Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 832 results

2OUL
DownloadVisualize
BU of 2oul by Molmil
The Structure of Chagasin in Complex with a Cysteine Protease Clarifies the Binding Mode and Evolution of a New Inhibitor Family
Descriptor: Chagasin, Falcipain 2
Authors:Wang, S.X, Chand, K, Huang, R, Whisstock, J, Jacobelli, J, Fletterick, R.J, Rosenthal, P.J, McKerrow, J.H.
Deposit date:2007-02-11
Release date:2008-02-26
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The structure of chagasin in complex with a cysteine protease clarifies the binding mode and evolution of an inhibitor family.
Structure, 15, 2007
4BVJ
DownloadVisualize
BU of 4bvj by Molmil
Structure of Y105A mutant of PhaZ7 PHB depolymerase
Descriptor: PHB DEPOLYMERASE PHAZ7, SODIUM ION
Authors:Hermawan, S, Subedi, B, Papageorgiou, A.C, Jendrossek, D.
Deposit date:2013-06-26
Release date:2013-09-18
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.599 Å)
Cite:Biochemical Analysis and Structure Determination of Paucimonas Lemoignei Poly(3-Hydroxybutyrate) (Phb) Depolymerase Phaz7 Muteins Reveal the Phb Binding Site and Details of Substrate-Enzyme Interactions.
Mol.Microbiol., 90, 2013
4BTV
DownloadVisualize
BU of 4btv by Molmil
Structure of PhaZ7 PHB depolymerase in complex with 3HB trimer
Descriptor: (1R)-3-{[(1R)-3-METHOXY-1-METHYL-3-OXOPROPYL]OXY}-1-METHYL-3-OXOPROPYL (3R)-3-HYDROXYBUTANOATE, PHB DEPOLYMERASE PHAZ7
Authors:Hermawan, S, Subedi, B, Papageorgiou, A.C, Jendrossek, D.
Deposit date:2013-06-19
Release date:2013-09-18
Last modified:2019-07-17
Method:X-RAY DIFFRACTION (1.594 Å)
Cite:Biochemical Analysis and Structure Determination of Paucimonas Lemoignei Poly(3-Hydroxybutyrate) (Phb) Depolymerase Phaz7 Muteins Reveal the Phb Binding Site and Details of Substrate-Enzyme Interactions.
Mol.Microbiol., 90, 2013
3T8V
DownloadVisualize
BU of 3t8v by Molmil
A bestatin-based chemical biology strategy reveals distinct roles for malaria M1- and M17-family aminopeptidases
Descriptor: M1 family aminopeptidase, MAGNESIUM ION, N-[(2-{2-[(N-{(2S,3R)-3-amino-4-[4-(benzyloxy)phenyl]-2-hydroxybutanoyl}-L-alanyl)amino]ethoxy}ethoxy)acetyl]-4-benzoyl-L-phenylalanyl-N~6~-hex-5-ynoyllysinamide, ...
Authors:McGowan, S, Klemba, M, Greebaum, D.C.
Deposit date:2011-08-01
Release date:2011-09-28
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Bestatin-based chemical biology strategy reveals distinct roles for malaria M1- and M17-family aminopeptidases
Proc.Natl.Acad.Sci.USA, 108, 2011
4BVK
DownloadVisualize
BU of 4bvk by Molmil
Structure of Y190E mutant of PhaZ7 PHB depolymerase
Descriptor: PHB DEPOLYMERASE PHAZ7
Authors:Hermawan, S, Subedi, B, Papageorgiou, A.C, Jendrossek, D.
Deposit date:2013-06-26
Release date:2013-09-18
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.606 Å)
Cite:Biochemical Analysis and Structure Determination of Paucimonas Lemoignei Poly(3-Hydroxybutyrate) (Phb) Depolymerase Phaz7 Muteins Reveal the Phb Binding Site and Details of Substrate-Enzyme Interactions.
Mol.Microbiol., 90, 2013
4BRS
DownloadVisualize
BU of 4brs by Molmil
Structure of wild type PhaZ7 PHB depolymerase
Descriptor: CHLORIDE ION, MAGNESIUM ION, PHB DEPOLYMERASE PHAZ7, ...
Authors:Hermawan, S, Subedi, B, Papageorgiou, A.C, Jendrossek, D.
Deposit date:2013-06-05
Release date:2013-09-18
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Biochemical Analysis and Structure Determination of Paucimonas Lemoignei Poly(3-Hydroxybutyrate) (Phb) Depolymerase Phaz7 Muteins Reveal the Phb Binding Site and Details of Substrate-Enzyme Interactions.
Mol.Microbiol., 90, 2013
4BVL
DownloadVisualize
BU of 4bvl by Molmil
Structure of 202-208 deletion mutant of PhaZ7 PHB depolymerase
Descriptor: PHB DEPOLYMERASE PHAZ7
Authors:Hermawan, S, Subedi, B, Papageorgiou, A.C, Jendrossek, D.
Deposit date:2013-06-26
Release date:2013-09-18
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.002 Å)
Cite:Biochemical Analysis and Structure Determination of Paucimonas Lemoignei Poly(3-Hydroxybutyrate) (Phb) Depolymerase Phaz7 Muteins Reveal the Phb Binding Site and Details of Substrate-Enzyme Interactions.
Mol.Microbiol., 90, 2013
1VD1
DownloadVisualize
BU of 1vd1 by Molmil
Crystal structure of RNase NT in complex with 5'-AMP
Descriptor: ADENOSINE MONOPHOSPHATE, RNase NGR3
Authors:Kawano, S, Kakuta, Y, Kimura, M.
Deposit date:2004-03-17
Release date:2005-04-26
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal Structure of the Nicotiana glutinosa Ribonuclease NT in Complex with Nucleotide Monophosphates
to be published
1VCZ
DownloadVisualize
BU of 1vcz by Molmil
Crystal structure of the RNase NT in complex with 5'-GMP
Descriptor: GUANOSINE-5'-MONOPHOSPHATE, RNase NGR3
Authors:Kawano, S, Kakuta, Y, Kimura, M.
Deposit date:2004-03-17
Release date:2005-04-26
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal Structure of the Nicotiana glutinosa Ribonuclease NT in Complex with Nucleotide Monophosphates
to be published
1VD3
DownloadVisualize
BU of 1vd3 by Molmil
Ribonuclease NT in complex with 2'-UMP
Descriptor: PHOSPHORIC ACID MONO-[2-(2,4-DIOXO-3,4-DIHYDRO-2H-PYRIMIDIN-1-YL)-4-HYDROXY-5-HYDROXYMETHYL-TETRAHYDRO-FURAN-3-YL] ESTER, RNase NGR3
Authors:Kawano, S, Kakuta, Y, Kimura, M.
Deposit date:2004-03-18
Release date:2005-04-26
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal Structure of the Nicotiana glutinosa Ribonuclease NT in Complex with Nucleotide Monophosphates
to be published
4BYM
DownloadVisualize
BU of 4bym by Molmil
Structure of PhaZ7 PHB depolymerase Y105E mutant
Descriptor: CHLORIDE ION, PHB DEPOLYMERASE PHAZ7, SODIUM ION
Authors:Hermawan, S, Subedi, B, Papageorgiou, A.C, Jendrossek, D.
Deposit date:2013-07-20
Release date:2013-09-18
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.598 Å)
Cite:Biochemical Analysis and Structure Determination of Paucimonas Lemoignei Poly(3-Hydroxybutyrate) (Phb) Depolymerase Phaz7 Muteins Reveal the Phb Binding Site and Details of Substrate-Enzyme Interactions.
Mol.Microbiol., 90, 2013
3W4Y
DownloadVisualize
BU of 3w4y by Molmil
Crystal structure of yeast Erv1 core
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, Mitochondrial FAD-linked sulfhydryl oxidase ERV1
Authors:Kawano, S, Terao, K, Watanabe, N, Endo, T.
Deposit date:2013-01-17
Release date:2013-03-20
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of yeast Erv1 core
To be published
1IYB
DownloadVisualize
BU of 1iyb by Molmil
Crystal Structure of the Nicotiana glutinosa Ribonuclease NW
Descriptor: GUANOSINE-5'-MONOPHOSPHATE, Ribonuclease
Authors:Kawano, S, Kakuta, Y, Kimura, M.
Deposit date:2002-08-05
Release date:2003-08-05
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Guanine binding site of the Nicotiana glutinosa ribonuclease NW revealed by X-ray crystallography
Biochemistry, 41, 2002
2CZV
DownloadVisualize
BU of 2czv by Molmil
Crystal structure of archeal RNase P protein ph1481p in complex with ph1877p
Descriptor: ACETIC ACID, Ribonuclease P protein component 2, Ribonuclease P protein component 3, ...
Authors:Kawano, S, Kakuta, Y, Nakashima, T, Tanaka, I, Kimura, M.
Deposit date:2005-07-19
Release date:2006-06-27
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of protein Ph1481p in complex with protein Ph1877p of archaeal RNase P from Pyrococcus horikoshii OT3: implication of dimer formation of the holoenzyme
J.Mol.Biol., 357, 2006
4K5P
DownloadVisualize
BU of 4k5p by Molmil
Phosphonic Arginine Mimetics as Inhibitors of the M1 Aminopeptidases from Plasmodium falciparum
Descriptor: GLYCEROL, M1 family aminopeptidase, MAGNESIUM ION, ...
Authors:McGowan, S.
Deposit date:2013-04-15
Release date:2013-06-12
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Synthesis and Structure-Activity Relationships of Phosphonic Arginine Mimetics as Inhibitors of the M1 and M17 Aminopeptidases from Plasmodium falciparum.
J.Med.Chem., 56, 2013
2MBB
DownloadVisualize
BU of 2mbb by Molmil
Solution Structure of the human Polymerase iota UBM1-Ubiquitin Complex
Descriptor: Immunoglobulin G-binding protein G/DNA polymerase iota fusion protein, Polyubiquitin-B
Authors:Wang, S, Zhou, P.
Deposit date:2013-07-29
Release date:2014-06-04
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Sparsely-sampled, high-resolution 4-D omit spectra for detection and assignment of intermolecular NOEs of protein complexes.
J.Biomol.Nmr, 59, 2014
4K5N
DownloadVisualize
BU of 4k5n by Molmil
Phosphonic Arginine Mimetics as Inhibitors of the M1 Aminopeptidases from Plasmodium falciparum
Descriptor: GLYCEROL, M1 family aminopeptidase, MAGNESIUM ION, ...
Authors:McGowan, S.
Deposit date:2013-04-15
Release date:2013-06-12
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:Synthesis and Structure-Activity Relationships of Phosphonic Arginine Mimetics as Inhibitors of the M1 and M17 Aminopeptidases from Plasmodium falciparum.
J.Med.Chem., 56, 2013
4K5M
DownloadVisualize
BU of 4k5m by Molmil
Phosphonic Arginine Mimetics as Inhibitors of the M1 Aminopeptidases from Plasmodium falciparum
Descriptor: GLYCEROL, M1 family aminopeptidase, MAGNESIUM ION, ...
Authors:McGowan, S.
Deposit date:2013-04-14
Release date:2013-06-12
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Synthesis and Structure-Activity Relationships of Phosphonic Arginine Mimetics as Inhibitors of the M1 and M17 Aminopeptidases from Plasmodium falciparum.
J.Med.Chem., 56, 2013
4K5L
DownloadVisualize
BU of 4k5l by Molmil
Phosphonic Arginine Mimetics as Inhibitors of the M1 Aminopeptidases from Plasmodium falciparum
Descriptor: M1 family aminopeptidase, MAGNESIUM ION, ZINC ION, ...
Authors:McGowan, S.
Deposit date:2013-04-14
Release date:2013-06-12
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:Synthesis and Structure-Activity Relationships of Phosphonic Arginine Mimetics as Inhibitors of the M1 and M17 Aminopeptidases from Plasmodium falciparum.
J.Med.Chem., 56, 2013
2MUR
DownloadVisualize
BU of 2mur by Molmil
Solution Structure of the Human FAAP20 UBZ-Ubiquitin Complex
Descriptor: Fanconi anemia-associated protein of 20 kDa, Ubiquitin, ZINC ION
Authors:Wang, S, Wojtaszek, J.L, Zhou, P.
Deposit date:2014-09-16
Release date:2014-12-03
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Ubiquitin recognition by FAAP20 expands the complex interface beyond the canonical UBZ domain.
Nucleic Acids Res., 42, 2014
4K5O
DownloadVisualize
BU of 4k5o by Molmil
Phosphonic Arginine Mimetics as Inhibitors of the M1 Aminopeptidases from Plasmodium falciparum
Descriptor: GLYCEROL, M1 family aminopeptidase, MAGNESIUM ION, ...
Authors:McGowan, S.
Deposit date:2013-04-15
Release date:2013-06-12
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Synthesis and Structure-Activity Relationships of Phosphonic Arginine Mimetics as Inhibitors of the M1 and M17 Aminopeptidases from Plasmodium falciparum.
J.Med.Chem., 56, 2013
1OPF
DownloadVisualize
BU of 1opf by Molmil
THE STRUCTURE OF OMPF PORIN IN A TETRAGONAL CRYSTAL FORM
Descriptor: MATRIX PORIN OUTER MEMBRANE PROTEIN F
Authors:Cowan, S.W, Schirmer, T, Pauptit, R.A, Jansonius, J.N.
Deposit date:1994-11-21
Release date:1995-02-07
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:The structure of OmpF porin in a tetragonal crystal form.
Structure, 3, 1995
2MAB
DownloadVisualize
BU of 2mab by Molmil
Untangling the Solution Structure of C-Terminal Domain of Aciniform Spidroin
Descriptor: ACINIFORM SPIDROIN
Authors:Wang, S, Yang, D.
Deposit date:2013-07-09
Release date:2014-03-05
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structure and function of C-terminal domain of aciniform spidroin
Biomacromolecules, 15, 2014
2LYI
DownloadVisualize
BU of 2lyi by Molmil
Repetitive domain (RP) of aciniform spidroin 1 from Nephila antipodiana
Descriptor: PROTEIN (entity)
Authors:Wang, S, Huang, W, Yang, D.
Deposit date:2012-09-18
Release date:2013-01-16
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:NMR structure note: repetitive domain of aciniform spidroin 1 from Nephila antipodiana
J.Biomol.Nmr, 54, 2012
2MM6
DownloadVisualize
BU of 2mm6 by Molmil
solution structure of alpha amylase inhibitor peptide aS1 from Allatide scholaris
Descriptor: Alpha amylase Alstotide S1
Authors:Wang, S, Nguyen, Q, Tam, J.
Deposit date:2014-03-10
Release date:2014-11-26
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Solution structure of alpha-amylase inhibitor peptide aS1 from Allatide scholaris
To be Published

224201

건을2024-08-28부터공개중

PDB statisticsPDBj update infoContact PDBjnumon