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PDB: 12479 results

5A7T
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Crystal structure of Sulfolobus acidocaldarius Trm10 at 2.4 angstrom resolution.
Descriptor: DI(HYDROXYETHYL)ETHER, TRNA (ADENINE(9)-N1)-METHYLTRANSFERASE
Authors:Van Laer, B, Roovers, M, Wauters, L, Kasprzak, J, Dyzma, M, Deyaert, E, Feller, A, Bujnicki, J, Droogmans, L, Versees, W.
Deposit date:2015-07-09
Release date:2016-01-13
Last modified:2017-08-23
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural and Functional Insights Into tRNA Binding and Adenosine N1-Methylation by an Archaeal Trm10 Homologue.
Nucleic Acids Res., 44, 2016
3ZQF
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Structure of Tetracycline repressor in complex with antiinducer peptide-TAP1
Descriptor: ANTI-INDUCER PEPTIDE TAP1, TETRACYCLINE REPRESSOR PROTEIN CLASS B FROM TRANSPOSON TN10, TETRACYCLINE REPRESSOR PROTEIN CLASS D
Authors:Sevvana, M, Goeke, D, Stoeckle, C, Kaspar, D, Grubmueller, S, Goetz, C, Wimmer, C, Berens, C, Klotzsche, M, Muller, Y.A, Hillen, W.
Deposit date:2011-06-09
Release date:2011-12-28
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.56 Å)
Cite:An Exclusive Alpha/Beta Code Directs Allostery in Tetr-Peptide Complexes.
J.Mol.Biol., 416, 2012
3ZQI
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Structure of Tetracycline repressor in complex with inducer peptide- TIP2
Descriptor: 1,2-ETHANEDIOL, INDUCER PEPTIDE TIP2, MAGNESIUM ION, ...
Authors:Sevvana, M, Goeke, D, Stoeckle, C, Kaspar, D, Grubmueller, S, Goetz, C, Wimmer, C, Berens, C, Klotzsche, M, Muller, Y.A, Hillen, W.
Deposit date:2011-06-09
Release date:2011-12-28
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:An Exclusive Alpha/Beta Code Directs Allostery in Tetr-Peptide Complexes.
J.Mol.Biol., 416, 2012
3ZPX
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USTILAGO MAYDIS LIPASE UM03410, SHORT FORM WITHOUT FLAP
Descriptor: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, LIPASE, ...
Authors:Palm, G.J, Hinrichs, W.
Deposit date:2013-03-04
Release date:2014-03-19
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Lipase from Ustilago
To be Published
3ZPH
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Bacterial chalcone isomerase in closed conformation from Eubacterium ramulus at 2.8 A resolution
Descriptor: CHALCONE ISOMERASE, CHLORIDE ION, GLYCEROL
Authors:Thomsen, M, Palm, G.J, Hinrichs, W.
Deposit date:2013-02-27
Release date:2014-01-15
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Enzymatic conversion of flavonoids using bacterial chalcone isomerase and enoate reductase.
Angew.Chem.Int.Ed.Engl., 53, 2014
5BWO
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Crystal Structure of Human SIRT3 in Complex with a Palmitoyl H3K9 Peptide
Descriptor: NAD-dependent protein deacetylase sirtuin-3, mitochondrial, PALMITIC ACID, ...
Authors:Gai, W, Jiang, H, Liu, D.
Deposit date:2015-06-08
Release date:2016-07-13
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.376 Å)
Cite:Crystal structures of SIRT3 reveal that the alpha 2-alpha 3 loop and alpha 3-helix affect the interaction with long-chain acyl lysine.
Febs Lett., 590, 2016
3ZW8
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BU of 3zw8 by Molmil
Crystal Structure Of Rat Peroxisomal Multifunctional Enzyme Type 1 (rpMFE1) In Apo Form
Descriptor: GLYCEROL, PEROXISOMAL BIFUNCTIONAL ENZYME, SULFATE ION
Authors:Kasaragod, P, Schmitz, W, Hiltunen, J.K, Wierenga, R.K.
Deposit date:2011-07-28
Release date:2012-08-08
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The Isomerase and Hydratase Reaction Mechanism of the Crotonase Active Site of the Multifunctional Enzyme (Type-1), as Deduced from Structures of Complexes with 3S-Hydroxy- Acyl-Coa.
FEBS J., 280, 2013
5BXY
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Crystal structure of RNA methyltransferase from Salinibacter ruber in complex with S-Adenosyl-L-homocysteine
Descriptor: CHLORIDE ION, MAGNESIUM ION, RNA methyltransferase, ...
Authors:Handing, K.B, LaRowe, C, Shabalin, I.G, Stead, M, Hillerich, B.S, Ahmed, M, Bonanno, J, Almo, S.C, Minor, W, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2015-06-09
Release date:2015-07-01
Last modified:2022-04-13
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Crystal structure of RNA methylase family protein from Salinibacterruber in complex with S-Adenosyl-L-homocysteine.
to be published
3ZWQ
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HYPERTHERMOPHILIC ESTERASE FROM THE ARCHEON PYROBACULUM CALIDIFONTIS
Descriptor: ALPHA/BETA HYDROLASE FOLD-3 DOMAIN PROTEIN
Authors:Palm, G.J, Bogdanovic, X, Hinrichs, W.
Deposit date:2011-08-02
Release date:2011-08-17
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:The Crystal Structure of an Esterase from the Hyperthermophilic Microorganism Pyrobaculum Calidifontis Va1 Supports Explanation of its Enantioselectivity.
Appl.Microbiol.Biotechnol., 91, 2011
3ZQG
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Structure of Tetracycline repressor in complex with antiinducer peptide-TAP2
Descriptor: ANTI-INDUCER PEPTIDE TAP2, TETRACYCLINE REPRESSOR PROTEIN CLASS B FROM TRANSPOSON TN10, TETRACYCLINE REPRESSOR PROTEIN CLASS D
Authors:Sevvana, M, Goeke, D, Stoeckle, C, Kaspar, D, Grubmueller, S, Goetz, C, Wimmer, C, Berens, C, Klotzsche, M, Muller, Y.A, Hillen, W.
Deposit date:2011-06-09
Release date:2011-12-28
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:An Exclusive Alpha/Beta Code Directs Allostery in Tetr-Peptide Complexes.
J.Mol.Biol., 416, 2012
3ZQ0
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BU of 3zq0 by Molmil
Visualizing GroEL-ES in the Act of Encapsulating a Non-Native Substrate Protein
Descriptor: 10 KDA CHAPERONIN, 60 KDA CHAPERONIN, ADENOSINE-5'-DIPHOSPHATE, ...
Authors:Chen, D.-H, Madan, D, Weaver, J, Lin, Z, Schroder, G.F, Chiu, W, Rye, H.S.
Deposit date:2013-03-04
Release date:2013-06-19
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (9.2 Å)
Cite:Visualizing Groel/Es in the Act of Encapsulating a Folding Protein
Cell(Cambridge,Mass.), 153, 2013
5C9G
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Crystal Structure of a Putative enoyl-CoA hydratase/isomerase family protein from Hyphomonas neptunium
Descriptor: D-MALATE, Enoyl-CoA hydratase/isomerase family protein, TETRAETHYLENE GLYCOL
Authors:Szlachta, K, Cooper, D.R, Chapman, H.C, Cymbrowski, M.T, Stead, M, Hillerich, B.S, Ahmed, M, Bonanno, J, Seidel, R, Almo, S.C, Minor, W, Hammonds, J, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2015-06-26
Release date:2015-10-14
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal Structure of a Putative enoyl-CoA hydratase/isomerase family protein from Hyphomonas neptunium
to be published
3ZSF
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Crystal structure of the L-cystine solute receptor of Neisseria gonorrhoeae in the unliganded open conformation
Descriptor: ABC TRANSPORTER, PERIPLASMIC BINDING PROTEIN, AMINO ACID
Authors:Bulut, H, Moniot, S, Scheffel, F, Gathmann, S, Licht, A, Saenger, W, Schneider, E.
Deposit date:2011-06-27
Release date:2011-12-14
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.32 Å)
Cite:Crystal Structures of Two Solute Receptors for L-Cystine and L-Cysteine, Respectively, of the Human Pathogen Neisseria Gonorrhoeae.
J.Mol.Biol., 415, 2012
3ZW5
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BU of 3zw5 by Molmil
Crystal structure of the human Glyoxalase domain-containing protein 5
Descriptor: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, GLYOXALASE DOMAIN-CONTAINING PROTEIN 5, ...
Authors:Muniz, J.R.C, Kiyani, W, Froese, S, Vollmar, M, von Delft, F, Burgess-Brown, N, Arrowsmith, C.H, Edwards, A.M, Weigelt, J, Bountra, C, Yue, W.W.
Deposit date:2011-07-28
Release date:2011-08-10
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal Structure of the Human Glyoxalase Domain-Containing Protein 5
To be Published
5CIO
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BU of 5cio by Molmil
Crystal structure of PqqF
Descriptor: ZINC ION, pyrroloquinoline quinone biosynthesis protein PqqF
Authors:Wei, Q, Xu, D, Ran, T, Wang, W.
Deposit date:2015-07-13
Release date:2016-06-08
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal Structure and Function of PqqF Protein in the Pyrroloquinoline Quinone Biosynthetic Pathway
J.Biol.Chem., 291, 2016
3ZQ9
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Structure of a Paenibacillus Polymyxa Xyloglucanase from Glycoside Hydrolase Family 44
Descriptor: (2R,3S,4R,5R)-5-(HYDROXYMETHYL)PIPERIDINE-2,3,4-TRIOL, 1,2-ETHANEDIOL, CALCIUM ION, ...
Authors:Ariza, A, Eklof, J.M, Spadiut, O, Offen, W.A, Roberts, S.M, Besenmatter, W, Friis, E.P, Skjot, M, Wilson, K.S, Brumer, H, Davies, G.
Deposit date:2011-06-08
Release date:2011-06-22
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Structure and Activity of Paenibacillus Polymyxa Xyloglucanase from Glycoside Hydrolase Family 44.
J.Biol.Chem., 286, 2011
3ZWE
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BU of 3zwe by Molmil
Structure of BambL, a lectin from Burkholderia ambifaria, complexed with blood group B epitope
Descriptor: BAMBL LECTIN, alpha-L-fucopyranose, alpha-L-fucopyranose-(1-2)-[alpha-D-galactopyranose-(1-3)]beta-D-galactopyranose-(1-4)-beta-D-glucopyranose, ...
Authors:Audfray, A, Claudinon, J, Abounit, S, Ruvoen-Clouet, N, Larson, G, Wimmerova, M, LePendu, J, Romer, W, Varrot, A, Imberty, A.
Deposit date:2011-07-29
Release date:2011-12-21
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Fucose-Binding Lectin from Opportunistic Pathogen Burkholderia Ambifaria Binds to Both Plant and Human Oligosaccharidic Epitopes.
J.Biol.Chem., 287, 2012
3ZW2
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BU of 3zw2 by Molmil
Structure of the lectin Bambl from Burkholderia ambifaria in complex with blood group H type 1 tetrasaccharide
Descriptor: BAMBL LECTIN, alpha-L-fucopyranose-(1-2)-beta-D-galactopyranose, alpha-L-fucopyranose-(1-2)-beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Audfray, A, Claudinon, J, Abounit, S, Ruvoen-Clouet, N, Larson, G, Wimmerova, M, Lependu, J, Romer, W, Varrot, A, Imberty, A.
Deposit date:2011-07-28
Release date:2011-11-16
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Fucose-Binding Lectin from Opportunistic Pathogen Burkholderia Ambifaria Binds to Both Plant and Human Oligosaccharidic Epitopes.
J.Biol.Chem., 287, 2012
3ZW0
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Structure of BambL lectin from Burkholderia ambifaria
Descriptor: BAMBL LECTIN, alpha-L-fucopyranose
Authors:Audfray, A, Claudinon, J, Abounit, S, Ruvoen-Clouet, N, Larson, G, Wimmerova, M, LePendu, J, Romer, W, Varrot, A, Imberty, A.
Deposit date:2011-07-28
Release date:2011-12-21
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Fucose-Binding Lectin from Opportunistic Pathogen Burkholderia Ambifaria Binds to Both Plant and Human Oligosaccharidic Epitopes.
J.Biol.Chem., 287, 2012
3ZS3
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BU of 3zs3 by Molmil
High resolution structure of Mal d 2, the thaumatin like food allergen from apple
Descriptor: ACETATE ION, ACETIC ACID, FORMIC ACID, ...
Authors:Kopec, J, Smole, U, Pavkov, T, Breiteneder, H, Keller, W.
Deposit date:2011-06-22
Release date:2012-07-11
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:High Resolution Structure of Mal D 2, the Thaumatin Like Food Allergen from Apple
To be Published
5ADY
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BU of 5ady by Molmil
Cryo-EM structures of the 50S ribosome subunit bound with HflX
Descriptor: 23S RRNA, 50S RIBOSOMAL PROTEIN L1, 50S RIBOSOMAL PROTEIN L10, ...
Authors:Zhang, Y, Mandava, C.S, Cao, W, Li, X, Zhang, D, Li, N, Zhang, Y, Zhang, X, Qin, Y, Mi, K, Lei, J, Sanyal, S, Gao, N.
Deposit date:2015-08-25
Release date:2015-10-14
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (4.5 Å)
Cite:Hflx is a Ribosome Splitting Factor Rescuing Stalled Ribosomes Under Stress Conditions
Nat.Struct.Mol.Biol., 22, 2015
4ZSC
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BU of 4zsc by Molmil
Human Cyclophilin D Complexed with an Inhibitor at room temperature
Descriptor: Peptidyl-prolyl cis-trans isomerase F, mitochondrial, ethyl N-[(4-aminobenzyl)carbamoyl]glycinate
Authors:Gelin, M, Delfosse, V, Allemand, F, Hoh, F, Sallaz-Damaz, Y, Pirocchi, M, Bourguet, W, Ferrer, J.-L, Labesse, G, Guichou, J.-F.
Deposit date:2015-05-13
Release date:2015-08-12
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Combining `dry' co-crystallization and in situ diffraction to facilitate ligand screening by X-ray crystallography.
Acta Crystallogr.,Sect.D, 71, 2015
4ZSH
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RXR LBD in complex with 9-cis-13,14-dihydroretinoic acid
Descriptor: (5S,6S,9R,13R)-2,3-didehydro-5,6,7,8,9,10,11,12,13,14-decahydroretinoic acid, NCoA2 peptide, Retinoic acid receptor RXR-alpha
Authors:Rochel, N, Krezel, W, Ruhl, R.
Deposit date:2015-05-13
Release date:2016-03-30
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:9-cis-13,14-Dihydroretinoic Acid Is an Endogenous Retinoid Acting as RXR Ligand in Mice.
Plos Genet., 11, 2015
3ZHH
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X-ray structure of the full-length beta-lactamase from M.tuberculosis
Descriptor: BETA-LACTAMASE, SULFATE ION
Authors:Feiler, C, Fisher, A.C, Marrichi, M.J, Wright, L, Schmidpeter, P.A.M, Blankenfeldt, W, Pavelka, M, DeLisa, M.P.
Deposit date:2012-12-21
Release date:2013-09-25
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Directed Evolution of Mycobacterium Tuberculosis Beta-Lactamase Reveals Gatekeeper Residue that Regulates Antibiotic Resistance and Catalytic Efficiency.
Plos One, 8, 2013
3ZVI
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Methylaspartate ammonia lyase from Clostridium tetanomorphum mutant L384A
Descriptor: CHLORIDE ION, GLYCEROL, MAGNESIUM ION, ...
Authors:Raj, H, Szymanski, W, de Villiers, J, Rozeboom, H.J, Veetil, V.P, Reis, C.R, de Villiers, M, de Wildeman, S, Dekker, F.J, Quax, W.J, Thunnissen, A.M.W.H, Feringa, B.L, Janssen, D.B, Poelarends, G.J.
Deposit date:2011-07-25
Release date:2012-05-02
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Engineering Methylaspartate Ammonia Lyase for the Asymmetric Synthesis of Unnatural Amino Acids.
Nat.Chem., 4, 2012

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數據於2024-07-10公開中

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