Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 12479 results

4OMR
DownloadVisualize
BU of 4omr by Molmil
Crystal structure of Tfu_1878, a putative enoyl-CoA hydratase from Thermobifida fusca YX in complex with acetoacetyl-CoA
Descriptor: ACETOACETYL-COENZYME A, BENZAMIDINE, Enoyl-CoA hydratase
Authors:Langner, K.M, Cooper, D.R, Chapman, H.C, Handing, K.B, Stead, M, Hillerich, B, Ahmed, M, Bonanno, J.B, Seidel, R, Almo, S.C, Minor, W, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2014-01-27
Release date:2014-04-02
Last modified:2022-04-13
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal structure of Tfu_1878, a putative enoyl-CoA hydratase from Thermobifida fusca YX in complex with acetoacetyl-CoA
To be Published
4OWT
DownloadVisualize
BU of 4owt by Molmil
Structural basis of SOSS1 complex assembly
Descriptor: Integrator complex subunit 3, SOSS complex subunit B1, SOSS complex subunit C
Authors:Ren, W, Sun, Q, Tang, X, Song, H.
Deposit date:2014-02-03
Release date:2014-04-16
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural Basis of SOSS1 Complex Assembly and Recognition of ssDNA.
Cell Rep, 6, 2014
2L83
DownloadVisualize
BU of 2l83 by Molmil
A protein from Haloferax volcanii
Descriptor: Small archaeal modifier protein 1
Authors:Zhang, W, Liao, S, Fan, K, Tu, X.
Deposit date:2011-01-03
Release date:2012-01-11
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Ionic strength-dependent conformations of a ubiquitin-like small archaeal modifier protein (SAMP1) from Haloferax volcanii.
Protein Sci., 22, 2013
2LIR
DownloadVisualize
BU of 2lir by Molmil
NMR Solution Structure of Yeast Iso-1-cytochrome c Mutant P71H in oxidized states
Descriptor: Cytochrome c iso-1, HEME C
Authors:Lan, W, Wang, Z, Yang, Z, Zhu, J, Ying, T, Jiang, X, Zhang, X, Wu, H, Liu, M, Tan, X, Cao, C, Huang, Z.X.
Deposit date:2011-08-31
Release date:2011-12-07
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Conformational toggling of yeast iso-1-cytochrome C in the oxidized and reduced States.
Plos One, 6, 2011
1TE6
DownloadVisualize
BU of 1te6 by Molmil
Crystal Structure of Human Neuron Specific Enolase at 1.8 angstrom
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CHLORIDE ION, Gamma enolase, ...
Authors:Chai, G, Brewer, J, Lovelace, L, Aoki, T, Minor, W, Lebioda, L.
Deposit date:2004-05-24
Release date:2004-09-21
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Expression, Purification and the 1.8 A Resolution Crystal Structure of Human Neuron Specific Enolase
J.Mol.Biol., 341, 2004
3LJU
DownloadVisualize
BU of 3lju by Molmil
Crystal structure of full length centaurin alpha-1 bound with the head group of PIP3
Descriptor: (2R)-3-{[(R)-{[(1S,2S,3R,4S,5S,6S)-2,6-dihydroxy-3,4,5-tris(phosphonooxy)cyclohexyl]oxy}(hydroxy)phosphoryl]oxy}propane -1,2-diyl dioctanoate, Arf-GAP with dual PH domain-containing protein 1, ZINC ION
Authors:Shen, L, Tong, Y, Tempel, W, MacKenzie, F, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Weigelt, J, Bochkarev, A, Park, H, Structural Genomics Consortium (SGC)
Deposit date:2010-01-26
Release date:2010-11-24
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.702 Å)
Cite:Phosphorylation-independent dual-site binding of the FHA domain of KIF13 mediates phosphoinositide transport via centaurin alpha1.
Proc.Natl.Acad.Sci.USA, 107, 2010
4O9K
DownloadVisualize
BU of 4o9k by Molmil
Crystal structure of the CBS pair of a putative D-arabinose 5-phosphate isomerase from Methylococcus capsulatus in complex with CMP-Kdo
Descriptor: Arabinose 5-phosphate isomerase, CYTIDINE 5'-MONOPHOSPHATE 3-DEOXY-BETA-D-GULO-OCT-2-ULO-PYRANOSONIC ACID, GLYCEROL
Authors:Shabalin, I.G, Cooper, D.R, Shumilin, I.A, Zimmerman, M.D, Majorek, K.A, Hammonds, J, Hillerich, B.S, Nawar, A, Bonanno, J, Seidel, R, Almo, S.C, Minor, W, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2014-01-02
Release date:2014-01-22
Last modified:2022-04-13
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal structure and kinetic properties of D-arabinose 5-phosphate isomerase from Methylococcus capsulatus
To be Published
2LJI
DownloadVisualize
BU of 2lji by Molmil
Structure of a protein from Haloferax volcanii
Descriptor: Small archaeal modifier protein 2
Authors:Zhang, W, Liao, S, Fan, K.
Deposit date:2011-09-14
Release date:2012-10-10
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structure of a protein from Haloferax volcanii
To be Published
3LPC
DownloadVisualize
BU of 3lpc by Molmil
Crystal structure of a subtilisin-like protease
Descriptor: ACETATE ION, AprB2, CALCIUM ION, ...
Authors:Porter, C.J, Wong, W, Whisstock, J.C, Rood, J.I, Kennan, R.M.
Deposit date:2010-02-05
Release date:2010-12-08
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The Subtilisin-Like Protease AprV2 Is Required for Virulence and Uses a Novel Disulphide-Tethered Exosite to Bind Substrates
Plos Pathog., 6, 2010
7CRQ
DownloadVisualize
BU of 7crq by Molmil
NSD3 bearing E1181K/T1232A dual mutation in complex with 187-bp NCP (2:1 binding mode)
Descriptor: DNA (168-MER), Histone H2A, Histone H2B, ...
Authors:Li, W, Tian, W, Yuan, G, Deng, P, Gozani, O, Patel, D, Wang, Z.
Deposit date:2020-08-14
Release date:2020-10-21
Last modified:2021-03-03
Method:ELECTRON MICROSCOPY (3.15 Å)
Cite:Molecular basis of nucleosomal H3K36 methylation by NSD methyltransferases.
Nature, 590, 2021
1T4J
DownloadVisualize
BU of 1t4j by Molmil
Allosteric Inhibition of Protein Tyrosine Phosphatase 1B
Descriptor: 3-(3,5-DIBROMO-4-HYDROXY-BENZOYL)-2-ETHYL-BENZOFURAN-6-SULFONIC ACID [4-(THIAZOL-2-YLSULFAMOYL)-PHENYL]-AMIDE, Protein-tyrosine phosphatase, non-receptor type 1
Authors:Wiesmann, C, Barr, K.J, Kung, J, Zhu, J, Shen, W, Fahr, B.J, Zhong, M, Taylor, L, Randal, M, McDowell, R.S, Hansen, S.K.
Deposit date:2004-04-29
Release date:2004-07-20
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Allosteric inhibition of protein tyrosine phosphatase 1B
Nat.Struct.Mol.Biol., 11, 2004
1SW5
DownloadVisualize
BU of 1sw5 by Molmil
Crystal structure of ProX from Archeoglobus fulgidus in the ligand free form
Descriptor: CHLORIDE ION, MAGNESIUM ION, osmoprotection protein (proX)
Authors:Schiefner, A, Holtmann, G, Diederichs, K, Welte, W, Bremer, E.
Deposit date:2004-03-30
Release date:2004-09-14
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural basis for the binding of compatible solutes by ProX from the hyperthermophilic archaeon Archaeoglobus fulgidus.
J.Biol.Chem., 279, 2004
2MH7
DownloadVisualize
BU of 2mh7 by Molmil
Solution structure of oxidized [2Fe-2S] ferredoxin PetF from Chlamydomonas reinhardtii
Descriptor: FE2/S2 (INORGANIC) CLUSTER, Ferredoxin, chloroplastic
Authors:Rumpel, S, Siebel, J.F, Fares, C, Reijerse, E.J, Lubitz, W.
Deposit date:2013-11-19
Release date:2014-11-19
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Redirecting Elctrons from Photosystem I to Hydrogenase: Towards Increased Hydrogen Production in Algae
To be Published
1T6Y
DownloadVisualize
BU of 1t6y by Molmil
Crystal structure of ADP, AMP, and FMN bound TM379
Descriptor: ADENOSINE MONOPHOSPHATE, ADENOSINE-5'-DIPHOSPHATE, FLAVIN MONONUCLEOTIDE, ...
Authors:Shin, D.H, Wang, W, Kim, R, Yokota, H, Kim, S.-H, Berkeley Structural Genomics Center (BSGC)
Deposit date:2004-05-07
Release date:2004-08-10
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of ADP bound FAD synthetase
To be Published
4OWP
DownloadVisualize
BU of 4owp by Molmil
Crystal structure of rpn11 in a heterodimer complex with rpn8, representing the active portion of the proteasome lid.
Descriptor: 26S proteasome regulatory subunit RPN11, 26S proteasome regulatory subunit RPN8, ZINC ION
Authors:Yu, Z, Mansour, W, Nakasone, M.A, Glickman, M.H, Dvir, H.
Deposit date:2014-02-03
Release date:2015-08-05
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Crystal structure of rpn11 in a heterodimer complex with rpn8, representing the active portion of the proteasome lid.In preparation.
To Be Published
4OWX
DownloadVisualize
BU of 4owx by Molmil
Structural basis of SOSS1 in complex with a 12nt ssDNA
Descriptor: DNA (5'-D(P*TP*TP*TP*TP*TP*TP*TP*TP*T)-3'), Integrator complex subunit 3, SOSS complex subunit B1
Authors:Ren, W, Sun, Q, Tang, X, Song, H.
Deposit date:2014-02-04
Release date:2014-04-16
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural Basis of SOSS1 Complex Assembly and Recognition of ssDNA.
Cell Rep, 6, 2014
3LIW
DownloadVisualize
BU of 3liw by Molmil
Factor XA in complex with (R)-2-(1-ADAMANTYLCARBAMOYLAMINO)-3-(3-CARBAMIDOYL-PHENYL)-N-PHENETHYL-PROPIONIC ACID AMIDE
Descriptor: (R)-2-(3-ADAMANTAN-1-YL-UREIDO)-3-(3-CARBAMIMIDOYL-PHENYL)-N-PHENETHYL-PROPIONAMIDE, Activated factor Xa heavy chain, CALCIUM ION, ...
Authors:Mueller, M.M, Sperl, S, Sturzebecher, J, Bode, W, Moroder, L.
Deposit date:2010-01-25
Release date:2010-04-07
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.22 Å)
Cite:(R)-3-Amidinophenylalanine-Derived Inhibitors of Factor Xa with a Novel Active-Site Binding Mode
Biol.Chem., 383, 2003
1TGV
DownloadVisualize
BU of 1tgv by Molmil
Structure of E. coli Uridine Phosphorylase complexed with 5-Fluorouridine and sulfate
Descriptor: 5-FLUOROURIDINE, POTASSIUM ION, SULFATE ION, ...
Authors:Bu, W, Settembre, E.C, Sanders, J.M, Begley, T.P, Ealick, S.E.
Deposit date:2004-05-31
Release date:2005-06-14
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structures of E. coli Uridine Phosphorylase
To be Published, 2004
2MNQ
DownloadVisualize
BU of 2mnq by Molmil
1H, 13C, and 15N Chemical Shift Assignments for Thymosin alpha 1
Descriptor: THYMOSIN ALPHA-1
Authors:Nepravishta, R, Mandaliti, W, Eliseo, T, Sinibaldi Vallebona, P, Pica, F, Garaci, E, Paci, M.
Deposit date:2014-04-09
Release date:2015-03-04
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Thymosin alpha 1 inserts N terminus into model membranes assuming a helical conformation.
Expert Opin Biol Ther, 15 Suppl 1, 2015
1TJD
DownloadVisualize
BU of 1tjd by Molmil
The crystal structure of the reduced disulphide bond isomerase, DsbC, from Escherichia coli
Descriptor: Thiol:disulfide interchange protein dsbC
Authors:Banaszak, K, Mechin, I, Frost, G, Rypniewski, W.
Deposit date:2004-06-04
Release date:2004-10-05
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure of the reduced disulfide-bond isomerase DsbC from Escherichia coli.
Acta Crystallogr.,Sect.D, 60, 2004
1TL2
DownloadVisualize
BU of 1tl2 by Molmil
TACHYLECTIN-2 FROM TACHYPLEUS TRIDENTATUS (JAPANESE HORSESHOE CRAB)
Descriptor: 2-acetamido-2-deoxy-alpha-D-glucopyranose, PROTEIN (TACHYLECTIN-2)
Authors:Beisel, H.-G, Kawabata, S, Iwanaga, S, Huber, R, Bode, W.
Deposit date:1998-12-14
Release date:1999-12-15
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:Tachylectin-2: crystal structure of a specific GlcNAc/GalNAc-binding lectin involved in the innate immunity host defense of the Japanese horseshoe crab Tachypleus tridentatus.
EMBO J., 18, 1999
3LPL
DownloadVisualize
BU of 3lpl by Molmil
E. coli pyruvate dehydrogenase complex E1 component E571A mutant
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, MAGNESIUM ION, PHOSPHATE ION, ...
Authors:Furey, W.
Deposit date:2010-02-05
Release date:2010-03-02
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Communication between thiamin cofactors in the Escherichia coli pyruvate dehydrogenase complex E1 component active centers: evidence for a "direct pathway" between the 4'-aminopyrimidine N1' atoms.
J.Biol.Chem., 285, 2010
1SV2
DownloadVisualize
BU of 1sv2 by Molmil
Crystal Structure of Peptide Deformylase from Leptospira Interrogans (LiPDF) at pH7.5
Descriptor: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, FORMIC ACID, Peptide deformylase, ...
Authors:Zhou, Z, Song, X, Li, Y, Gong, W.
Deposit date:2004-03-27
Release date:2005-08-09
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:Novel conformational states of peptide deformylase from pathogenic bacterium Leptospira interrogans: implications for population shift
J.Biol.Chem., 280, 2005
1ST8
DownloadVisualize
BU of 1st8 by Molmil
Crystal structure of fructan 1-exohydrolase IIa from Cichorium intybus
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Verhaest, M, Van den Ende, W, De Ranter, C.J, Van Laere, A, Rabijns, A.
Deposit date:2004-03-25
Release date:2005-03-01
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:X-ray diffraction structure of a plant glycosyl hydrolase family 32 protein: fructan 1-exohydrolase IIa of Cichorium intybus.
Plant J., 41, 2005
4P5B
DownloadVisualize
BU of 4p5b by Molmil
Crystal structure of a UMP/dUMP methylase PolB from Streptomyces cacaoi bound with 5-Br dUMP
Descriptor: 5-BROMO-2'-DEOXYURIDINE-5'-MONOPHOSPHATE, FLAVIN-ADENINE DINUCLEOTIDE, SULFATE ION, ...
Authors:Li, Y, Chen, W, Li, J, Xia, Z, Deng, Z, Zhou, J.
Deposit date:2014-03-15
Release date:2015-12-09
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.274 Å)
Cite:Crystal structure of a UMP/dUMP methylase PolB form Streptomyces cacaoi bound with 5-Br dUMP
To Be Published

222415

数据于2024-07-10公开中

PDB statisticsPDBj update infoContact PDBjnumon