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PDB: 184 results

4N1M
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BU of 4n1m by Molmil
Structure of Cyclophilin A in complex with GlyPro.
Descriptor: GLYCINE, PROLINE, Peptidyl-prolyl cis-trans isomerase A
Authors:Mcnae, I.W, Patterson, A, Walkinshaw, M.D.
Deposit date:2013-10-04
Release date:2015-08-12
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:Mapping the binding surface of Cyclophilin A.
To be Published
4N1N
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BU of 4n1n by Molmil
Structure of Cyclophilin A in complex with Benzamide.
Descriptor: BENZAMIDE, Peptidyl-prolyl cis-trans isomerase A
Authors:Mcnae, I.W, Dornan, J, Walkinshaw, M.D.
Deposit date:2013-10-04
Release date:2015-08-12
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Mapping the binding surface of Cyclophilin A.
To be Published
4KRZ
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BU of 4krz by Molmil
Apo crystal structure of pyruvate kinase (PYK) from Trypanosoma cruzi
Descriptor: GLYCEROL, POTASSIUM ION, Pyruvate kinase
Authors:Zhong, W, Morgan, H.P, McNae, I.W, Michels, P.A.M, Fothergill-Gilmore, L.A, Walkinshaw, M.D.
Deposit date:2013-05-17
Release date:2014-11-19
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structures of pyruvate kinases display evolutionarily divergent allosteric strategies.
R Soc Open Sci, 1, 2014
4KS0
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BU of 4ks0 by Molmil
Pyruvate kinase (PYK) from Trypanosoma cruzi in the presence of Magnesium, oxalate and F26BP
Descriptor: 2,6-di-O-phosphono-beta-D-fructofuranose, MAGNESIUM ION, OXALATE ION, ...
Authors:Morgan, H.P, Zhong, W, McNae, I.W, Michels, P.A.M, Fothergill-Gilmore, L.A, Walkinshaw, M.D.
Deposit date:2013-05-17
Release date:2014-11-19
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structures of pyruvate kinases display evolutionarily divergent allosteric strategies.
R Soc Open Sci, 1, 2014
1KSS
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BU of 1kss by Molmil
Crystal Structure of His505Ala Mutant Flavocytochrome c3 from Shewanella frigidimarina
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, FUMARIC ACID, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Pankhurst, K.L, Mowat, C.G, Miles, C.S, Leys, D, Walkinshaw, M.D, Reid, G.A, Chapman, S.K.
Deposit date:2002-01-14
Release date:2002-08-14
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Role of His505 in the soluble fumarate reductase from Shewanella frigidimarina.
Biochemistry, 41, 2002
5NOR
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BU of 5nor by Molmil
Structure of cyclophilin A in complex with 3-methylpyridin-2-amine
Descriptor: 3-methylpyridin-2-amine, Peptidyl-prolyl cis-trans isomerase A
Authors:Georgiou, C, Mcnae, I.W, Ioannidis, H, Julien, M, Walkinshaw, M.D.
Deposit date:2017-04-13
Release date:2017-07-12
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Pushing the Limits of Detection of Weak Binding Using Fragment-Based Drug Discovery: Identification of New Cyclophilin Binders.
J. Mol. Biol., 429, 2017
5NOY
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BU of 5noy by Molmil
Structure of cyclophilin A in complex with 3,4-diaminobenzamide
Descriptor: 3,4-bis(azanyl)benzamide, Peptidyl-prolyl cis-trans isomerase A
Authors:Georgiou, C, Mcnae, I.W, Ioannidis, H, Julien, M, Walkinshaw, M.D.
Deposit date:2017-04-13
Release date:2017-07-12
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.43 Å)
Cite:Pushing the Limits of Detection of Weak Binding Using Fragment-Based Drug Discovery: Identification of New Cyclophilin Binders.
J. Mol. Biol., 429, 2017
3C2I
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BU of 3c2i by Molmil
The Crystal Structure of Methyl-CpG Binding Domain of Human MeCP2 in Complex with a Methylated DNA Sequence from BDNF
Descriptor: DNA (5'-D(*DAP*DTP*DAP*DGP*DAP*DAP*DGP*DAP*DAP*DTP*DTP*DCP*(5CM)P*DGP*DTP*DTP*DCP*DCP*DAP*DG)-3'), DNA (5'-D(*DTP*DCP*DTP*DGP*DGP*DAP*DAP*(5CM)P*DGP*DGP*DAP*DAP*DTP*DTP*DCP*DTP*DTP*DCP*DTP*DA)-3'), Methyl-CpG-binding protein 2
Authors:Ho, K.L, McNae, I.W, Schmiedeberg, L, Klose, R.J, Bird, A.P, Walkinshaw, M.D.
Deposit date:2008-01-25
Release date:2008-05-13
Last modified:2021-11-10
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:MeCP2 binding to DNA depends upon hydration at methyl-CpG
Mol.Cell, 29, 2008
5NOZ
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BU of 5noz by Molmil
Structure of cyclophilin A in complex with 3,4-diaminobenzohydrazide
Descriptor: 3,4-bis(azanyl)benzohydrazide, Peptidyl-prolyl cis-trans isomerase A
Authors:Georgiou, C, Mcnae, I.W, Ioannidis, H, Julien, M, Walkinshaw, M.D.
Deposit date:2017-04-13
Release date:2017-07-12
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.61 Å)
Cite:Pushing the Limits of Detection of Weak Binding Using Fragment-Based Drug Discovery: Identification of New Cyclophilin Binders.
J. Mol. Biol., 429, 2017
5NOT
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BU of 5not by Molmil
Structure of cyclophilin A in complex with 4-chloropyrimidin-5-amine
Descriptor: 4-chloranylpyrimidin-5-amine, Peptidyl-prolyl cis-trans isomerase A
Authors:Georgiou, C, Mcnae, I.W, Ioannidis, H, Julien, M, Walkinshaw, M.D.
Deposit date:2017-04-13
Release date:2017-07-12
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Pushing the Limits of Detection of Weak Binding Using Fragment-Based Drug Discovery: Identification of New Cyclophilin Binders.
J. Mol. Biol., 429, 2017
5NOX
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BU of 5nox by Molmil
Structure of cyclophilin A in complex with 2-chloropyridin-3-amine
Descriptor: 2-chloranylpyridin-3-amine, Peptidyl-prolyl cis-trans isomerase A
Authors:Georgiou, C, Mcnae, I.W, Ioannidis, H, Julien, M, Walkinshaw, M.D.
Deposit date:2017-04-13
Release date:2017-07-12
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.49 Å)
Cite:Pushing the Limits of Detection of Weak Binding Using Fragment-Based Drug Discovery: Identification of New Cyclophilin Binders.
J. Mol. Biol., 429, 2017
5NOQ
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BU of 5noq by Molmil
Structure of cyclophilin A in complex with 3-chloropyridin-2-amine
Descriptor: 3-chloranylpyridin-2-amine, Peptidyl-prolyl cis-trans isomerase A
Authors:Georgiou, C, Mcnae, I.W, Ioannidis, H, Julien, M, Walkinshaw, M.D.
Deposit date:2017-04-13
Release date:2017-07-12
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Pushing the Limits of Detection of Weak Binding Using Fragment-Based Drug Discovery: Identification of New Cyclophilin Binders.
J. Mol. Biol., 429, 2017
5NOU
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BU of 5nou by Molmil
Structure of cyclophilin A in complex with hexahydropyrimidin-2-one
Descriptor: 1,3-diazinan-2-one, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Peptidyl-prolyl cis-trans isomerase A
Authors:Georgiou, C, Mcnae, I.W, Ioannidis, H, Julien, M, Walkinshaw, M.D.
Deposit date:2017-04-13
Release date:2017-07-12
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Pushing the Limits of Detection of Weak Binding Using Fragment-Based Drug Discovery: Identification of New Cyclophilin Binders.
J. Mol. Biol., 429, 2017
5NOS
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BU of 5nos by Molmil
Structure of cyclophilin A in complex with 3-amino-1H-pyridin-2-one
Descriptor: 5-azanyl-3~{H}-pyridin-6-one, Peptidyl-prolyl cis-trans isomerase A
Authors:Georgiou, C, Mcnae, I.W, Ioannidis, H, Julien, M, Walkinshaw, M.D.
Deposit date:2017-04-13
Release date:2017-07-12
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Pushing the Limits of Detection of Weak Binding Using Fragment-Based Drug Discovery: Identification of New Cyclophilin Binders.
J. Mol. Biol., 429, 2017
5NOV
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BU of 5nov by Molmil
Structure of cyclophilin A in complex with hexahydropyrimidine-2-thione
Descriptor: 1,3-diazinane-2-thione, Peptidyl-prolyl cis-trans isomerase A
Authors:Georgiou, C, Mcnae, I.W, Ioannidis, H, Julien, M, Walkinshaw, M.D.
Deposit date:2017-04-13
Release date:2017-07-12
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2 Å)
Cite:Pushing the Limits of Detection of Weak Binding Using Fragment-Based Drug Discovery: Identification of New Cyclophilin Binders.
J. Mol. Biol., 429, 2017
2WJ9
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BU of 2wj9 by Molmil
ArdB
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, BETA-MERCAPTOETHANOL, CHLORIDE ION, ...
Authors:Weikart, N.D, Roberts, G, Johnson, K.A, Oke, M, Cooper, L.P, McMahon, S.A, White, J.H, Liu, H, Carter, L.G, Walkinshaw, M.D, Blakely, G.W, Naismith, J.H, Dryden, D.T.F.
Deposit date:2009-05-25
Release date:2010-08-18
Last modified:2018-05-02
Method:X-RAY DIFFRACTION (1.62 Å)
Cite:The Scottish Structural Proteomics Facility: Targets, Methods and Outputs.
J.Struct.Funct.Genomics, 11, 2010
3E0W
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BU of 3e0w by Molmil
Crystal structure of pyruvate kinase from Leishmania mexicana
Descriptor: Pyruvate kinase
Authors:Tulloch, L.B, Gillmore, L.A, Walkinshaw, M.D.
Deposit date:2008-08-01
Release date:2008-08-19
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Sulphate removal induces a major conformational change in Leishmania mexicana pyruvate kinase in the crystalline state.
J.Mol.Biol., 383, 2008
5NOW
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BU of 5now by Molmil
Structure of cyclophilin A in complex with pyridine-3,4-diamine
Descriptor: Peptidyl-prolyl cis-trans isomerase A, pyridine-3,4-diamine
Authors:Georgiou, C, Mcnae, I.W, Ioannidis, H, Julien, M, Walkinshaw, M.D.
Deposit date:2017-04-13
Release date:2017-07-12
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.48 Å)
Cite:Pushing the Limits of Detection of Weak Binding Using Fragment-Based Drug Discovery: Identification of New Cyclophilin Binders.
J. Mol. Biol., 429, 2017
1YIL
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BU of 1yil by Molmil
Structure of Hen egg white lysozyme soaked with Cu2-Xylylbicyclam
Descriptor: 1,1'-[1,4-PHENYLENEBIS(METHYLENE)]BIS[1,4,8,11-TETRAAZA-CYCLOTETRADECANE]CU(II)2, CHLORIDE ION, Lysozyme C, ...
Authors:Hunter, T.M, McNae, I.W, Liang, X, Bella, J, Parsons, S, Walkinshaw, M.D, Sadler, P.J.
Deposit date:2005-01-12
Release date:2005-02-08
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Protein recognition of macrocycles: binding of anti-HIV metallocyclams to lysozyme
Proc.Natl.Acad.Sci.Usa, 102, 2005
6GG5
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BU of 6gg5 by Molmil
Crystal structure of M2 PYK in complex with Tryptophan.
Descriptor: PHOSPHATE ION, POTASSIUM ION, Pyruvate kinase PKM, ...
Authors:McNae, I.W, Yuan, M, Walkinshaw, M.D.
Deposit date:2018-05-02
Release date:2018-05-23
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:An allostatic mechanism for M2 pyruvate kinase as an amino-acid sensor.
Biochem. J., 475, 2018
6GG6
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BU of 6gg6 by Molmil
Crystal structure of M2 PYK in complex with Serine.
Descriptor: MAGNESIUM ION, PHOSPHATE ION, POTASSIUM ION, ...
Authors:McNae, I.W, Yuan, M, Walkinshaw, M.D.
Deposit date:2018-05-02
Release date:2018-05-23
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.96 Å)
Cite:An allostatic mechanism for M2 pyruvate kinase as an amino-acid sensor.
Biochem. J., 475, 2018
6GG3
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BU of 6gg3 by Molmil
Crystal structure of M2 PYK in complex with Alanine.
Descriptor: ALANINE, PHOSPHATE ION, Pyruvate kinase PKM
Authors:McNae, I.W, Yuan, M, Walkinshaw, M.D.
Deposit date:2018-05-02
Release date:2019-09-04
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (3.72 Å)
Cite:An allostatic mechanism for M2 pyruvate kinase as an amino-acid sensor.
Biochem.J., 475, 2018
6GG4
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BU of 6gg4 by Molmil
Crystal structure of M2 PYK in complex with Phenyalanine.
Descriptor: PHENYLALANINE, PHOSPHATE ION, POTASSIUM ION, ...
Authors:McNae, I.W, Yuan, M, Walkinshaw, M.D.
Deposit date:2018-05-02
Release date:2018-05-23
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.46 Å)
Cite:An allostatic mechanism for M2 pyruvate kinase as an amino-acid sensor.
Biochem. J., 475, 2018
1CYN
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BU of 1cyn by Molmil
CYCLOPHILIN B COMPLEXED WITH [D-(CHOLINYLESTER)SER8]-CYCLOSPORIN
Descriptor: CYCLOSPORIN A, PEPTIDYL-PROLYL CIS-TRANS ISOMERASE B
Authors:Mikol, V, Kallen, J, Walkinshaw, M.D.
Deposit date:1995-05-22
Release date:1996-01-29
Last modified:2018-09-12
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:X-Ray Structure of a Cyclophilin B/Cyclosporin Complex: Comparison with Cyclophilin a and Delineation of its Calcineurin-Binding Domain.
Proc.Natl.Acad.Sci.USA, 91, 1994
5OFU
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BU of 5ofu by Molmil
Crystal structure of Leishmania major fructose-1,6-bisphosphatase in T-state.
Descriptor: 6-O-phosphono-beta-D-fructofuranose, ADENOSINE MONOPHOSPHATE, CHLORIDE ION, ...
Authors:Yuan, M, Vasquez-Valdivieso, M.G, McNae, I.W, Michels, P.A.M, Fothergill-Gilmore, L.A, Walkinshaw, M.D.
Deposit date:2017-07-11
Release date:2017-09-20
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.62 Å)
Cite:Structures of Leishmania Fructose-1,6-Bisphosphatase Reveal Species-Specific Differences in the Mechanism of Allosteric Inhibition.
J. Mol. Biol., 429, 2017

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