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PDB: 12479 results

2EIG
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BU of 2eig by Molmil
Lotus tetragonolobus seed lectin (Isoform)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, MANGANESE (II) ION, ...
Authors:Moreno, F.B.M.B, Vicoti, M.M, Abrego, J.R.B, de Oliveira, T.M, Bezerra, G.A, Cavada, B.S, Filgueira de Azevedo Jr, W.
Deposit date:2007-03-13
Release date:2008-03-04
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:Identification of a new quaternary association for legume lectins
J.Struct.Biol., 161, 2008
2E5O
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'Solution structure of the TRIP_4C domain of target of activating signal cointegrator 1
Descriptor: Activating signal cointegrator 1
Authors:Dang, W, Muto, Y, Inoue, M, Kigawa, T, Shirouzu, M, Terada, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-12-22
Release date:2008-01-01
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the TRIP_4C domain of target of activating signal cointegrator 1
To be Published
2E6E
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Crystal structure of the stationary phase survival protein SurE from Thermus thermophilus HB8
Descriptor: 5'-nucleotidase surE
Authors:Iwasaki, W, Miki, K.
Deposit date:2006-12-26
Release date:2007-08-28
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal Structure of the Stationary Phase Survival Protein SurE with Metal Ion and AMP
J.Mol.Biol., 371, 2007
2E69
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BU of 2e69 by Molmil
Crystal structure of the stationary phase survival protein SurE from Thermus thermophilus HB8 in complex with sulfate
Descriptor: 5'-nucleotidase surE, GLYCEROL, SULFATE ION
Authors:Iwasaki, W, Miki, K.
Deposit date:2006-12-26
Release date:2007-08-28
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal Structure of the Stationary Phase Survival Protein SurE with Metal Ion and AMP
J.Mol.Biol., 371, 2007
2FCP
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BU of 2fcp by Molmil
FERRIC HYDROXAMATE UPTAKE RECEPTOR (FHUA) FROM E.COLI
Descriptor: 2-TRIDECANOYLOXY-PENTADECANOIC ACID, 3-OXO-PENTADECANOIC ACID, ACETOACETIC ACID, ...
Authors:Hofmann, E, Ferguson, A.D, Diederichs, K, Welte, W.
Deposit date:1998-10-15
Release date:1999-01-13
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Siderophore-mediated iron transport: crystal structure of FhuA with bound lipopolysaccharide.
Science, 282, 1998
2FED
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Structure of the E203Q mutant of the Cl-/H+ exchanger CLC-ec1 from E.Coli
Descriptor: Fab fragment, heavy chain, light chain, ...
Authors:Accardi, A, Walden, M.P, Nguitragool, W, Jayaram, H, Williams, C, Miller, C.
Deposit date:2005-12-15
Release date:2006-01-03
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (3.317 Å)
Cite:Separate ion pathways in a Cl-/H+ exchanger
J.Gen.Physiol., 126, 2005
2FUZ
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BU of 2fuz by Molmil
UGL hexagonal crystal structure without glycine and DTT molecules
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, Unsaturated glucuronyl hydrolase
Authors:Itoh, T, Hashimoto, W, Mikami, B, Murata, K.
Deposit date:2006-01-28
Release date:2006-05-30
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Substrate recognition by unsaturated glucuronyl hydrolase from Bacillus sp. GL1
Biochem.Biophys.Res.Commun., 344, 2006
2FOL
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BU of 2fol by Molmil
Crystal structure of human RAB1A in complex with GDP
Descriptor: GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Ras-related protein Rab-1A, ...
Authors:Wang, J, Tempel, W, Shen, Y, Shen, L, Arrowsmith, C, Edwards, A, Sundstrom, M, Weigelt, J, Bochkarev, A, Park, H, Structural Genomics Consortium (SGC)
Deposit date:2006-01-13
Release date:2006-01-31
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.631 Å)
Cite:Crystal structure of human RAB1A in complex with GDP
To be Published
2FV2
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BU of 2fv2 by Molmil
Crystal Structure Analysis of human Rcd-1 conserved region
Descriptor: MANGANESE (II) ION, RCD1 required for cell differentiation1 homolog
Authors:Garces, R.G, Gillon, W, Pai, E.F.
Deposit date:2006-01-28
Release date:2007-01-09
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Atomic model of human Rcd-1 reveals an armadillo-like-repeat protein with in vitro nucleic acid binding properties.
Protein Sci., 16, 2007
2FQD
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BU of 2fqd by Molmil
Crystal Structures of E. coli Laccase CueO under different copper binding situations
Descriptor: Blue copper oxidase cueO, CITRIC ACID, COPPER (II) ION, ...
Authors:Li, X, Wei, Z, Zhang, M, Teng, M, Gong, W.
Deposit date:2006-01-18
Release date:2007-01-30
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structures of E. coli laccase CueO at different copper concentrations.
Biochem.Biophys.Res.Commun., 354, 2007
2G1D
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BU of 2g1d by Molmil
Solution Structure of Ribosomal Protein S24E from Thermoplasma acidophilum
Descriptor: 30S ribosomal protein S24e
Authors:Jeon, B.-Y, Hong, E.-M, Jung, J.-W, Yee, A, Arrowsmith, C.H, Lee, W.
Deposit date:2006-02-14
Release date:2007-02-14
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of TA1092, a ribosomal protein S24e from Thermoplasma acidophilum
Proteins, 64, 2006
2FXO
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Structure of the human beta-myosin S2 fragment
Descriptor: Myosin heavy chain, cardiac muscle beta isoform
Authors:Blankenfeldt, W, Thoma, N.H, Wray, J.S, Gautel, M, Schlichting, I.
Deposit date:2006-02-06
Release date:2006-11-21
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structures of human cardiac {beta}-myosin II S2-{Delta} provide insight into the functional role of the S2 subfragment
Proc.Natl.Acad.Sci.Usa, 103, 2006
2FZF
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BU of 2fzf by Molmil
Hypothetical Protein Pfu-1136390-001 From Pyrococcus furiosus
Descriptor: hypothetical protein
Authors:Fu, Z.-Q, Liu, Z.-J, Lee, D, Kelley, L, Chen, L, Tempel, W, Shah, N, Horanyi, P, Lee, H.S, Habel, J, Dillard, B.D, Nguyen, D, Chang, S.-H, Zhang, H, Chang, J, Sugar, F.J, Poole, F.L, Jenney Jr, F.E, Adams, M.W.W, Rose, J.P, Wang, B.-C, Southeast Collaboratory for Structural Genomics (SECSG)
Deposit date:2006-02-09
Release date:2006-02-21
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Hypothetical Protein Pfu-1136390-001 From Pyrococcus furiosus
To be published
2G25
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BU of 2g25 by Molmil
E. Coli Pyruvate Dehydrogenase Phosphonolactylthiamin Diphosphate Complex
Descriptor: 3-[(4-AMINO-2-METHYLPYRIMIDIN-5-YL)METHYL]-2-{(1S)-1-HYDROXY-1-[(R)-HYDROXY(METHOXY)PHOSPHORYL]ETHYL}-5-(2-{[(S)-HYDROXY(PHOSPHONOOXY)PHOSPHORYL]OXY}ETHYL)-4-METHYL-1,3-THIAZOL-3-IUM, MAGNESIUM ION, PHOSPHATE ION, ...
Authors:Furey, W, Arjunan, P, Chandrasekhar, K.
Deposit date:2006-02-15
Release date:2006-04-25
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:A Thiamin-bound, Pre-decarboxylation Reaction Intermediate Analogue in the Pyruvate Dehydrogenase E1 Subunit Induces Large Scale Disorder-to-Order Transformations in the Enzyme and Reveals Novel Structural Features in the Covalently Bound Adduct.
J.Biol.Chem., 281, 2006
2G3K
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BU of 2g3k by Molmil
Crystal structure of the C-terminal domain of Vps28
Descriptor: Vacuolar protein sorting-associated protein VPS28
Authors:Pineda-Molina, E, Belrhali, H, Piefer, A.J, Akula, I, Bates, P, Weissenhorn, W.
Deposit date:2006-02-20
Release date:2006-06-27
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3.05 Å)
Cite:The crystal structure of the C-terminal domain of Vps28 reveals a conserved surface required for Vps20 recruitment.
Traffic, 7, 2006
5HBW
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BU of 5hbw by Molmil
RNA primer-template complex with 2-methylimidazole-activated monomer analogue
Descriptor: RNA (5'-R(*(LCC)P*(TLN)P*(LCG)P*UP*AP*CP*A)-3'), [(2~{R},3~{S},4~{R},5~{R})-5-(2-azanyl-6-oxidanylidene-1~{H}-purin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-(3-methyl-1~{H}-pyrazol-4-yl)phosphinic acid
Authors:Zhang, W, Tam, C.P, Szostak, J.W.
Deposit date:2016-01-03
Release date:2016-12-07
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Unusual Base-Pairing Interactions in Monomer-Template Complexes.
ACS Cent Sci, 2, 2016
5HNH
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BU of 5hnh by Molmil
Crystal structure of pyrene- and phenanthrene-modified DNA in complex with the BpuJ1 endonuclease binding domain
Descriptor: DNA (5'-D(*GP*(YPY)P*AP*CP*CP*CP*GP*TP*GP*GP*A)-3'), DNA (5'-D(*TP*CP*CP*AP*CP*GP*GP*GP*T*(YPY)*(YPY)*C)-3'), Restriction endonuclease R.BpuJI
Authors:Probst, M, Aeschimann, W, Chau, T.-T.-H, Langenegger, S.M, Stocker, A, Haener, R.
Deposit date:2016-01-18
Release date:2016-08-17
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.876 Å)
Cite:Structural insight into DNA-assembled oligochromophores: crystallographic analysis of pyrene- and phenanthrene-modified DNA in complex with BpuJI endonuclease.
Nucleic Acids Res., 44, 2016
5HU2
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BU of 5hu2 by Molmil
Sugar kinases from Synechococcus elongatus PCC7942-T11A
Descriptor: Probable sugar kinase
Authors:Xie, Y, Li, M, Chang, W.
Deposit date:2016-01-27
Release date:2016-06-08
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal Structures of Putative Sugar Kinases from Synechococcus Elongatus PCC 7942 and Arabidopsis Thaliana
Plos One, 11, 2016
5H71
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BU of 5h71 by Molmil
Structure of alginate-binding protein AlgQ2 in complex with an alginate trisaccharide
Descriptor: 4-deoxy-alpha-L-erythro-hex-4-enopyranuronic acid-(1-4)-beta-D-mannopyranuronic acid-(1-4)-beta-D-mannopyranuronic acid, AlgQ2, CALCIUM ION, ...
Authors:Uenishi, K, Kaneko, A, Maruyama, Y, Mikami, B, Murata, K, Hashimoto, W.
Deposit date:2016-11-15
Release date:2017-08-09
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.549 Å)
Cite:A solute-binding protein in the closed conformation induces ATP hydrolysis in a bacterial ATP-binding cassette transporter involved in the import of alginate
J. Biol. Chem., 292, 2017
5HZ0
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BU of 5hz0 by Molmil
Plant peptide hormone receptor RGFR1 in complex with RGF2
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ASP-PTR-TRP-LYS-PRO-ARG-HIS-HIS-PRO-HYP-ARG-ASN-ASN, ...
Authors:Song, W, Han, Z, Chai, J.
Deposit date:2016-02-02
Release date:2017-04-05
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.56 Å)
Cite:Plant Receptor
To Be Published
5HZQ
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BU of 5hzq by Molmil
Crystal structure of cellular retinoic acid binding protein 2 (CRABP2)-aryl fluorosulfate covalent conjugate
Descriptor: 4'-[(3,6,9,12-tetraoxapentadec-14-yn-1-yl)oxy][1,1'-biphenyl]-4-yl sulfurofluoridate, Cellular retinoic acid-binding protein 2, GLYCEROL
Authors:Chen, W, Mortenson, D.E, Wilson, I.A, Kelly, J.W.
Deposit date:2016-02-02
Release date:2016-06-01
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Arylfluorosulfates Inactivate Intracellular Lipid Binding Protein(s) through Chemoselective SuFEx Reaction with a Binding Site Tyr Residue.
J.Am.Chem.Soc., 138, 2016
5HLT
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BU of 5hlt by Molmil
Crystal structure of pyrene- and phenanthrene-modified DNA in complex with the BpuJ1 endonuclease binding domain
Descriptor: DNA (5'-D(*GP*YPY*TP*AP*CP*CP*CP*GP*TP*GP*GP*A)-3'), DNA (5'-D(*TP*CP*CP*AP*CP*GP*GP*GP*TP*AP*YPY*C)-3'), Restriction endonuclease R.BpuJI
Authors:Probst, M, Aeschimann, W, Chau, T.-T.-H, Langenegger, S.M, Stocker, A, Haener, R.
Deposit date:2016-01-15
Release date:2016-08-17
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.672 Å)
Cite:Structural insight into DNA-assembled oligochromophores: crystallographic analysis of pyrene- and phenanthrene-modified DNA in complex with BpuJI endonuclease.
Nucleic Acids Res., 44, 2016
5HI0
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BU of 5hi0 by Molmil
The Substrate Binding Mode and Chemical Basis of a Reaction Specificity Switch in Oxalate Decarboxylase
Descriptor: COBALT (II) ION, OXALATE ION, Oxalate decarboxylase OxdC, ...
Authors:Zhu, W, Easthon, L.M, Reinhardt, L.A, Tu, C, Cohen, S.E, Silverman, D.N, Allen, K.N, Richards, N.G.J.
Deposit date:2016-01-11
Release date:2016-04-06
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.602 Å)
Cite:Substrate Binding Mode and Molecular Basis of a Specificity Switch in Oxalate Decarboxylase.
Biochemistry, 55, 2016
5HIQ
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BU of 5hiq by Molmil
Crystal Structure of PQS Response Protein PqsE in Complex with 2-(1H-pyrrol-1-yl)benzoic acid
Descriptor: 2-pyrrol-1-ylbenzoic acid, FE (III) ION, PqsE
Authors:Witzgall, F, Blankenfeldt, W.
Deposit date:2016-01-12
Release date:2016-04-27
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Dissecting the Multiple Roles of PqsE in Pseudomonas aeruginosa Virulence by Discovery of Small Tool Compounds.
Acs Chem.Biol., 11, 2016
7RNC
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BU of 7rnc by Molmil
Crystal structure of caspase-3 with inhibitor Ac-VDVVD-CHO
Descriptor: Ac-VDVVD-CHO, Caspase-3 subunit p12, Caspase-3 subunit p17
Authors:McCue, W, Finzel, B.C.
Deposit date:2021-07-29
Release date:2022-06-15
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Structural Studies to Enable Drug Discovery
Thesis, 2021

222415

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