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PDB: 12920 results

1Z3W
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Structure of Phanerochaete chrysosporium cellobiohydrolase Cel7D (CBH58) in complex with cellobioimidazole
Descriptor: (5R,6R,7R,8S)-7,8-dihydroxy-5-(hydroxymethyl)-5,6,7,8-tetrahydroimidazo[1,2-a]pyridin-6-yl beta-D-glucopyranoside, 2-acetamido-2-deoxy-beta-D-glucopyranose, cellulase
Authors:Ubhayasekera, W, Vasella, A, Stahlberg, J, Mowbray, S.L.
Deposit date:2005-03-14
Release date:2005-04-26
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structures of Phanerochaete chrysosporium Cel7D in complex with product and inhibitors
Febs J., 272, 2005
4J4V
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Pentameric SFTSVN with suramin
Descriptor: 8,8'-[CARBONYLBIS[IMINO-3,1-PHENYLENECARBONYLIMINO(4-METHYL-3,1-PHENYLENE)CARBONYLIMINO]]BIS-1,3,5-NAPHTHALENETRISULFON IC ACID, Nucleocapsid protein
Authors:Jiao, L, Ouyang, S, Liang, M, Niu, F, Shaw, N, Wu, W, Ding, W, Jin, C, Zhu, Y, Zhang, F, Wang, T, Li, C, Zuo, X, Luan, C.H, Li, D, Liu, Z.J.
Deposit date:2013-02-07
Release date:2013-05-22
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.303 Å)
Cite:Structure of severe Fever with thrombocytopenia syndrome virus nucleocapsid protein in complex with suramin reveals therapeutic potential
J.Virol., 87, 2013
4QIH
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The structure of mycobacterial glucosyl-3-phosphoglycerate phosphatase Rv2419c complexes with VO3
Descriptor: Glucosyl-3-phosphoglycerate phosphatase, VANADATE ION
Authors:Zhou, W.H, Zheng, Q.Q, Jiang, D.Q, Zhang, W, Zhang, Q.Q, Jin, J, Li, X, Yang, H.T, Shaw, N, Rao, Z.
Deposit date:2014-05-30
Release date:2014-06-11
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.299 Å)
Cite:Mechanism of dephosphorylation of glucosyl-3-phosphoglycerate by a histidine phosphatase
J.Biol.Chem., 289, 2014
1Z3T
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Structure of Phanerochaete chrysosporium cellobiohydrolase Cel7D (CBH58) in complex with cellobiose
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, beta-D-glucopyranose-(1-4)-beta-D-glucopyranose, cellulase
Authors:Ubhayasekera, W, Stahlberg, J, Mowbray, S.L.
Deposit date:2005-03-14
Release date:2005-04-26
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structures of Phanerochaete chrysosporium Cel7D in complex with product and inhibitors
Febs J., 272, 2005
2OLP
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Structure and ligand selection of hemoglobin II from Lucina pectinata
Descriptor: Hemoglobin II, OXYGEN MOLECULE, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Gavira, J.A, Camara-Artigas, A, de Jesus, W, Lopez-Garriga, J, Garcia-Ruiz, J.M.
Deposit date:2007-01-19
Release date:2007-12-18
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.932 Å)
Cite:Structure and Ligand Selection of Hemoglobin II from Lucina pectinata
J.Biol.Chem., 283, 2008
4RVS
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BU of 4rvs by Molmil
The native structure of mycobacterial quinone oxidoreductase Rv154c.
Descriptor: Probable quinone reductase Qor (NADPH:quinone reductase) (Zeta-crystallin homolog protein)
Authors:Zhou, W.H, Zheng, Q.Q, Song, Y.L, Zhang, W, Shaw, N, Rao, Z.
Deposit date:2014-11-27
Release date:2015-06-24
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.8464 Å)
Cite:Structural views of quinone oxidoreductase from Mycobacterium tuberculosis reveal large conformational changes induced by the co-factor.
Febs J., 282, 2015
4J4X
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Crystal structure of GraVN
Descriptor: NP protein
Authors:Jiao, L, Ouyang, S, Liang, M, Niu, F, Shaw, N, Wu, W, Ding, W, Jin, C, Zhu, Y, Zhang, F, Wang, T, Li, C, Zuo, X, Luan, C.H, Li, D, Liu, Z.J.
Deposit date:2013-02-07
Release date:2013-05-22
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.51 Å)
Cite:Structure of severe Fever with thrombocytopenia syndrome virus nucleocapsid protein in complex with suramin reveals therapeutic potential
J.Virol., 87, 2013
4ISW
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Crystal Structure of Phosphorylated C.elegans Thymidylate Synthase in Complex with dUMP
Descriptor: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, Thymidylate synthase
Authors:Wilk, P, Dowiercial, A, Banaszak, K, Jarmula, A, Rypniewski, W, Rode, W.
Deposit date:2013-01-17
Release date:2013-12-11
Last modified:2014-01-15
Method:X-RAY DIFFRACTION (3.14 Å)
Cite:Crystal structure of phosphoramide-phosphorylated thymidylate synthase reveals pSer127, reflecting probably pHis to pSer phosphotransfer.
Bioorg.Chem., 52C, 2013
1ZEA
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Structure of the anti-cholera toxin antibody Fab fragment TE33 in complex with a D-peptide
Descriptor: CITRIC ACID, monoclonal anti-cholera toxin IGG1 KAPPA antibody, H chain, ...
Authors:Scheerer, P, Krauss, N, Wessner, H, Scholz, C, Otte, L, Seifert, M, Kramer, A, Schneider-Mergener, J, Hoehne, W.
Deposit date:2005-04-18
Release date:2006-04-04
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Structure of an anti-cholera toxin antibody Fab in complex with an epitope-derived D-peptide: a case of polyspecific recognition.
J.Mol.Recognit., 20, 2007
4IW7
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Crystal structure of 8-amino-7-oxononanoate synthase (bioF) from Francisella tularensis.
Descriptor: 8-amino-7-oxononanoate synthase
Authors:Newcomb, W, Niedzialkowska, E, Porebski, P.J, Grimshaw, S, Anderson, W.F, Minor, W, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2013-01-23
Release date:2013-02-13
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Crystal structure of 8-amino-7-oxononanoate synthase (bioF) from Francisella tularensis.
To be Published
4IXU
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BU of 4ixu by Molmil
Crystal structure of human Arginase-2 complexed with inhibitor 11d: {(5R)-5-amino-5-carboxy-5-[(3-endo)-8-(3,4-dichlorobenzyl)-8-azabicyclo[3.2.1]oct-3-yl]pentyl}(trihydroxy)borate(1-)
Descriptor: Arginase-2, mitochondrial, BENZAMIDINE, ...
Authors:Cousido-Siah, A, Mitschler, A, Ruiz, F.X, Whitehouse, D, Beckett, P, Van Zandt, M.C, Ji, M.K, Ryder, T, Jagdmann, R, Andreoli, M, Olczak, J, Mazur, M, Czestkowski, W, Piotrowska, W, Schroeter, H, Golebiowski, A, Podjarny, A.
Deposit date:2013-01-28
Release date:2013-12-11
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Synthesis of quaternary alpha-amino acid-based arginase inhibitors via the Ugi reaction.
Bioorg.Med.Chem.Lett., 23, 2013
4J4W
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Crystal structure of BueVN
Descriptor: Nucleocapsid
Authors:Jiao, L, Ouyang, S, Liang, M, Niu, F, Shaw, N, Wu, W, Ding, W, Jin, C, Zhu, Y, Zhang, F, Wang, T, Li, C, Zuo, X, Luan, C.H, Li, D, Liu, Z.J.
Deposit date:2013-02-07
Release date:2013-05-22
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.661 Å)
Cite:Structure of severe Fever with thrombocytopenia syndrome virus nucleocapsid protein in complex with suramin reveals therapeutic potential
J.Virol., 87, 2013
1TRQ
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BU of 1trq by Molmil
X-RAY CRYSTALLOGRAPHIC AND CALORIMERIC STUDIES OF THE EFFECTS OF THE MUTATION TRP 59 TYR IN RIBONUCLEASE T1
Descriptor: CALCIUM ION, GUANOSINE-2'-MONOPHOSPHATE, RIBONUCLEASE T1 ISOZYME
Authors:Schubert, W.-D, Saenger, W.
Deposit date:1993-07-06
Release date:1994-04-30
Last modified:2017-11-29
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:X-ray crystallographic and calorimetric studies of the effects of the mutation Trp59-->Tyr in ribonuclease T1.
Eur.J.Biochem., 220, 1994
5ROB
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BU of 5rob by Molmil
PanDDA analysis group deposition of ground-state model of SARS-CoV-2 helicase
Descriptor: Helicase, PHOSPHATE ION, ZINC ION
Authors:Newman, J.A, Yosaatmadja, Y, Douangamath, A, Aimon, A, Powell, A.J, Dias, A, Fearon, D, Dunnett, L, Brandao-Neto, J, Krojer, T, Skyner, R, Gorrie-Stone, T, Thompson, W, von Delft, F, Arrowsmith, C.H, Edwards, A, Bountra, C, Gileadi, O.
Deposit date:2020-09-22
Release date:2021-03-10
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:PanDDA analysis group deposition of ground-state model
To Be Published
4EB4
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BU of 4eb4 by Molmil
Crystal structure of mouse thymidylate synthase in ternary complex with dUMP and Tomudex
Descriptor: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, 2,3-DIHYDROXY-1,4-DITHIOBUTANE, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, ...
Authors:Dowiercial, A, Jarmula, A, Rypniewski, W.R, Wilk, P, Rode, W.
Deposit date:2012-03-23
Release date:2012-05-02
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:Crystal structure of mouse thymidylate synthase in tertiary complex with dUMP and raltitrexed reveals N-terminus architecture and two different active site conformations.
Biomed Res Int, 2014, 2014
4EJS
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BU of 4ejs by Molmil
Structure of yeast elongator subcomplex Elp456
Descriptor: Elongator complex protein 4, Elongator complex protein 5, Elongator complex protein 6
Authors:Lin, Z, Zhao, W, Long, J, Shen, Y.
Deposit date:2012-04-07
Release date:2012-05-02
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.606 Å)
Cite:Crystal structure of elongator subcomplex Elp4-6
J.Biol.Chem., 287, 2012
5S73
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BU of 5s73 by Molmil
PanDDA analysis group deposition of ground-state model of SARS-CoV-2 Nsp3 macrodomain
Descriptor: Non-structural protein 3
Authors:Fearon, D, Schuller, M, Rangel, V.L, Douangamath, A, Rack, J.G.M, Zhu, K, Aimon, A, Brandao-Neto, J, Dias, A, Dunnet, L, Gorrie-Stone, T.J, Powell, A.J, Krojer, T, Skyner, R, Thompson, W, Ahel, I, von Delft, F.
Deposit date:2020-11-23
Release date:2021-01-13
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.06 Å)
Cite:PanDDA analysis group deposition of ground-state model of SARS-CoV-2 Nsp3 macrodomain
To Be Published
5S74
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PanDDA analysis group deposition of ground-state model of SARS-CoV-2 Nsp3 macrodomain
Descriptor: 1,2-ETHANEDIOL, Non-structural protein 3
Authors:Fearon, D, Schuller, M, Rangel, V.L, Douangamath, A, Rack, J.G.M, Zhu, K, Aimon, A, Brandao-Neto, J, Dias, A, Dunnet, L, Gorrie-Stone, T.J, Powell, A.J, Krojer, T, Skyner, R, Thompson, W, Ahel, I, von Delft, F.
Deposit date:2020-11-23
Release date:2021-01-13
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (0.96 Å)
Cite:PanDDA analysis group deposition of ground-state model of SARS-CoV-2 Nsp3 macrodomain
To Be Published
1TRP
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BU of 1trp by Molmil
X-RAY CRYSTALLOGRAPHIC AND CALORIMERIC STUDIES OF THE EFFECTS OF THE MUTATION TRP 59 TYR IN RIBONUCLEASE T1
Descriptor: CALCIUM ION, GUANOSINE-2'-MONOPHOSPHATE, RIBONUCLEASE T1 ISOZYME
Authors:Schluckebier, G, Saenger, W.
Deposit date:1993-07-06
Release date:1994-04-30
Last modified:2017-11-29
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:X-ray crystallographic and calorimetric studies of the effects of the mutation Trp59-->Tyr in ribonuclease T1.
Eur.J.Biochem., 220, 1994
1OVO
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BU of 1ovo by Molmil
CRYSTALLOGRAPHIC REFINEMENT OF JAPANESE QUAIL OVOMUCOID, A KAZAL-TYPE INHIBITOR, AND MODEL BUILDING STUDIES OF COMPLEXES WITH SERINE PROTEASES
Descriptor: OVOMUCOID THIRD DOMAIN
Authors:Weber, E, Papamokos, E, Bode, W, Huber, R, Kato, I, Laskowskijunior, M.
Deposit date:1982-01-18
Release date:1982-05-26
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystallographic refinement of Japanese quail ovomucoid, a Kazal-type inhibitor, and model building studies of complexes with serine proteases.
J.Mol.Biol., 158, 1982
2E2A
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BU of 2e2a by Molmil
ASP81LEU ENZYME IIA FROM THE LACTOSE SPECIFIC PTS FROM LACTOCOCCUS LACTIS
Descriptor: PROTEIN (ENZYME IIA)
Authors:Sliz, P, Koch, B, Hengstenberg, W, Pai, E.F.
Deposit date:1999-05-14
Release date:2003-06-17
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure of Asp81Leu Enzyme Iia from the Lactose Specific Pts from Lactococcus Lactis
To be Published
2OZE
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BU of 2oze by Molmil
The Crystal structure of Delta protein of pSM19035 from Streptoccocus pyogenes
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, MAGNESIUM ION, Orf delta', ...
Authors:Cicek, A, Weihofen, W, Saenger, W.
Deposit date:2007-02-26
Release date:2008-03-11
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:Streptococcus pyogenes pSM19035 requires dynamic assembly of ATP-bound ParA and ParB on parS DNA during plasmid segregation.
Nucleic Acids Res., 36, 2008
6OCV
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Solution structure of the H-NOX protein from Shewanella woodyi in the Fe(II)CO ligation state
Descriptor: CARBON MONOXIDE, Heme NO binding domain protein, PROTOPORPHYRIN IX CONTAINING FE
Authors:Chen, C.Y, Lee, W, Montfort, W.R.
Deposit date:2019-03-25
Release date:2020-05-06
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Solution structures of the Shewanella woodyi H-NOX protein in the presence and absence of soluble guanylyl cyclase stimulator IWP-051.
Protein Sci., 30, 2021
6OEQ
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BU of 6oeq by Molmil
Cryo-EM structure of mouse RAG1/2 12RSS-PRC/23RSS-NFC complex (DNA1)
Descriptor: CALCIUM ION, DNA (46-MER), DNA (57-MER), ...
Authors:Chen, X, Cui, Y, Zhou, Z.H, Yang, W, Gellert, M.
Deposit date:2019-03-27
Release date:2020-01-29
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (4.3 Å)
Cite:Cutting antiparallel DNA strands in a single active site.
Nat.Struct.Mol.Biol., 27, 2020
6U8U
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RNA duplex bound with TNA 3'-3' imidazolium dimer
Descriptor: 2-amino-3-[(R)-{[(3S,4R,5R)-5-(2-amino-6-oxo-1,6-dihydro-9H-purin-9-yl)-4-hydroxyoxolan-3-yl]oxy}(hydroxy)phosphoryl]-1-[(S)-{[(3S,4R,5R)-5-(2-amino-6-oxo-1,6-dihydro-9H-purin-9-yl)-4-hydroxyoxolan-3-yl]oxy}(hydroxy)phosphoryl]-1H-imidazol-3-ium, MAGNESIUM ION, RNA (5'-R(*(LCC)P*(LCC)P*(LCC)P*(LCG)P*AP*CP*UP*UP*AP*AP*GP*UP*CP*G)-3')
Authors:Szostak, J.W, Zhang, W.
Deposit date:2019-09-05
Release date:2020-12-09
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural interpretation of the effects of threo-nucleotides on nonenzymatic template-directed polymerization.
Nucleic Acids Res., 49, 2021

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數據於2024-07-31公開中

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