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PDB: 484 results

8PFG
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BU of 8pfg by Molmil
autoinhibited RfaH bound to E. coli transcription complex paused at ops site (encounter complex), not fully complementary scaffold
Descriptor: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ...
Authors:Zuber, P.K, Said, N, Hilal, T, Loll, B, Wahl, M.C, Knauer, S.H.
Deposit date:2023-06-15
Release date:2024-04-24
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Concerted transformation of a hyper-paused transcription complex and its reinforcing protein.
Nat Commun, 15, 2024
8PIB
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BU of 8pib by Molmil
autoinhibited RfaH bound to E. coli transcription complex paused at ops site (encounter complex)
Descriptor: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ...
Authors:Zuber, P.K, Said, N, Hilal, T, Loll, B, Wahl, M.C, Knauer, S.H.
Deposit date:2023-06-21
Release date:2024-04-24
Method:ELECTRON MICROSCOPY (2.6 Å)
Cite:Concerted transformation of a hyper-paused transcription complex and its reinforcing protein.
Nat Commun, 15, 2024
8PHK
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BU of 8phk by Molmil
fully recruited RfaH bound to E. coli transcription complex paused at ops site
Descriptor: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ...
Authors:Zuber, P.K, Said, N, Hilal, T, Loll, B, Wahl, M.C, Knauer, S.H.
Deposit date:2023-06-20
Release date:2024-04-24
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Concerted transformation of a hyper-paused transcription complex and its reinforcing protein.
Nat Commun, 15, 2024
4PSO
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BU of 4pso by Molmil
Crystal structure of apeThermo-DBP-RP2 bound to ssDNA dT10
Descriptor: PHOSPHATE ION, polydeoxyribonucleotide, ssDNA binding protein
Authors:Gahlei, H, von Moeller, H, Eppers, D, Loll, B, Wahl, M.C.
Deposit date:2014-03-07
Release date:2014-04-30
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Entrapment of DNA in an intersubunit tunnel system of a single-stranded DNA-binding protein.
Nucleic Acids Res., 42, 2014
4PSM
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BU of 4psm by Molmil
Crystal structure of pfuThermo-DBP-RP1 (crystal form II)
Descriptor: SULFATE ION, ssDNA binding protein
Authors:Gahlei, H, von Moeller, H, Eppers, D, Loll, B, Wahl, M.C.
Deposit date:2014-03-07
Release date:2014-04-30
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.43 Å)
Cite:Entrapment of DNA in an intersubunit tunnel system of a single-stranded DNA-binding protein.
Nucleic Acids Res., 42, 2014
4PSN
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BU of 4psn by Molmil
Crystal structure of apeThermo-DBP-RP2
Descriptor: GLYCEROL, IMIDAZOLE, ssDNA binding protein
Authors:Gahlei, H, von Moeller, H, Eppers, D, Loll, B, Wahl, M.C.
Deposit date:2014-03-07
Release date:2014-04-30
Last modified:2017-11-22
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Entrapment of DNA in an intersubunit tunnel system of a single-stranded DNA-binding protein.
Nucleic Acids Res., 42, 2014
4PSL
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BU of 4psl by Molmil
Crystal structure of pfuThermo-DBP-RP1 (crystal form I)
Descriptor: SULFATE ION, ssDNA binding protein
Authors:Gahlei, H, von Moeller, H, Eppers, D, Sohmen, D, Wilson, D.N, Loll, B, Wahl, M.C.
Deposit date:2014-03-07
Release date:2014-04-30
Last modified:2014-06-25
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Entrapment of DNA in an intersubunit tunnel system of a single-stranded DNA-binding protein.
Nucleic Acids Res., 42, 2014
4R3E
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BU of 4r3e by Molmil
Structure of the spliceosomal peptidyl-prolyl cis-trans isomerase Cwc27 from Homo sapiens
Descriptor: GLYCEROL, Peptidyl-prolyl cis-trans isomerase CWC27 homolog
Authors:Ulrich, A, Wahl, M.C.
Deposit date:2014-08-15
Release date:2014-11-19
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure and evolution of the spliceosomal peptidyl-prolyl cis-trans isomerase Cwc27.
Acta Crystallogr.,Sect.D, 70, 2014
4XHV
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BU of 4xhv by Molmil
Crystal structure of Drosophila Spinophilin-PDZ and a C-terminal peptide of Neurexin
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, LP20995p, ...
Authors:Driller, J.H, Muhammad, K.G.H, Reddy, S, Rey, U, Boehme, M.A, Hollmann, C, Ramesh, N, Depner, H, Luetzkendorf, J, Matkovic, T, Bergeron, D, Quentin, C, Schmoranzer, J, Goettfert, F, Holt, M, Wahl, M.C, Hell, S.W, Walter, A, Sigrist, S.J, Loll, B.
Deposit date:2015-01-06
Release date:2015-07-01
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.23 Å)
Cite:Presynaptic spinophilin tunes neurexin signalling to control active zone architecture and function.
Nat Commun, 6, 2015
4Y0Y
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BU of 4y0y by Molmil
Trypsin in complex with with BPTI
Descriptor: CALCIUM ION, Cationic trypsin, GLYCEROL, ...
Authors:Loll, B, Ye, S, Berger, A.A, Muelow, U, Alings, C, Wahl, M.C, Koksch, B.
Deposit date:2015-02-06
Release date:2015-06-24
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Fluorine teams up with water to restore inhibitor activity to mutant BPTI.
Chem Sci, 6, 2015
4Y0Z
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BU of 4y0z by Molmil
Trypsin in complex with with BPTI mutant AMINOBUTYRIC ACID
Descriptor: CALCIUM ION, Cationic trypsin, GLYCEROL, ...
Authors:Loll, B, Ye, S, Berger, A.A, Muelow, U, Alings, C, Wahl, M.C, Koksch, B.
Deposit date:2015-02-06
Release date:2015-06-24
Last modified:2018-04-18
Method:X-RAY DIFFRACTION (1.37 Å)
Cite:Fluorine teams up with water to restore inhibitor activity to mutant BPTI.
Chem Sci, 6, 2015
4Y10
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BU of 4y10 by Molmil
Trypsin in complex with with BPTI mutant (2S)-2-amino-4,4-difluorobutanoic acid
Descriptor: CALCIUM ION, Cationic trypsin, GLYCEROL, ...
Authors:Loll, B, Ye, S, Berger, A.A, Muelow, U, Alings, C, Wahl, M.C, Koksch, B.
Deposit date:2015-02-06
Release date:2015-06-24
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.37 Å)
Cite:Fluorine teams up with water to restore inhibitor activity to mutant BPTI.
Chem Sci, 6, 2015
4Y11
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BU of 4y11 by Molmil
Trypsin in complex with with BPTI mutant (2S)-2-amino-4,4,4-trifluorobutanoic acid
Descriptor: CALCIUM ION, Cationic trypsin, GLYCEROL, ...
Authors:Loll, B, Ye, S, Berger, A.A, Muelow, U, Alings, C, Wahl, M.C, Koksch, B.
Deposit date:2015-02-06
Release date:2015-06-24
Last modified:2018-04-18
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Fluorine teams up with water to restore inhibitor activity to mutant BPTI.
Chem Sci, 6, 2015
4YHV
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BU of 4yhv by Molmil
Yeast Prp3 C-terminal fragment 325-469
Descriptor: ACETIC ACID, U4/U6 small nuclear ribonucleoprotein PRP3
Authors:Liu, S, Wahl, M.C.
Deposit date:2015-02-27
Release date:2015-07-22
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2 Å)
Cite:A composite double-/single-stranded RNA-binding region in protein Prp3 supports tri-snRNP stability and splicing.
Elife, 4, 2015
4YHW
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BU of 4yhw by Molmil
Yeast Prp3 (296-469) in complex with fragment of U4/U6 di-snRNA
Descriptor: U4 snRNA fragment, U4/U6 small nuclear ribonucleoprotein PRP3, U6 snRNA fragment
Authors:Liu, S, Wahl, M.C.
Deposit date:2015-02-27
Release date:2015-07-22
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3.25 Å)
Cite:A composite double-/single-stranded RNA-binding region in protein Prp3 supports tri-snRNP stability and splicing.
Elife, 4, 2015
1ZAW
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BU of 1zaw by Molmil
Ribosomal Protein L10-L12(NTD) Complex, Space Group P212121, Form A
Descriptor: 50S ribosomal protein L10, 50S ribosomal protein L7/L12
Authors:Diaconu, M, Kothe, U, Schluenzen, F, Fischer, N, Harms, J.M, Tonevitski, A.G, Stark, H, Rodnina, M.V, Wahl, M.C.
Deposit date:2005-04-07
Release date:2005-07-12
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural Basis for the Function of the Ribosomal L7/12 Stalk in Factor Binding and GTPase Activation.
Cell(Cambridge,Mass.), 121, 2005
315D
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BU of 315d by Molmil
CRYSTAL STRUCTURE OF AN ALTERNATING OCTAMER R(GUAUGUA)D(C) WITH ADJACENT G-U WOBBLE PAIRS
Descriptor: DNA/RNA (5'-R(*GP*UP*AP*UP*GP*UP*AP*)-D(*C)-3')
Authors:Biswas, R, Wahl, M.C, Ban, C, Sundaralingam, M.
Deposit date:1997-02-26
Release date:1997-09-23
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.38 Å)
Cite:Crystal structure of an alternating octamer r(GUAUGUA)dC with adjacent G x U wobble pairs
J.Mol.Biol., 267, 1997
2A50
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BU of 2a50 by Molmil
fluorescent protein asFP595, wt, off-state
Descriptor: GFP-like non-fluorescent chromoprotein FP595 chain 1, GFP-like non-fluorescent chromoprotein FP595 chain 2
Authors:Andresen, M, Wahl, M.C, Stiel, A.C, Graeter, F, Schaefer, L, Trowitzsch, S, Weber, G, Eggeling, C, Grubmueller, H, Hell, S.W, Jakobs, S.
Deposit date:2005-06-30
Release date:2005-08-16
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Structure and mechanism of the reversible photoswitch of a fluorescent protein
Proc.Natl.Acad.Sci.Usa, 102, 2005
6Z9Q
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BU of 6z9q by Molmil
Transcription termination intermediate complex 2
Descriptor: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, DNA-directed RNA polymerase subunit alpha, ...
Authors:Said, N, Hilal, T, Loll, B, Wahl, M.C.
Deposit date:2020-06-04
Release date:2020-11-04
Last modified:2021-02-03
Method:ELECTRON MICROSCOPY (5.7 Å)
Cite:Steps toward translocation-independent RNA polymerase inactivation by terminator ATPase rho.
Science, 371, 2021
6Z9S
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BU of 6z9s by Molmil
Transcription termination intermediate complex 4
Descriptor: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, DNA-directed RNA polymerase subunit alpha, ...
Authors:Said, N, Hilal, T, Loll, B, Wahl, M.C.
Deposit date:2020-06-04
Release date:2020-11-04
Last modified:2021-02-03
Method:ELECTRON MICROSCOPY (4.4 Å)
Cite:Steps toward translocation-independent RNA polymerase inactivation by terminator ATPase rho.
Science, 371, 2021
6YXQ
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BU of 6yxq by Molmil
Crystal structure of a DNA repair complex ASCC3-ASCC2
Descriptor: Activating signal cointegrator 1 complex subunit 2, Activating signal cointegrator 1 complex subunit 3
Authors:Jia, J, Absmeier, E, Holton, N, Bohnsack, K.E, Pietrzyk-Brzezinska, A.J, Bohnsack, M.T, Wahl, M.C.
Deposit date:2020-05-03
Release date:2020-09-30
Last modified:2020-11-18
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:The interaction of DNA repair factors ASCC2 and ASCC3 is affected by somatic cancer mutations.
Nat Commun, 11, 2020
2AC3
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BU of 2ac3 by Molmil
Structure of human Mnk2 Kinase Domain
Descriptor: MAP kinase-interacting serine/threonine kinase 2, ZINC ION
Authors:Jauch, R, Wahl, M.C, Netter, C, Jakel, S, Schreiter, K, Aicher, B, Jackle, H.
Deposit date:2005-07-18
Release date:2005-10-04
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structures of the Mnk2 kinase domain reveal an inhibitory conformation and a zinc binding site.
Structure, 13, 2005
3BCB
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BU of 3bcb by Molmil
Crystal structure of mouse selenocysteine synthase, sodium phosphate soak
Descriptor: CHLORIDE ION, O-phosphoseryl-tRNA(Sec) selenium transferase, PHOSPHATE ION
Authors:Ganichkin, O.M, Wahl, M.C.
Deposit date:2007-11-12
Release date:2007-12-18
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structure and catalytic mechanism of eukaryotic selenocysteine synthase.
J.Biol.Chem., 283, 2008
2AC5
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BU of 2ac5 by Molmil
Structure of human Mnk2 Kinase Domain mutant D228G
Descriptor: MAP kinase-interacting serine/threonine kinase 2, ZINC ION
Authors:Jauch, R, Wahl, M.C, Jakel, S, Schreiter, K, Aicher, B, Jackle, H.
Deposit date:2005-07-18
Release date:2005-10-04
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Crystal structures of the Mnk2 kinase domain reveal an inhibitory conformation and a zinc binding site.
Structure, 13, 2005
2AEV
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BU of 2aev by Molmil
MJ0158, NaBH4-reduced form
Descriptor: Hypothetical protein MJ0158, SULFATE ION
Authors:Kaiser, J.T, Gromadski, K, Rother, M, Engelhardt, H, Rodnina, M.V, Wahl, M.C.
Deposit date:2005-07-24
Release date:2005-10-04
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural and functional investigation of a putative archaeal selenocysteine synthase
Biochemistry, 44, 2005

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