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PDB: 34568 件

8T0H
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Backbone Dialkylation in Peptide Hairpins: (S)-Ethylpropylglycine variant
分子名称: Immunoglobulin G-binding protein G
著者Heath, S.L, Horne, W.S, Lengyel, G.A.
登録日2023-06-01
公開日2023-08-16
最終更新日2023-11-15
実験手法SOLUTION NMR
主引用文献Effects of chirality and side chain length in C alpha , alpha-dialkylated residues on beta-hairpin peptide folded structure and stability.
Org.Biomol.Chem., 21, 2023
3IO9
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BU of 3io9 by Molmil
BimL12Y in complex with Mcl-1
分子名称: Bcl-2-like protein 11, Induced myeloid leukemia cell differentiation protein Mcl-1, ZINC ION
著者Czabotar, P.E, Lee, E.F, Yang, H, Sleebs, B.E, Lessene, G, Colman, P.M, Smith, B.J, Fairlie, W.D.
登録日2009-08-14
公開日2009-09-01
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Conformational changes in Bcl-2 pro-survival proteins determine their capacity to bind ligands.
J.Biol.Chem., 284, 2009
1E8G
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STRUCTURE OF THE H61T DOUBLE MUTANT OF VANILLYL-ALCOHOL OXIDASE IN COMPLEX WITH FLUORO-CRESOL
分子名称: ALPHA,ALPHA,ALPHA-TRIFLUORO-P-CRESOL, FLAVIN-ADENINE DINUCLEOTIDE, VANILLYL-ALCOHOL OXIDASE
著者Fraaije, M.W, Mattevi, A.
登録日2000-09-20
公開日2000-09-21
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural Analysis of Flavinylation in Vanillyl-Alcohol Oxidase
J.Biol.Chem., 275, 2001
8T0I
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Backbone Dialkylation in Peptide Hairpins: (R)-Ethylpropylglycine variant
分子名称: Immunoglobulin G-binding protein G
著者Heath, S.L, Horne, W.S, Lengyel, G.A.
登録日2023-06-01
公開日2023-08-16
最終更新日2023-11-15
実験手法SOLUTION NMR
主引用文献Effects of chirality and side chain length in C alpha , alpha-dialkylated residues on beta-hairpin peptide folded structure and stability.
Org.Biomol.Chem., 21, 2023
6B3P
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Crystal structure of CBMbc (family CBM26) from Eubacterium rectale Amy13K in Complex with Maltoheptaose
分子名称: 1,2-ETHANEDIOL, Amy13K, FORMIC ACID, ...
著者Cockburn, D.W, Wawrzak, Z, Perez Medina, K, Koropatkin, N.M.
登録日2017-09-22
公開日2017-11-29
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.01 Å)
主引用文献Novel carbohydrate binding modules in the surface anchored alpha-amylase of Eubacterium rectale provide a molecular rationale for the range of starches used by this organism in the human gut.
Mol. Microbiol., 107, 2018
2XV9
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The solution structure of ABA-1A saturated with oleic acid
分子名称: ABA-1A1 REPEAT UNIT
著者Smith, B.O, Kennedy, M.W, Cooper, A, Meenan, N.A.G, Bromek, K.
登録日2010-10-25
公開日2011-08-10
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Solution structure of a repeated unit of the ABA-1 nematode polyprotein allergen of Ascaris reveals a novel fold and two discrete lipid-binding sites.
PLoS Negl Trop Dis, 5, 2011
5C7H
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Crystal structure of aldo-keto reductase from Sinorhizobium meliloti 1021 in complex with NADPH
分子名称: Aldo-keto reductase, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
著者Gasiorowska, O.A, Shabalin, I.G, Handing, K.B, Seidel, R, Bonanno, J, Almo, S.C, Minor, W, New York Structural Genomics Research Consortium (NYSGRC)
登録日2015-06-24
公開日2015-07-08
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Crystal structure of aldo-keto reductase from Sinorhizobium meliloti 1021 in complex with NADPH
to be published
7KWK
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DNA-DB1879 complex: The DNA sequence 5'-CGCGAATTCGCG-3' presents a binding site for the heterocyclic small molecule (DB1879).
分子名称: 2-[5-(4-carbamimidoylphenyl)thiophen-2-yl]-1H-indole-6-carboximidamide, DNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3'), MAGNESIUM ION
著者Ogbonna, E, Fang, Z, Wilson, D.W.
登録日2020-12-01
公開日2021-12-08
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.37 Å)
主引用文献Drug design and DNA structural research inspired by the Neidle laboratory: DNA minor groove binding and transcription factor inhibition by thiophene diamidines.
Bioorg.Med.Chem., 68, 2022
3IME
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BU of 3ime by Molmil
Crystal Structure of Mycobacterium Tuberculosis Pantothenate Synthetase at 2.40 Ang resolution in complex with fragment compound 1-Benzofuran-2-carboxylic acid
分子名称: 1-benzofuran-2-carboxylic acid, ETHANOL, GLYCEROL, ...
著者Ciulli, A, Hung, A.W, Silvestre, H.L, Wen, S, Blundell, T.L, Abell, C.
登録日2009-08-10
公開日2009-10-13
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.39 Å)
主引用文献Application of fragment growing and fragment linking to the discovery of inhibitors of Mycobacterium tuberculosis pantothenate synthetase.
Angew.Chem.Int.Ed.Engl., 48, 2009
3LDB
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BU of 3ldb by Molmil
Structure of JMJD6 complexd with ALPHA-KETOGLUTARATE and Fab Fragment.
分子名称: 2-OXOGLUTARIC ACID, Bifunctional arginine demethylase and lysyl-hydroxylase JMJD6, FE (III) ION, ...
著者Hong, X, Zang, J, White, J, Kappler, J.W, Wang, C, Zhang, G.
登録日2010-01-12
公開日2010-08-04
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Interaction of JMJD6 with single-stranded RNA.
Proc.Natl.Acad.Sci.USA, 107, 2010
8FB5
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BU of 8fb5 by Molmil
Crystal structure of Ky15.11-S100IK Fab in complex with circumsporozoite protein KQPA peptide
分子名称: Circumsporozoite protein KQPA peptide, Ky15.11-SK Antibody, heavy chain, ...
著者Kang, R.W, Thai, E, Julien, J.P.
登録日2022-11-29
公開日2023-11-01
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Molecular determinants of cross-reactivity and potency by VH3-33 antibodies against the Plasmodium falciparum circumsporozoite protein.
Cell Rep, 42, 2023
8TK7
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Myxococcus xanthus EncA protein shell with compartmentalized SNAP-tag cargo protein
分子名称: Methylated-DNA--protein-cysteine methyltransferase, Type 1 encapsulin shell protein EncA
著者Andreas, M.P, Kwon, S, Giessen, T.W.
登録日2023-07-25
公開日2023-09-13
最終更新日2023-09-20
実験手法ELECTRON MICROSCOPY (2.53 Å)
主引用文献Structure and heterogeneity of a highly cargo-loaded encapsulin shell.
J.Struct.Biol., 215, 2023
1E8H
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STRUCTURE OF THE H61T MUTANT OF THE FLAVOENZYME VANILLYL-ALCOHOL OXIDASE IN THE APO FORM COMPLEXED BY ADP
分子名称: ADENOSINE-5'-DIPHOSPHATE, VANILLYL-ALCOHOL OXIDASE
著者Mattevi, A, Fraaije, M.W.
登録日2000-09-20
公開日2000-09-21
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structural Analysis of Flavinylation in Vanillyl-Alcohol Oxidase
J.Biol.Chem., 275, 2001
1PEE
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BU of 1pee by Molmil
Crystal Structure of Nitrophorin 2 complex with imidazole
分子名称: IMIDAZOLE, Nitrophorin 2, PROTOPORPHYRIN IX CONTAINING FE
著者Weihsel, A, Montfort, W.R.
登録日2003-05-21
公開日2004-06-01
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Conformational change and heme ruffling in nitrophorin 2, a nitric oxide carrier from kissing bug.
To be Published
7W66
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BU of 7w66 by Molmil
Crystal structure of a PSH1 mutant in complex with ligand
分子名称: PSH1, bis(2-hydroxyethyl) benzene-1,4-dicarboxylate
著者Gao, J, Lara, P, Li, Z.S, Han, X, Wei, R, Liu, W.D.
登録日2021-12-01
公開日2022-09-14
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.96 Å)
主引用文献Multiple Substrate Binding Mode-Guided Engineering of a Thermophilic PET Hydrolase.
Acs Catalysis, 12, 2022
8TWU
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BU of 8twu by Molmil
Crystal structure of Cytochrome P450 AspB bound to N1-methylated cyclo-L-Trp-L-Pro
分子名称: (3S,5S,8aS)-3-[(1-methyl-1H-indol-3-yl)methyl]hexahydropyrrolo[1,2-a]pyrazine-1,4-dione, Cytochrome P450 AspB, PROTOPORPHYRIN IX CONTAINING FE, ...
著者Gering, H.E, Li, X, Tang, H, Swartz, P.D, Chang, W.-C, Makris, T.M.
登録日2023-08-21
公開日2023-09-20
実験手法X-RAY DIFFRACTION (1.84 Å)
主引用文献A Ferric-Superoxide Intermediate Initiates P450-Catalyzed Cyclic Dipeptide Dimerization.
J.Am.Chem.Soc., 145, 2023
4CBY
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Design, synthesis, and biological evaluation of potent and selective Class IIa HDAC inhibitors as a potential therapy for Huntington's disease
分子名称: (1R,2R,3R)-2-[4-(1,3-oxazol-5-yl)phenyl]-N-oxidanyl-3-phenyl-cyclopropane-1-carboxamide, HISTONE DEACETYLASE 4, SODIUM ION, ...
著者Burli, R.W, Luckhurst, C.A, Aziz, O, Matthews, K.L, Yates, D, Lyons, K.A, Beconi, M, McAllister, G, Breccia, P, Stott, A.J, Penrose, S.D, Wall, M, Lamers, M, Leonard, P, Mueller, I, Richardson, C.M, Jarvis, R, Stones, L, Hughes, S, Wishart, G, Haughan, A.F, O'Connell, C, Mead, T, McNeil, H, Vann, J, Mangette, J, Maillard, M, Beaumont, V, Munoz-Sanjuan, I, Dominguez, C.
登録日2013-10-17
公開日2013-12-11
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.72 Å)
主引用文献Design, synthesis, and biological evaluation of potent and selective class IIa histone deacetylase (HDAC) inhibitors as a potential therapy for Huntington's disease.
J. Med. Chem., 56, 2013
7W6C
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BU of 7w6c by Molmil
Crystal structure of a PSH1 in complex with ligand J1K
分子名称: 4-(2-hydroxyethylcarbamoyl)benzoic acid, PSH1
著者Gao, J, Lara, P, Li, Z.S, Han, X, Wei, R, Liu, W.D.
登録日2021-12-01
公開日2022-09-14
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Multiple Substrate Binding Mode-Guided Engineering of a Thermophilic PET Hydrolase.
Acs Catalysis, 12, 2022
4CEY
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BU of 4cey by Molmil
Crystal structure of human Enterovirus 71 in complex with the uncoating inhibitor NLD
分子名称: 1-(2-aminopyridin-4-yl)-3-[(3S)-5-{4-[(E)-(ethoxyimino)methyl]phenoxy}-3-methylpentyl]imidazolidin-2-one, SODIUM ION, VP1, ...
著者De Colibus, L, Wang, X, Spyrou, J.A.B, Kelly, J, Ren, J, Grimes, J, Puerstinger, G, Stonehouse, N, Walter, T.S, Hu, Z, Wang, J, Li, X, Peng, W, Rowlands, D, Fry, E.E, Rao, Z, Stuart, D.I.
登録日2013-11-12
公開日2014-02-12
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献More-Powerful Virus Inhibitors from Structure-Based Analysis of Hev71 Capsid-Binding Molecules
Nat.Struct.Mol.Biol., 21, 2014
6BD9
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Saccharomyces cerevisiae acetohydroxyacid synthase
分子名称: Acetolactate synthase catalytic subunit, mitochondrial, FLAVIN-ADENINE DINUCLEOTIDE, ...
著者Guddat, L.W, Lonhienne, T.
登録日2017-10-22
公開日2017-11-08
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.982 Å)
主引用文献High resolution crystal structures of the acetohydroxyacid synthase-pyruvate complex provide new insights into its catalytic mechanism
Chemistryselect, 2017
1PGY
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BU of 1pgy by Molmil
Solution structure of the UBA domain in Saccharomyces cerevisiae protein, Swa2p
分子名称: Swa2p
著者Chim, N, Gall, W.E, Xiao, J, Harris, M.P, Graham, T.R, Krezel, A.M.
登録日2003-05-28
公開日2004-03-23
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Solution structure of the ubiquitin-binding domain in Swa2p from Saccharomyces cerevisiae.
PROTEINS: STRUCT.,FUNCT.,GENET., 54, 2004
4CDU
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BU of 4cdu by Molmil
Crystal structure of human Enterovirus 71 in complex with the uncoating inhibitor GPP3
分子名称: 1-[(3S)-5-[4-[(E)-ETHOXYIMINOMETHYL]PHENOXY]-3-METHYL-PENTYL]-3-PYRIDIN-4-YL-IMIDAZOLIDIN-2-ONE, CHLORIDE ION, SODIUM ION, ...
著者De Colibus, L, Wang, X, Spyrou, J.A.B, Kelly, J, Ren, J, Grimes, J, Puerstinger, G, Stonehouse, N, Walter, T.S, Hu, Z, Wang, J, Li, X, Peng, W, Rowlands, D, Fry, E.E, Rao, Z, Stuart, D.I.
登録日2013-11-06
公開日2014-02-12
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献More-Powerful Virus Inhibitors from Structure-Based Analysis of Hev71 Capsid-Binding Molecules
Nat.Struct.Mol.Biol., 21, 2014
8FB8
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Crystal structure of Ky15.10-Y100EK Fab in complex with circumsporozoite protein KQPA peptide
分子名称: Circumsporozoite protein KQPA peptide, GLYCEROL, Ky15.10-YK Antibody, ...
著者Kang, R.W, Thai, E, Julien, J.P.
登録日2022-11-29
公開日2023-11-01
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.69 Å)
主引用文献Molecular determinants of cross-reactivity and potency by VH3-33 antibodies against the Plasmodium falciparum circumsporozoite protein.
Cell Rep, 42, 2023
5TAL
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Structure of rabbit RyR1 (Caffeine/ATP/Ca2+ dataset, class 1&2)
分子名称: ADENOSINE-5'-TRIPHOSPHATE, CAFFEINE, CALCIUM ION, ...
著者Clarke, O.B, des Georges, A, Zalk, R, Marks, A.R, Hendrickson, W.A, Frank, J.
登録日2016-09-10
公開日2016-10-12
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (4.3 Å)
主引用文献Structural Basis for Gating and Activation of RyR1.
Cell, 167, 2016
5C8Z
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ZHD-ZGR complex after ZHD crystal soaking in ZEN for 30min
分子名称: 2,4-dihydroxy-6-[(1E,10S)-10-hydroxy-6-oxoundec-1-en-1-yl]benzoic acid, FORMIC ACID, GLYCEROL, ...
著者Hu, X.-J, Qi, Q, Yang, W.-J.
登録日2015-06-26
公開日2016-06-29
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献The structure of a complex of the lactonohydrolase zearalenone hydrolase with the hydrolysis product of zearalenone at 1.60 angstrom resolution.
Acta Crystallogr F Struct Biol Commun, 73, 2017

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