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PDB: 12895 results

1HQD
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PSEUDOMONAS CEPACIA LIPASE COMPLEXED WITH TRANSITION STATE ANALOGUE OF 1-PHENOXY-2-ACETOXY BUTANE
Descriptor: (RP,SP)-O-(2R)-(1-PHENOXYBUT-2-YL)-METHYLPHOSPHONIC ACID CHLORIDE, CALCIUM ION, LIPASE
Authors:Luic, M, Tomic, S, Lescic, I, Ljubovic, E, Sepac, D, Sunjic, V, Vitale, L, Saenger, W, Kojic-Prodic, B.
Deposit date:2000-12-15
Release date:2001-08-22
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Complex of Burkholderia cepacia lipase with transition state analogue of 1-phenoxy-2-acetoxybutane: biocatalytic, structural and modelling study.
Eur.J.Biochem., 268, 2001
6A1Z
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Crystal Structure of dimeric Kinesin-3 KIF13B
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Kinesin family member 13B, MAGNESIUM ION
Authors:Ren, J.Q, Wang, S, Feng, W.
Deposit date:2018-06-08
Release date:2018-11-21
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.58 Å)
Cite:Coiled-coil 1-mediated fastening of the neck and motor domains for kinesin-3 autoinhibition.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
1DFZ
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NMR STRUCTURE OF CONTRYPHAN-SM CYCLIC PEPTIDE (MINOR FORM-TRANS)
Descriptor: CONTRYPHAN-SM
Authors:Pallaghy, P.K, He, W, Jimenez, E.C, Olivera, B.M, Norton, R.S.
Deposit date:1999-11-22
Release date:2002-05-01
Last modified:2020-06-24
Method:SOLUTION NMR
Cite:Structures of the contryphan family of cyclic peptides. Role of electrostatic interactions in cis-trans isomerism.
Biochemistry, 39, 2000
6A2W
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Crystal structure of fucoxanthin chlorophyll a/c complex from Phaeodactylum tricornutum
Descriptor: (3S,3'R,5R,6S,7cis)-7',8'-didehydro-5,6-dihydro-5,6-epoxy-beta,beta-carotene-3,3'-diol, (3S,3'S,5R,5'R,6S,6'R,8'R)-3,5'-dihydroxy-8-oxo-6',7'-didehydro-5,5',6,6',7,8-hexahydro-5,6-epoxy-beta,beta-caroten-3'- yl acetate, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, ...
Authors:Wang, W, Yu, L.J, Kuang, T.Y, Shen, J.R.
Deposit date:2018-06-13
Release date:2019-02-06
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural basis for blue-green light harvesting and energy dissipation in diatoms.
Science, 363, 2019
1DBO
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CRYSTAL STRUCTURE OF CHONDROITINASE B
Descriptor: 4-deoxy-alpha-D-glucopyranose-(1-3)-[beta-D-glucopyranose-(1-4)]2-O-methyl-beta-L-fucopyranose-(1-4)-beta-D-xylopyranose-(1-4)-alpha-D-glucopyranuronic acid-(1-2)-[alpha-L-rhamnopyranose-(1-4)]alpha-D-mannopyranose, 4-deoxy-beta-D-glucopyranuronic acid-(1-3)-2-acetamido-2-deoxy-4-O-sulfo-beta-D-galactopyranose, CHONDROITINASE B
Authors:Huang, W, Matte, A, Li, Y, Kim, Y.S, Linhardt, R.J, Su, H, Cygler, M.
Deposit date:1999-11-03
Release date:2000-01-12
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of chondroitinase B from Flavobacterium heparinum and its complex with a disaccharide product at 1.7 A resolution.
J.Mol.Biol., 294, 1999
6A9S
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The crystal structure of vaccinia virus A26 (residues 1-397)
Descriptor: 1,2-ETHANEDIOL, Protein A26
Authors:Wang, H.C, Ko, T.Z, Luo, Y.C, Liao, Y.T, Chang, W.
Deposit date:2018-07-16
Release date:2019-06-12
Last modified:2019-07-10
Method:X-RAY DIFFRACTION (1.18 Å)
Cite:Vaccinia viral A26 protein is a fusion suppressor of mature virus and triggers membrane fusion through conformational change at low pH.
Plos Pathog., 15, 2019
1DBG
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BU of 1dbg by Molmil
CRYSTAL STRUCTURE OF CHONDROITINASE B
Descriptor: 4-deoxy-alpha-D-glucopyranose-(1-3)-[beta-D-glucopyranose-(1-4)]2-O-methyl-beta-L-fucopyranose-(1-4)-beta-D-xylopyranose-(1-4)-alpha-D-glucopyranuronic acid-(1-2)-[alpha-L-rhamnopyranose-(1-4)]alpha-D-mannopyranose, CHONDROITINASE B
Authors:Huang, W, Matte, A, Li, Y, Kim, Y.S, Linhardt, R.J, Su, H, Cygler, M.
Deposit date:1999-11-02
Release date:2000-01-12
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of chondroitinase B from Flavobacterium heparinum and its complex with a disaccharide product at 1.7 A resolution.
J.Mol.Biol., 294, 1999
1ICG
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STRUCTURE OF THE HYBRID RNA/DNA R-GCUUCGGC-D[F]U IN PRESENCE OF IR(NH3)6+++
Descriptor: 5'-R(*GP*CP*UP*UP*CP*GP*GP*C)-D(P*(UFP))-3', CHLORIDE ION, IRIDIUM HEXAMMINE ION
Authors:Cruse, W, Saludjian, P, Neuman, A, Prange, T.
Deposit date:2001-03-31
Release date:2001-04-09
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.53 Å)
Cite:Destabilizing effect of a fluorouracil extra base in a hybrid RNA duplex compared with bromo and chloro analogues.
Acta Crystallogr.,Sect.D, 57, 2001
1DF5
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INTERACTIONS BETWEEN HIV-1 GP41 CORE AND DETERGENTS AND THEIR IMPLICATIONS FOR MEMBRANE FUSION
Descriptor: HIV-1 ENVELOPE GLYCOPROTEIN GP41
Authors:Shu, W, Ji, H, Lu, M.
Deposit date:1999-11-17
Release date:1999-11-24
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Interactions between HIV-1 gp41 core and detergents and their implications for membrane fusion.
J.Biol.Chem., 275, 2000
1I1O
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ROOM TEMPERATURE CRYSTAL STRUCTURE FLAVODOXIN D. VULGARIS MUTANT Y98H AT 2.0 ANG. RESOLUTION
Descriptor: FLAVIN MONONUCLEOTIDE, FLAVODOXIN
Authors:Reynolds, R.A, Watt, W, Watenpaugh, K.D.
Deposit date:2001-02-02
Release date:2001-04-04
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structures and comparison of the Y98H (2.0 A) and Y98W (1.5 A) mutants of flavodoxin (Desulfovibrio vulgaris).
Acta Crystallogr.,Sect.D, 57, 2001
1I1S
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SOLUTION STRUCTURE OF THE TRANSCRIPTIONAL ACTIVATION DOMAIN OF THE BACTERIOPHAGE T4 PROTEIN MOTA
Descriptor: MOTA
Authors:Li, N, Zhang, W, White, S.W, Kriwacki, R.W.
Deposit date:2001-02-02
Release date:2001-02-14
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structure of the transcriptional activation domain of the bacteriophage T4 protein, MotA.
Biochemistry, 40, 2001
5ZZU
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Crystal structure of the C-terminal periplasmic domain of EcEptC from Escherichia coli- complex with Zn
Descriptor: Phosphoethanolamine transferase EptC, ZINC ION
Authors:Zhao, Y.Q, Cheng, W, Gu, Y.J.
Deposit date:2018-06-04
Release date:2019-06-05
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural and mechanistic insights into polymyxin resistance mediated by EptC originating from Escherichia coli
To Be Published
1DS3
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BU of 1ds3 by Molmil
CRYSTAL STRUCTURE OF OMTKY3-CH2-ASP19I
Descriptor: OVOMUCOID
Authors:Bateman, K.S, Huang, K, Anderson, S, Lu, W, Qasim, M.A, Laskowski Jr, M, James, M.N.G.
Deposit date:2000-01-06
Release date:2001-01-31
Last modified:2021-11-03
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Contribution of peptide bonds to inhibitor-protease binding: crystal structures of the turkey ovomucoid third domain backbone variants OMTKY3-Pro18I and OMTKY3-psi[COO]-Leu18I in complex with Streptomyces griseus proteinase B (SGPB) and the structure of the free inhibitor, OMTKY-3-psi[CH2NH2+]-Asp19I
J.Mol.Biol., 305, 2001
5ZVV
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BU of 5zvv by Molmil
Structure of SeMet-phAimR
Descriptor: AimR transcriptional regulator, GLYCEROL
Authors:Cheng, W, Dou, C.
Deposit date:2018-05-13
Release date:2018-09-05
Last modified:2019-03-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural and functional insights into the regulation of the lysis-lysogeny decision in viral communities.
Nat Microbiol, 3, 2018
3HF0
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BU of 3hf0 by Molmil
alpha/beta-Peptide helix crystallized from detergent solution: GCN4-pLI side chain sequence on an (alpha-alpha-beta-alpha-beta-alpha-beta) backbone with cyclic beta-residues
Descriptor: CETYL-TRIMETHYL-AMMONIUM, GCN4-pLI side chain sequence on an (alpha-alpha-beta-alpha-beta-alpha-beta) backbone with cyclic beta-residues
Authors:Horne, W.S, Price, J.L, Gellman, S.H.
Deposit date:2009-05-10
Release date:2009-05-19
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:alpha/beta-Peptide helix crystallized from detergent solution: GCN4-pLI side chain sequence on an (alpha-alpha-beta-alpha-beta-alpha-beta) backbone with cyclic beta-residues
To be Published
3HEZ
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BU of 3hez by Molmil
Exploring backbone pattern in alpha/beta-peptide helix bundles: The GCN4-pLI side chain sequence on different (alpha-alpha-alpha-beta) backbones
Descriptor: GLYCEROL, TERTIARY-BUTYL ALCOHOL, TRIS(HYDROXYETHYL)AMINOMETHANE, ...
Authors:Horne, W.S, Gellman, S.H.
Deposit date:2009-05-10
Release date:2009-05-19
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2 Å)
Cite:Exploring backbone pattern in GCN4-pLI alpha/beta-peptide helix bundles
To be Published
5ZW6
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BU of 5zw6 by Molmil
Structure of spAimR
Descriptor: AimR transcriptional regulator, GLY-MET-PRO-ARG-GLY-ALA
Authors:Cheng, W, Dou, C.
Deposit date:2018-05-14
Release date:2018-09-05
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structural and functional insights into the regulation of the lysis-lysogeny decision in viral communities.
Nat Microbiol, 3, 2018
1IW2
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BU of 1iw2 by Molmil
X-ray structure of Human Complement Protein C8gamma at pH=7.O
Descriptor: Complement Protein C8gamma
Authors:Ortlund, E, Parker, C.L, Schreck, S.F, Ginell, S, Minor, W, Sodetz, J.M, Lebioda, L.
Deposit date:2002-04-11
Release date:2002-06-12
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of human complement protein C8gamma at 1.2 A resolution reveals a lipocalin fold and a distinct ligand binding site.
Biochemistry, 41, 2002
1ENV
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BU of 1env by Molmil
ATOMIC STRUCTURE OF THE ECTODOMAIN FROM HIV-1 GP41
Descriptor: HIV-1 ENVELOPE PROTEIN CHIMERA CONSISTING OF A FRAGMENT OF GCN4 ZIPPER CLONED N-TERMINAL TO TWO FRAGMENTS OF GP41
Authors:Weissenhorn, W, Dessen, A, Harrison, S.C, Skehel, J.J, Wiley, D.C.
Deposit date:1997-06-27
Release date:1997-11-19
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Atomic structure of the ectodomain from HIV-1 gp41.
Nature, 387, 1997
6A5Q
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BU of 6a5q by Molmil
Structure of 14-3-3 beta in complex with TFEB 14-3-3 binding motif
Descriptor: 14-3-3 protein beta/alpha, MALONIC ACID, TFEB pS211-peptide
Authors:Xu, Y, Ren, J.Q, Feng, W.
Deposit date:2018-06-25
Release date:2019-02-13
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2 Å)
Cite:YWHA/14-3-3 proteins recognize phosphorylated TFEB by a noncanonical mode for controlling TFEB cytoplasmic localization.
Autophagy, 15, 2019
1EYR
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BU of 1eyr by Molmil
Structure of a sialic acid activating synthetase, CMP acylneuraminate synthetase in the presence and absence of CDP
Descriptor: CMP-N-ACETYLNEURAMINIC ACID SYNTHETASE, CYTIDINE-5'-DIPHOSPHATE
Authors:Mosimann, S.C, Gilbert, M, Dombrowski, D, Wakarchuk, W, Strynadka, N.C.
Deposit date:2000-05-08
Release date:2001-02-14
Last modified:2018-04-04
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure of a sialic acid-activating synthetase, CMP-acylneuraminate synthetase in the presence and absence of CDP.
J.Biol.Chem., 276, 2001
1J3I
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BU of 1j3i by Molmil
Wild-type Plasmodium falciparum dihydrofolate reductase-thymidylate synthase (PfDHFR-TS) complexed with WR99210, NADPH, and dUMP
Descriptor: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, 6,6-DIMETHYL-1-[3-(2,4,5-TRICHLOROPHENOXY)PROPOXY]-1,6-DIHYDRO-1,3,5-TRIAZINE-2,4-DIAMINE, Bifunctional dihydrofolate reductase-thymidylate synthase, ...
Authors:Yuvaniyama, J, Chitnumsub, P, Kamchonwongpaisan, S, Vanichtanankul, J, Sirawaraporn, W, Taylor, P, Walkinshaw, M, Yuthavong, Y.
Deposit date:2003-02-03
Release date:2003-05-06
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.33 Å)
Cite:Insights into antifolate resistance from malarial DHFR-TS structures.
NAT.STRUCT.BIOL., 10, 2003
1J77
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Crystal Structure of Gram-negative Bacterial Heme Oxygenase Complexed with Heme
Descriptor: HemO, PROTOPORPHYRIN IX CONTAINING FE
Authors:Schuller, D.J, Zhu, W, Stojiljkovic, I, Wilks, A, Poulos, T.L.
Deposit date:2001-05-15
Release date:2001-05-30
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal structure of heme oxygenase from the gram-negative pathogen Neisseria meningitidis and a comparison with mammalian heme oxygenase-1.
Biochemistry, 40, 2001
3HEY
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BU of 3hey by Molmil
Cyclic residues in alpha/beta-peptide helix bundles: GCN4-pLI side chain sequence on an (alpha-alpha-beta) backbone with cyclic beta-residues at positions 1, 4, 10, 19 and 28
Descriptor: ACETATE ION, alpha/beta-peptide based on the GCN4-pLI side chain sequence with an (alpha-alpha-beta) backbone and cyclic beta-residues at positions 1, 4, ...
Authors:Horne, W.S, Price, J.L, Gellman, S.H.
Deposit date:2009-05-10
Release date:2010-04-21
Last modified:2024-07-10
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural consequences of beta-amino acid preorganization in a self-assembling alpha/beta-peptide: fundamental studies of foldameric helix bundles.
J.Am.Chem.Soc., 132, 2010
6A6S
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Crystal structure of the modified fructosyl peptide oxidase from Aspergillus nidulans in complex with FSA, Seleno-methionine Derivative
Descriptor: (4S,5S)-1,2-DITHIANE-4,5-DIOL, 1-S-(carboxymethyl)-1-thio-beta-D-fructopyranose, FLAVIN-ADENINE DINUCLEOTIDE, ...
Authors:Ogawa, N, Maruyama, Y, Itoh, T, Hashimoto, W, Murata, K.
Deposit date:2018-06-29
Release date:2019-05-15
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.851 Å)
Cite:Creation of haemoglobin A1c direct oxidase from fructosyl peptide oxidase by combined structure-based site specific mutagenesis and random mutagenesis.
Sci Rep, 9, 2019

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數據於2024-07-10公開中

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