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PDB: 12988 件

6IOA
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The structure of UdgX in complex with uracil
分子名称: IRON/SULFUR CLUSTER, Phage SPO1 DNA polymerase-related protein, SULFATE ION, ...
著者Xie, W, Tu, J.
登録日2018-10-29
公開日2019-07-24
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Suicide inactivation of the uracil DNA glycosylase UdgX by covalent complex formation.
Nat.Chem.Biol., 15, 2019
1PPG
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BU of 1ppg by Molmil
The refined 2.3 angstroms crystal structure of human leukocyte elastase in a complex with a valine chloromethyl ketone inhibitor
分子名称: HUMAN LEUKOCYTE ELASTASE, MEO-SUCCINYL-ALA-ALA-PRO-VAL CHLOROMETHYLKETONE, alpha-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-alpha-D-glucopyranose-(1-2)-beta-D-mannopyranose-(1-6)-[alpha-D-mannopyranose-(1-3)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Bode, W, Wei, A-Z.
登録日1991-10-24
公開日1994-01-31
最終更新日2024-07-10
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献The refined 2.3 A crystal structure of human leukocyte elastase in a complex with a valine chloromethyl ketone inhibitor.
FEBS Lett., 234, 1988
2CIX
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chloroperoxidase complexed with cyclopentanedione
分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Kuhnel, K, Blankenfeldt, W, Terner, J, Schlichting, I.
登録日2006-03-26
公開日2006-06-12
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal Structures of Chloroperoxidase with its Bound Substrates and Complexed with Formate, Acetate, and Nitrate.
J.Biol.Chem., 281, 2006
2CBN
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Crystal structure of ZipD from Escherichia coli
分子名称: RIBONUCLEASE Z, ZINC ION
著者Pohl, E, Meyer-Klaucke, W, Kostelecky, B.
登録日2006-01-06
公開日2006-02-15
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献The Crystal Structure of the Zinc Phosphodiesterase from Escherichia Coli Provides Insight Into Function and Cooperativity of Trnase Z-Family Proteins.
J.Bacteriol., 188, 2006
3AY2
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Crystal structure of Neisserial azurin
分子名称: GLYCEROL, Lipid modified azurin protein, SULFATE ION, ...
著者Ochiai, A, Hashimoto, W, Yamada, T, Chakrabarty, A.M, Murata, K.
登録日2011-04-24
公開日2012-05-02
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of Neisserial Azurin
To be Published
2CEF
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Phosphorylation of the Cytoplasmic Tail of Tissue Factor and its Role in Modulating Structure and Binding Affinity.
分子名称: TISSUE FACTOR
著者Sen, M, Agrawal, S, Craft, J.W, Ruf, W, Legge, G.B.
登録日2006-02-06
公開日2007-02-13
最終更新日2019-10-02
実験手法SOLUTION NMR
主引用文献Spectroscopic Characterization of Successive Phosphorylation of the Tissue Factor Cytoplasmic Region.
Open Spectrosc.J., 3, 2009
2CH6
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BU of 2ch6 by Molmil
Crystal structure of human N-acetylglucosamine kinase in complex with ADP and glucose
分子名称: ADENOSINE-5'-DIPHOSPHATE, N-ACETYL-D-GLUCOSAMINE KINASE, alpha-D-glucopyranose
著者Weihofen, W.A, Berger, M, Chen, H, Saenger, W, Hinderlich, S.
登録日2006-03-13
公開日2006-09-18
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.72 Å)
主引用文献Structures of Human N-Acetylglucosamine Kinase in Two Complexes with N-Acetylglucosamine and with Adp/Glucose: Insights Into Substrate Specificity and Regulation.
J.Mol.Biol., 364, 2006
3B38
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Structure of A104V DJ-1
分子名称: 1,2-ETHANEDIOL, Protein DJ-1
著者Lakshminarasimhan, M, Maldonado, M.T, Zhou, W, Fink, A.L, Wilson, M.A.
登録日2007-10-19
公開日2008-01-15
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Structural Impact of Three Parkinsonism-Associated Missense Mutations on Human DJ-1.
Biochemistry, 47, 2008
3NCR
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GlnK2 from Archaeoglubus fulgidus, ADP complex
分子名称: ACETATE ION, ADENOSINE-5'-DIPHOSPHATE, CHLORIDE ION, ...
著者Helfmann, S, Lue, W, Litz, C, Andrade, S.L.A.
登録日2010-06-05
公開日2010-07-28
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.44 Å)
主引用文献Cooperative binding of MgATP and MgADP in the trimeric P(II) protein GlnK2 from Archaeoglobus fulgidus.
J.Mol.Biol., 402, 2010
3B6V
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Crystal structure of the motor domain of human kinesin family member 3C in complex with ADP
分子名称: ADENOSINE-5'-DIPHOSPHATE, Kinesin-like protein KIF3C, MAGNESIUM ION, ...
著者Zhu, H, Tempel, W, Shen, Y, Landry, R, Arrowsmith, C.H, Edwards, A.M, Sundstrom, M, Weigelt, J, Bochkarev, A, Park, H, Structural Genomics Consortium (SGC)
登録日2007-10-29
公開日2007-11-13
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Motor domain of human kinesin family member 3C in complex with ADP.
To be Published
3B36
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Structure of M26L DJ-1
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, Protein DJ-1
著者Lakshminarasimhan, M, Maldonado, M.T, Zhou, W, Fink, A.L, Wilson, M.A.
登録日2007-10-19
公開日2008-01-15
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structural Impact of Three Parkinsonism-Associated Missense Mutations on Human DJ-1.
Biochemistry, 47, 2008
4EID
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BU of 4eid by Molmil
Crystal structure of cytochrome c6 Q57V mutant from Synechococcus sp. PCC 7002
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Cytochrome c6, HEME C
著者Krzywda, S, Bialek, W, Zatwarnicki, P, Jaskolski, M, Szczepaniak, A.
登録日2012-04-05
公開日2013-04-10
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.13 Å)
主引用文献Cytochrome c6 and c6C from Synechococcus sp. PCC 7002 - structure and function.
To be Published
3B9G
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BU of 3b9g by Molmil
Crystal structure of loop deletion mutant of Trypanosoma vivax nucleoside hydrolase (3GTvNH) in complex with ImmH
分子名称: 1,4-DIDEOXY-4-AZA-1-(S)-(9-DEAZAHYPOXANTHIN-9-YL)-D-RIBITOL, CALCIUM ION, IAG-nucleoside hydrolase, ...
著者Vandemeulebroucke, A, De Vos, S, Van Holsbeke, E, Steyaert, J, Versees, W.
登録日2007-11-05
公開日2008-04-22
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献A Flexible Loop as a Functional Element in the Catalytic Mechanism of Nucleoside Hydrolase from Trypanosoma vivax.
J.Biol.Chem., 283, 2008
1OJH
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BU of 1ojh by Molmil
Crystal structure of NblA from PCC 7120
分子名称: 1,2-ETHANEDIOL, NBLA
著者Bienert, R, Baier, K, Lockau, W, Heinemann, U.
登録日2003-07-10
公開日2004-07-15
最終更新日2011-08-03
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal Structure of Nbla from Anabaena Sp. Pcc 7120, a Small Protein Playing a Key Role in Phycobilisome Degradation.
J.Biol.Chem., 281, 2006
2B2U
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BU of 2b2u by Molmil
Tandem chromodomains of human CHD1 complexed with Histone H3 Tail containing trimethyllysine 4 and dimethylarginine 2
分子名称: Chromodomain-helicase-DNA-binding protein 1, Histone H3
著者Flanagan IV, J.F, Mi, L.-Z, Chruszcz, M, Cymborowski, M, Clines, K.L, Kim, Y, Minor, W, Rastinejad, F, Khorasanizadeh, S.
登録日2005-09-19
公開日2005-12-27
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.95 Å)
主引用文献Double chromodomains cooperate to recognize the methylated histone H3 tail.
Nature, 438, 2005
2B2V
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Crystal structure analysis of human CHD1 chromodomains 1 and 2 bound to histone H3 resi 1-15 MeK4
分子名称: Chromodomain-helicase-DNA-binding protein 1, Histone H3
著者Flanagan IV, J.F, Mi, L.-Z, Chruszcz, M, Cymborowski, M, Clines, K.L, Kim, Y, Minor, W, Rastinejad, F, Khorasanizadeh, S.
登録日2005-09-19
公開日2005-12-27
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献Double chromodomains cooperate to recognize the methylated histone H3 tail.
Nature, 438, 2005
2PPZ
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BU of 2ppz by Molmil
NMR solution Structure of the Villin Headpiece Mutant G34L
分子名称: Villin-1
著者Gronwald, W, Hohm, T, Hoffmann, D.
登録日2007-05-01
公開日2007-05-29
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Evolutionary Pareto-optimization of stably folding peptides
Bmc Bioinformatics, 9, 2008
3BZZ
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BU of 3bzz by Molmil
Crystal structural of the mutated R313T EscU/SpaS C-terminal domain
分子名称: EscU
著者Zarivach, R, Deng, W, Vuckovic, M, Felise, H.B, Nguyen, H.V, Miller, S.I, Finlay, B.B, Strynadka, N.C.J.
登録日2008-01-18
公開日2008-04-22
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.407 Å)
主引用文献Structural analysis of the essential self-cleaving type III secretion proteins EscU and SpaS.
Nature, 453, 2008
2B99
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Crystal Structure of an archaeal pentameric riboflavin synthase Complex with a Substrate analog inhibitor
分子名称: 6,7-DIOXO-5H-8-RIBITYLAMINOLUMAZINE, Riboflavin synthase
著者Ramsperger, A, Augustin, M, Schott, A.K, Gerhardt, S, Krojer, T, Eisenreich, W, Illarionov, B, Cushman, M, Bacher, A, Huber, R, Fischer, M.
登録日2005-10-11
公開日2005-11-08
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.22 Å)
主引用文献Crystal Structure of an Archaeal Pentameric Riboflavin Synthase in Complex with a Substrate Analog Inhibitor: stereochemical implications
J.Biol.Chem., 281, 2006
6KLR
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Crystal structure of human WIPI3 in complex with the WIR-peptide from ATG2A
分子名称: chimera ATG2A and WIPI3
著者Ren, J.Q, Liang, R.B, Feng, W.
登録日2019-07-30
公開日2020-04-29
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.21 Å)
主引用文献Multi-site-mediated entwining of the linear WIR-motif around WIPI beta-propellers for autophagy.
Nat Commun, 11, 2020
2B5D
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Crystal structure of the novel alpha-amylase AmyC from Thermotoga maritima
分子名称: alpha-Amylase
著者Dickmanns, A, Ballschmiter, M, Liebl, W, Ficner, R.
登録日2005-09-28
公開日2006-03-07
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structure of the novel alpha-amylase AmyC from Thermotoga maritima.
Acta Crystallogr.,Sect.D, 62, 2006
2B6H
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Structure of human ADP-ribosylation factor 5
分子名称: ADP-ribosylation factor 5, CHLORIDE ION, GUANOSINE-5'-DIPHOSPHATE, ...
著者Tempel, W, Atanassova, A, Sundarajan, E, Dimov, S, Shehab, I, Lew, J, Arrowsmith, C, Edwards, A, Sundstrom, M, Weigelt, J, Bochkarev, A, Park, H, Structural Genomics Consortium (SGC)
登録日2005-10-01
公開日2005-10-11
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.764 Å)
主引用文献Structure of human ADP-ribosylation factor 5
To be Published
2B90
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Crystal structure of the interleukin-4 variant T13DR85A
分子名称: Interleukin-4, SULFATE ION
著者Kraich, M, Klein, M, Patino, E, Harrer, H, Sebald, W, Mueller, T.D.
登録日2005-10-10
公開日2006-05-30
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献A modular interface of IL-4 allows for scalable affinity without affecting specificity for the IL-4 receptor
Bmc Biol., 4, 2006
2B98
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Crystal Structure of an archaeal pentameric riboflavin synthase
分子名称: Riboflavin synthase
著者Ramsperger, A, Augustin, M, Schott, A.K, Gerhardt, S, Krojer, T, Eisenreich, W, Illarionov, B, Cushman, M, Bacher, A, Huber, R, Fischer, M.
登録日2005-10-11
公開日2005-11-08
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal Structure of an Archaeal Pentameric Riboflavin Synthase in Complex with a Substrate Analog Inhibitor: stereochemical implications
J.Biol.Chem., 281, 2006
6IOD
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The structure of UdgX in complex with single-stranded DNA
分子名称: DNA, IRON/SULFUR CLUSTER, Phage SPO1 DNA polymerase-related protein
著者Xie, W, Tu, J.
登録日2018-10-29
公開日2019-07-31
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.66 Å)
主引用文献Suicide inactivation of the uracil DNA glycosylase UdgX by covalent complex formation.
Nat.Chem.Biol., 15, 2019

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