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PDB: 225 results

4WKV
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BU of 4wkv by Molmil
n-Alkylboronic Acid Inhibitors Reveal Determinants of Ligand Specificity in the Quorum-Quenching and Siderophore Biosynthetic Enzyme PvdQ
Descriptor: Acyl-homoserine lactone acylase PvdQ, GLYCEROL, trihydroxy(octyl)borate(1-)
Authors:Wu, R, Clevenger, K.D, Fast, W, Liu, D.
Deposit date:2014-10-03
Release date:2014-11-12
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.1434 Å)
Cite:n-Alkylboronic Acid Inhibitors Reveal Determinants of Ligand Specificity in the Quorum-Quenching and Siderophore Biosynthetic Enzyme PvdQ.
Biochemistry, 53, 2014
2P7J
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BU of 2p7j by Molmil
Crystal structure of the domain of putative sensory box/GGDEF family protein from Vibrio parahaemolyticus
Descriptor: ACETIC ACID, Putative sensory box/GGDEF family protein, SODIUM ION, ...
Authors:Wu, R, James, A, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2007-03-20
Release date:2007-05-01
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:The crystal structure of the domain of putative sensory box/GGDEF family protein from Vibrio parahaemolyticus
To be Published
4WKU
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BU of 4wku by Molmil
n-Alkylboronic Acid Inhibitors Reveal Determinants of Ligand Specificity in the Quorum-Quenching and Siderophore Biosynthetic Enzyme PvdQ
Descriptor: Acyl-homoserine lactone acylase PvdQ, GLYCEROL, hexyl(trihydroxy)borate(1-)
Authors:Wu, R, Clevenger, K.D, Fast, W, Liu, D.
Deposit date:2014-10-03
Release date:2014-11-12
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:n-Alkylboronic Acid Inhibitors Reveal Determinants of Ligand Specificity in the Quorum-Quenching and Siderophore Biosynthetic Enzyme PvdQ.
Biochemistry, 53, 2014
2PPW
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The crystal structure of uncharacterized Ribose 5-phosphate isomerase RpiB from Streptococcus pneumoniae
Descriptor: Conserved domain protein, SULFATE ION
Authors:Wu, R, Zhang, R, Abdullah, J, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2007-04-30
Release date:2007-06-12
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:The crystal structure of uncharacterized Ribose 5-phosphate isomerase RpiB from Streptococcus pneumoniae.
To be Published
4WKT
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BU of 4wkt by Molmil
n-Alkylboronic Acid Inhibitors Reveal Determinants of Ligand Specificity in the Quorum-Quenching and Siderophore Biosynthetic Enzyme PvdQ
Descriptor: 1-BUTANE BORONIC ACID, Acyl-homoserine lactone acylase PvdQ, GLYCEROL
Authors:Wu, R, Clevenger, K.D, Fast, W, Liu, D.
Deposit date:2014-10-03
Release date:2014-11-12
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.782 Å)
Cite:n-Alkylboronic Acid Inhibitors Reveal Determinants of Ligand Specificity in the Quorum-Quenching and Siderophore Biosynthetic Enzyme PvdQ.
Biochemistry, 53, 2014
2QSX
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BU of 2qsx by Molmil
Crystal structure of putative transcriptional regulator LysR From Vibrio parahaemolyticus
Descriptor: Putative transcriptional regulator, LysR family, SULFATE ION
Authors:Wu, R, Abdullah, J, Binkowski, T.A, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2007-07-31
Release date:2007-09-04
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.64 Å)
Cite:The Crystal Structure of Putative Transcriptional Regulator LysR From Vibrio parahaemolyticus.
To be Published
2R9I
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BU of 2r9i by Molmil
Crystal structure of putative phage capsid protein domain from Corynebacterium diphtheriae
Descriptor: Putative phage capsid protein
Authors:Wu, R, Abdullah, J, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2007-09-12
Release date:2007-12-18
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:The crystal structure of putative phage capsid protein domain from Corynebacterium diphtheriae.
To be Published
1LJ9
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BU of 1lj9 by Molmil
The crystal structure of the transcriptional regulator SlyA
Descriptor: transcriptional regulator SlyA
Authors:Wu, R.Y, Zhang, R.G, Gornicki, P, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2002-04-19
Release date:2003-01-21
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of Enterococcus faecalis SlyA-like transcriptional factor
J.Biol.Chem., 278, 2003
6VC6
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BU of 6vc6 by Molmil
2.1 Angstrom Resolution Crystal Structure of 6-phospho-alpha-glucosidase from Gut Microorganisms in Complex with NAD and Mn2+
Descriptor: 6-O-phosphono-alpha-D-glucopyranose, 6-phospho-alpha-glucosidase, GLYCEROL, ...
Authors:Wu, R, Kim, Y, Endres, M, Joachimiak, J.
Deposit date:2019-12-20
Release date:2020-12-23
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.133 Å)
Cite:2.1 Angstrom Resolution Crystal Structure of 6-phospho-alpha-glucosidase from Gut Microorganisms in Complex with NAD and Mn2+
To Be Published
2QW0
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BU of 2qw0 by Molmil
4-Chlorobenzoyl-CoA Ligase/Synthetase, I303A mutation, bound to 3,4 Dichlorobenzoate
Descriptor: 3,4-dichlorobenzoate, 4-Chlorobenzoate CoA Ligase
Authors:Wu, R, Reger, A.S, Cao, J, Gulick, A.M, Dunaway-Mariano, D.
Deposit date:2007-08-09
Release date:2007-12-18
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.56 Å)
Cite:Rational redesign of the 4-chlorobenzoate binding site of 4-chlorobenzoate: coenzyme a ligase for expanded substrate range.
Biochemistry, 46, 2007
2QVY
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4-Chlorobenzoyl-CoA Ligase/Synthetase, I303G mutation, bound to 3,4-Dichlorobenzoate
Descriptor: 3,4-dichlorobenzoate, 4-Chlorobenzoate CoA Ligase
Authors:Wu, R, Reger, A.S, Cao, J, Gulick, A.M, Dunaway-Mariano, D.
Deposit date:2007-08-09
Release date:2007-12-18
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.76 Å)
Cite:Rational redesign of the 4-chlorobenzoate binding site of 4-chlorobenzoate: coenzyme a ligase for expanded substrate range.
Biochemistry, 46, 2007
2QVX
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BU of 2qvx by Molmil
4-Chlorobenzoyl-CoA Ligase/Synthetase, I303G mutation, bound to 3-Chlorobenzoate
Descriptor: 3-chlorobenzoate, 4-Chlorobenzoate CoA Ligase
Authors:Wu, R, Reger, A.S, Cao, J, Gulick, A.M, Dunaway-Mariano, D.
Deposit date:2007-08-09
Release date:2007-12-18
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Rational redesign of the 4-chlorobenzoate binding site of 4-chlorobenzoate: coenzyme a ligase for expanded substrate range.
Biochemistry, 46, 2007
2QVZ
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BU of 2qvz by Molmil
4-Chlorobenzoyl-CoA Ligase/Synthetase, I303A mutation, bound to 3-Chlorobenzoate
Descriptor: 3-chlorobenzoate, 4-Chlorobenzoate CoA Ligase/Synthetase
Authors:Wu, R, Reger, A.S, Cao, J, Gulick, A.M, Dunaway-Mariano, D.
Deposit date:2007-08-09
Release date:2007-12-18
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Rational redesign of the 4-chlorobenzoate binding site of 4-chlorobenzoate: coenzyme a ligase for expanded substrate range.
Biochemistry, 46, 2007
1RLJ
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BU of 1rlj by Molmil
Structural Genomics, a Flavoprotein NrdI from Bacillus subtilis
Descriptor: FLAVIN MONONUCLEOTIDE, IODIDE ION, NrdI protein
Authors:Wu, R, Zhang, R, Collart, F, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2003-11-25
Release date:2004-07-13
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2 Å)
Cite:1.5A crystal structure of a thioredoxin-like protein NrdI from Bacillus subtilis
To be Published
1RZ2
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BU of 1rz2 by Molmil
1.6A crystal structure of the protein BA4783/Q81L49 (similar to sortase B) from Bacillus anthracis.
Descriptor: conserved hypothetical protein BA4783
Authors:Wu, R, Zhang, R, Gornicki, P, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2003-12-23
Release date:2004-07-06
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structures of sortase B from Staphylococcus aureus and Bacillus anthracis reveal catalytic amino acid triad in the active site.
Structure, 12, 2004
3CQB
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BU of 3cqb by Molmil
Crystal structure of heat shock protein HtpX domain from Vibrio parahaemolyticus RIMD 2210633
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, GLYCEROL, ...
Authors:Wu, R, Clancy, S, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2008-04-02
Release date:2008-05-27
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:The crystal structure of heat shock protein HtpX domain from Vibrio parahaemolyticus RIMD 2210633.
To be Published
3DLP
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BU of 3dlp by Molmil
4-Chlorobenzoyl-CoA Ligase/Synthetase, Mutant D402P, bound to 4CB
Descriptor: 4-CHLORO-BENZOIC ACID, 4-Chlorobenzoate CoA Ligase/Synthetase
Authors:Wu, R, Cao, J, Reger, A.S, Lu, X, Gulick, A.M, Dunaway-Mariano, D.
Deposit date:2008-06-28
Release date:2009-04-21
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:The mechanism of domain alternation in the acyl-adenylate forming ligase superfamily member 4-chlorobenzoate: coenzyme A ligase
Biochemistry, 48, 2009
8SPR
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BU of 8spr by Molmil
The cryo-EM structure of the EcBAM/EspP(beta1-12) complex
Descriptor: Outer membrane protein assembly factor BamA, Outer membrane protein assembly factor BamB, Outer membrane protein assembly factor BamC, ...
Authors:Wu, R, Noinaj, N.
Deposit date:2023-05-03
Release date:2024-05-08
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:BAM orchestrates OMP biogenesis using a beta-templating mechanism
To Be Published
8SQB
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BU of 8sqb by Molmil
The cryo-EM structure of the EcBAM/EspP(beta7-12) complex
Descriptor: Maltodextrin-binding protein,EspP(b7-12), Outer membrane protein assembly factor BamA, Outer membrane protein assembly factor BamB, ...
Authors:Wu, R, Noinaj, N.
Deposit date:2023-05-04
Release date:2024-05-08
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:BAM orchestrates OMP biogenesis using a beta-templating mechanism
To Be Published
8SQA
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BU of 8sqa by Molmil
The cryo-EM structure of the EcBAM/EspP(beta8-12) complex
Descriptor: Maltose/maltodextrin-binding periplasmic protein,Autotransporter protein EspP translocator, Outer membrane protein assembly factor BamA, Outer membrane protein assembly factor BamB, ...
Authors:Wu, R, Noinaj, N.
Deposit date:2023-05-04
Release date:2024-05-08
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:BAM orchestrates OMP biogenesis using a beta-templating mechanism
To Be Published
3H2Z
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BU of 3h2z by Molmil
The crystal structure of mannitol-1-phosphate dehydrogenase from Shigella flexneri
Descriptor: ACETATE ION, GLYCEROL, Mannitol-1-phosphate 5-dehydrogenase, ...
Authors:Wu, R, Clancy, S, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2009-04-15
Release date:2009-06-16
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The crystal structure of mannitol-1-phosphate dehydrogenase from Shigella flexneri
To be Published
3U27
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BU of 3u27 by Molmil
Crystal structure of ethanolamine utilization protein EutL from Leptotrichia buccalis C-1013-b
Descriptor: CALCIUM ION, GLYCEROL, Microcompartments protein, ...
Authors:Wu, R, Gu, M, Kerfeld, C.A, Salmeen, A, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2011-10-01
Release date:2012-02-08
Last modified:2020-01-29
Method:X-RAY DIFFRACTION (1.852 Å)
Cite:Crystal structure of ethanolamine utilization protein EutL from Leptotrichia buccalis C-1013-b
To be Published
2I5U
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BU of 2i5u by Molmil
Crystal structure of DnaD domain protein from Enterococcus faecalis. Structural genomics target APC85179
Descriptor: DnaD domain protein, MAGNESIUM ION
Authors:Wu, R, Zhang, R, Bargassa, M, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2006-08-25
Release date:2006-11-07
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:1.5 A crystal structure of a DnaD domain protein from Enterococcus Faecalis
To be Published, 2006
4EW7
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BU of 4ew7 by Molmil
The crystal structure of conjugative transfer PAS_like domain from Salmonella enterica subsp. enterica serovar Typhimurium
Descriptor: ACETIC ACID, CHLORIDE ION, Conjugative transfer: regulation, ...
Authors:Wu, R, Jedrzejczak, R.P, Brown, R.N, Cort, J.R, Heffron, F, Nakayasu, E.S, Adkins, J.N, Joachimiak, A, Midwest Center for Structural Genomics (MCSG), Program for the Characterization of Secreted Effector Proteins (PCSEP)
Deposit date:2012-04-26
Release date:2012-09-12
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.67 Å)
Cite:The crystal structure of conjugative transfer PAS_like domain from Salmonella enterica subsp. enterica serovar Typhimurium
To be Published
4WKS
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BU of 4wks by Molmil
n-Alkylboronic Acid Inhibitors Reveal Determinants of Ligand Specificity in the Quorum-Quenching and Siderophore Biosynthetic Enzyme PvdQ
Descriptor: Acyl-homoserine lactone acylase PvdQ, ethylboronic acid
Authors:Wu, R, Clevenger, D.K, Fast, W, Liu, D.
Deposit date:2014-10-03
Release date:2014-11-12
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.629 Å)
Cite:n-Alkylboronic Acid Inhibitors Reveal Determinants of Ligand Specificity in the Quorum-Quenching and Siderophore Biosynthetic Enzyme PvdQ.
Biochemistry, 53, 2014

219869

PDB entries from 2024-05-15

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