-C-G-G-C-C) MODIFIED A-DNA
Descriptor: DNA (5'-D(*GP*GP*CP*CP*GP*GP*CP*C)-3')
Authors:Wang, A.H.-J, Fujii, S, Van Boom, J.H, Rich, A.
Deposit date:1988-08-18
Release date:2011-07-13
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Molecular Structure of the Octamer d(G-G-C-C-G-G-C-C) Modified A-DNA
Proc.Natl.Acad.Sci.USA, 79, 1982
1VTW
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AT Base Pairs Are Less Stable than GC Base Pairs in Z-DNA: The Crystal Structure of D(M(5)CGTAM(5)CG)
Descriptor: DNA (5'-D(*(CH3)CP*GP*TP*AP*(CH3)CP*G)-3')
Authors:Wang, A.H.-J, Hakoshima, T, Van Der Marel, G.A, Van Boom, J.H, Rich, A.
Deposit date:1988-08-18
Release date:2011-07-13
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:AT Base Pairs Are Less Stable than GC Base Pairs in Z-DNA: The Crystal Structure of d(m(5)CGTAm(5)CG)
Cell(Cambridge,Mass.), 37, 1984
1D96
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MOLECULAR STRUCTURE OF R(GCG)D(TATACGC): A DNA-RNA HYBRID HELIX JOINED TO DOUBLE HELICAL DNA
Descriptor: DNA/RNA (5'-R(*GP*CP*GP*)-D(*TP*AP*TP*AP*CP*GP*C)-3')
Authors:Wang, A.H.-J, Fujii, S, Van Boom, J.H, Van Der Marel, G.A, Van Boeckel, S.A.A, Rich, A.
Deposit date:1992-10-17
Release date:1993-07-15
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2 Å)
Cite:Molecular structure of r(GCG)d(TATACGC): a DNA--RNA hybrid helix joined to double helical DNA.
Nature, 299, 1982
8IKR
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Crystal structure of DpaA
Descriptor: YkuD domain-containing protein
Authors:Wang, H.-J, Hsieh, K.-Y, Lee, S.-H, Chang, C.-I.
Deposit date:2023-03-01
Release date:2023-10-11
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structural basis for the hydrolytic activity of the transpeptidase-like protein DpaA to detach Braun's lipoprotein from peptidoglycan.
Mbio, 14, 2023
3VK0
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Crystal Structure of hypothetical transcription factor NHTF from Neisseria
Descriptor: Transcriptional regulator
Authors:Wang, H.-C, Ko, T.-P, Wu, M.-L, Wu, H.-J, Ku, S.-C, Wang, A.H.-J.
Deposit date:2011-11-01
Release date:2012-03-14
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:Neisseria conserved protein DMP19 is a DNA mimic protein that prevents DNA binding to a hypothetical nitrogen-response transcription factor
Nucleic Acids Res., 2012
1WL3
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Crystal Structure Of Octaprenyl Pyrophosphate Synthase From Hyperthermophilic Thermotoga Maritima R91A mutant
Descriptor: octoprenyl-diphosphate synthase
Authors:Guo, R.T, Kuo, C.J, Cheng, Y.S, Cheng, Y.L, Liang, P.H, Wang, A.H.-J.
Deposit date:2004-06-18
Release date:2005-06-28
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Biochemical and Structural Basis for Octaprenyl Pyrophosphate Synthase
To be Published
1WKZ
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Crystal Structure Of Octaprenyl Pyrophosphate Synthase From Hyperthermophilic Thermotoga Maritima K41A mutant
Descriptor: SULFATE ION, octoprenyl-diphosphate synthase
Authors:Guo, R.T, Kuo, C.J, Cheng, Y.S, Cheng, Y.L, Liang, P.H, Wang, A.H.-J.
Deposit date:2004-06-18
Release date:2005-06-28
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Biochemical and Structural Basis for Octaprenyl Pyrophosphate Synthase
To be Published
1X09
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Crystal structure of the D26A mutant UPPs in complex with magnesium and isopentenyl pyrophosphate
Descriptor: 3-METHYLBUT-3-ENYL TRIHYDROGEN DIPHOSPHATE, MAGNESIUM ION, Undecaprenyl pyrophosphate synthetase
Authors:Guo, R.-T, Ko, T.-P, Chen, A.P.-C, Kuo, C.-J, Wang, A.H.-J, Liang, P.-H.
Deposit date:2005-03-15
Release date:2005-03-22
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:Crystal structures of undecaprenyl pyrophosphate synthase in complex with magnesium, isopentenyl pyrophosphate, and farnesyl thiopyrophosphate: roles of the metal ion and conserved residues in catalysis.
J.Biol.Chem., 280, 2005
1WD1
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Crystal structures of the hyperthermophilic chromosomal protein Sac7d in complex with DNA decamers
Descriptor: 5'-D(*CP*CP*TP*AP*CP*GP*TP*AP*GP*G)-3', DNA-binding proteins 7a/7b/7d
Authors:Ko, T.-P, Chu, H.-M, Chen, C.-Y, Chou, C.-C, Wang, A.H.-J.
Deposit date:2004-05-10
Release date:2004-08-03
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structures of the hyperthermophilic chromosomal protein Sac7d in complex with DNA decamers.
Acta Crystallogr.,Sect.D, 60, 2004
1X08
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Crystal structure of D26A mutant UPPs in complex with Mg, IPP and FsPP
Descriptor: 3-METHYLBUT-3-ENYL TRIHYDROGEN DIPHOSPHATE, S-[(2E,6E)-3,7,11-TRIMETHYLDODECA-2,6,10-TRIENYL] TRIHYDROGEN THIODIPHOSPHATE, Undecaprenyl pyrophosphate synthetase
Authors:Guo, R.-T, Ko, T.-P, Chen, A.P.-C, Kuo, C.-J, Wang, A.H.-J, Liang, P.-H.
Deposit date:2005-03-15
Release date:2005-03-22
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structures of undecaprenyl pyrophosphate synthase in complex with magnesium, isopentenyl pyrophosphate, and farnesyl thiopyrophosphate: roles of the metal ion and conserved residues in catalysis.
J.Biol.Chem., 280, 2005
1WM2
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Crystal structure of human SUMO-2 protein
Descriptor: Ubiquitin-like protein SMT3B
Authors:Huang, W.-C, Ko, T.-P, Li, S.S.-L, Wang, A.H.-J.
Deposit date:2004-07-02
Release date:2004-11-30
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structures of the human SUMO-2 protein at 1.6 A and 1.2 A resolution: implication on the functional differences of SUMO proteins
Eur.J.Biochem., 271, 2004
3LCW
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L-KDO aldolase complexed with hydroxypyruvate
Descriptor: 3-HYDROXYPYRUVIC ACID, N-acetylneuraminate lyase, SULFATE ION
Authors:Chou, C.-Y, Wang, A.H.-J, Ko, T.-P.
Deposit date:2010-01-12
Release date:2011-01-19
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Modulation of substrate specificities of D-sialic acid aldolase through single mutations of Val251
To be Published
1WTV
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Hyperthermophile chromosomal protein SAC7D single mutant M29A in complex with DNA GTAATTAC
Descriptor: 5'-D(*GP*TP*AP*AP*TP*TP*AP*C)-3', DNA-binding proteins 7a/7b/7d
Authors:Chen, C.-Y, Ko, T.-P, Lin, T.-W, Chou, C.-C, Chen, C.-J, Wang, A.H.-J.
Deposit date:2004-11-29
Release date:2005-02-22
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Probing the DNA kink structure induced by the hyperthermophilic chromosomal protein Sac7d
NUCLEIC ACIDS RES., 33, 2005
1WTW
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Hyperthermophile chromosomal protein SAC7D single mutant V26A in complex with DNA GCGATCGC
Descriptor: 5'-D(*GP*CP*GP*AP*TP*CP*GP*C)-3', DNA-binding proteins 7a/7b/7d
Authors:Chen, C.-Y, Ko, T.-P, Lin, T.-W, Chou, C.-C, Chen, C.-J, Wang, A.H.-J.
Deposit date:2004-11-29
Release date:2005-02-22
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Probing the DNA kink structure induced by the hyperthermophilic chromosomal protein Sac7d
NUCLEIC ACIDS RES., 33, 2005
1WTQ
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Hyperthermophile chromosomal protein SAC7D single mutant M29F in complex with DNA GTAATTAC
Descriptor: 5'-D(*GP*TP*AP*AP*TP*TP*AP*C)-3', DNA-binding proteins 7a/7b/7d
Authors:Chen, C.-Y, Ko, T.-P, Lin, T.-W, Chou, C.-C, Chen, C.-J, Wang, A.H.-J.
Deposit date:2004-11-29
Release date:2005-02-22
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Probing the DNA kink structure induced by the hyperthermophilic chromosomal protein Sac7d
NUCLEIC ACIDS RES., 33, 2005
3VJZ
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Crystal structure of the DNA mimic protein DMP19
Descriptor: Putative uncharacterized protein
Authors:Wang, H.-C, Ko, T.-P, Wang, A.H.-J.
Deposit date:2011-11-01
Release date:2012-03-14
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Neisseria conserved protein DMP19 is a DNA mimic protein that prevents DNA binding to a hypothetical nitrogen-response transcription factor
Nucleic Acids Res., 2012

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