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PDB: 101 件
369D
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BU of 369d by Molmil
STRUCTURAL VARIABILITY OF A-DNA IN CRYSTALS OF THE OCTAMER D(PCPCPCPGPCPGPGPG)
分子名称: DNA (5'-D(P*CP*CP*CP*GP*CP*GP*GP*G)-3')
著者Fernandez, L.G, Subirana, J.A, Verdaguer, N, Pyshnyi, D, Campos, L.
登録日1997-12-19
公開日1998-07-15
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural variability of A-DNA in crystals of the octamer d(pCpCpCpGpCpGpGpG)
J.Biomol.Struct.Dyn., 15, 1997
372D
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BU of 372d by Molmil
STRUCTURAL VARIABILITY OF A-DNA IN CRYSTALS OF THE OCTAMER D(PCPCPCPGPCPGPGPG)
分子名称: DNA (5'-D(P*CP*CP*CP*GP*CP*GP*GP*G)-3')
著者Fernandez, L.G, Subirana, J.A, Verdaguer, N, Pyshnyi, D, Campos, L.
登録日1997-12-19
公開日1998-07-15
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structural variability of A-DNA in crystals of the octamer d(pCpCpCpGpCpGpGpG)
J.Biomol.Struct.Dyn., 15, 1997
2QJ1
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BU of 2qj1 by Molmil
Crystal structure of infectious bursal disease virus VP1 polymerase incubated with an oligopeptide mimicking the VP3 C-terminus
分子名称: Infectious bursal disease virus VP1 polymerase
著者Garriga, D, Navarro, A, Querol-Audi, J, Abaitua, F, Rodriguez, J.F, Verdaguer, N.
登録日2007-07-06
公開日2007-11-27
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (3.48 Å)
主引用文献Unprecedented activation mechanism of a non-canonical RNA-dependent RNA polymerase
To be Published
2R18
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BU of 2r18 by Molmil
Structural insights into the multifunctional protein VP3 of Birnaviruses
分子名称: Capsid assembly protein VP3
著者Casanas, A, Navarro, A, Ferrer-Orta, C, Gonzalez, D, Rodriguez, J.F, Verdaguer, N.
登録日2007-08-22
公開日2008-02-05
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural insights into the multifunctional protein VP3 of birnaviruses.
Structure, 16, 2008
5LO8
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BU of 5lo8 by Molmil
The C2B domain of Rabphilin 3A in complex with PI(4,5)P2
分子名称: CALCIUM ION, GLYCEROL, Rabphilin-3A, ...
著者Ferrer-Orta, C, Verdaguer, N.
登録日2016-08-08
公開日2017-06-21
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural characterization of the Rabphilin-3A-SNAP25 interaction.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
7OMA
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BU of 7oma by Molmil
Thosea asigna virus RdRP domain elongation complex
分子名称: MAGNESIUM ION, PYROPHOSPHATE 2-, RNA (5'-R(P*AP*AP*AP*UP*UP*UP*U)-3'), ...
著者Ferrero, D.S, Falqui, M, Verdaguer, N.
登録日2021-05-21
公開日2021-07-28
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Snapshots of a Non-Canonical RdRP in Action.
Viruses, 13, 2021
7OM9
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BU of 7om9 by Molmil
Thosea asigna virus RdRP domain
分子名称: RNA-dependent RNA polymerase
著者Ferrero, D.S, Falqui, M, Verdaguer, N.
登録日2021-05-21
公開日2021-07-28
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Snapshots of a Non-Canonical RdRP in Action.
Viruses, 13, 2021
7OM6
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BU of 7om6 by Molmil
Thosea asigna virus RdRP domain in complex with RNA
分子名称: DI(HYDROXYETHYL)ETHER, RNA (5'-R(P*AP*AP*AP*UP*UP*U)-3'), RNA-dependent RNA polymerase
著者Ferrero, D.S, Falqui, M, Verdaguer, N.
登録日2021-05-21
公開日2021-07-28
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.18 Å)
主引用文献Snapshots of a Non-Canonical RdRP in Action.
Viruses, 13, 2021
7OM7
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BU of 7om7 by Molmil
Thosea asigna virus RdRP domain in complex with RNA and nucleotide UMPNPP
分子名称: 5'-O-[(S)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]uridine, DI(HYDROXYETHYL)ETHER, MANGANESE (II) ION, ...
著者Ferrero, D.S, Falqui, M, Verdaguer, N.
登録日2021-05-21
公開日2021-07-28
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Snapshots of a Non-Canonical RdRP in Action.
Viruses, 13, 2021
7OM2
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BU of 7om2 by Molmil
Thosea asigna virus RdRP domain in complex with Mg+2
分子名称: GLYCEROL, MAGNESIUM ION, RNA-dependent RNA polymerase, ...
著者Ferrero, D.S, Falqui, M, Verdaguer, N.
登録日2021-05-21
公開日2021-07-28
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.07 Å)
主引用文献Snapshots of a Non-Canonical RdRP in Action.
Viruses, 13, 2021
2R70
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BU of 2r70 by Molmil
Crystal structure of infectious bursal disease virus VP1 polymerase, cocrystallized with an oligopeptide mimicking the VP3 C-terminus.
分子名称: INFECTIOUS BURSAL VIRUS VP1 POLYMERASE
著者Garriga, D, Navarro, A, Querol-Audi, J, Abaitua, F, Rodriguez, J.F, Verdaguer, N.
登録日2007-09-07
公開日2007-11-27
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Activation mechanism of a noncanonical RNA-dependent RNA polymerase.
Proc.Natl.Acad.Sci.Usa, 104, 2007
2R72
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BU of 2r72 by Molmil
Crystal structure of infectious bursal disease virus VP1 polymerase, incubated with Mg2+ ion.
分子名称: INFECTIOUS BURSAL DISEASE VIRUS VP1 POLYMERASE, MAGNESIUM ION
著者Garriga, D, Navarro, A, Querol-Audi, J, Abaitua, F, Rodriguez, J.F, Verdaguer, N.
登録日2007-09-07
公開日2007-11-27
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (3.15 Å)
主引用文献Activation mechanism of a noncanonical RNA-dependent RNA polymerase.
Proc.Natl.Acad.Sci.Usa, 104, 2007
5LOB
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BU of 5lob by Molmil
Structure of the Ca2+-bound Rabphilin3A C2B- SNAP25 complex (C2 space group)
分子名称: CALCIUM ION, GLYCEROL, Rabphilin-3A, ...
著者Ferrer-Orta, C, Verdaguer, N.
登録日2016-08-09
公開日2017-06-21
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Structural characterization of the Rabphilin-3A-SNAP25 interaction.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5M2X
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BU of 5m2x by Molmil
Crystal structure of the full-length Zika virus NS5 protein (Human isolate Z1106033)
分子名称: NS5, PHOSPHATE ION, S-ADENOSYL-L-HOMOCYSTEINE, ...
著者Ferrero, D.S, Ruiz-Arroyo, V.M, Soler, N, Uson, I, Verdaguer, N.
登録日2016-10-13
公開日2018-06-06
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (4.991 Å)
主引用文献Supramolecular arrangement of the full-length Zika virus NS5.
Plos Pathog., 15, 2019
6SHW
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BU of 6shw by Molmil
N-terminal domain of Drosophila X Virus VP3
分子名称: SULFATE ION, Structural polyprotein
著者Ferrero, D.S, Garriga, D, Guerra, P, Uson, I, Verdaguer, N.
登録日2019-08-08
公開日2020-11-18
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure and dsRNA-binding activity of the Birnavirus Drosophila X Virus VP3 protein.
J.Virol., 2020
6SI6
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BU of 6si6 by Molmil
N-terminal domain of Drosophila X virus VP3
分子名称: GLYCEROL, IMIDAZOLE, Structural polyprotein
著者Ferrero, D.S, Garriga, D, Guerra, P, Uson, I, Verdaguer, N.
登録日2019-08-08
公開日2020-11-18
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.98 Å)
主引用文献Structure and dsRNA-binding activity of the Birnavirus Drosophila X Virus VP3 protein.
J.Virol., 2020
3GPE
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BU of 3gpe by Molmil
Crystal Structure Analysis of PKC (alpha)-C2 domain complexed with Ca2+ and PtdIns(4,5)P2
分子名称: CALCIUM ION, PHOSPHATE ION, Protein kinase C alpha type, ...
著者Ferrer-Orta, C, Querol-Audi, J, Fita, I, Verdaguer, N.
登録日2009-03-23
公開日2009-05-05
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural and mechanistic insights into the association of PKCalpha-C2 domain to PtdIns(4,5)P2.
Proc.Natl.Acad.Sci.USA, 106, 2009
5ME6
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BU of 5me6 by Molmil
Crystal Structure of eiF4E from C. melo bound to a CAP analog
分子名称: 7N-METHYL-8-HYDROGUANOSINE-5'-DIPHOSPHATE, Eukaryotic transcription initiation factor 4E
著者Querol-Audi, J, Silva, C, Miras, M, Aranda-Regules, M, Verdaguer, N.
登録日2016-11-14
公開日2017-08-23
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structure of eIF4E in Complex with an eIF4G Peptide Supports a Universal Bipartite Binding Mode for Protein Translation.
Plant Physiol., 174, 2017
5ME7
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BU of 5me7 by Molmil
Crystal Structure of eiF4E from C. melo
分子名称: Eukaryotic transcription initiation factor 4E, GLYCEROL
著者Querol-Audi, J, Silva, C, Miras, M, Aranda-Regules, M, Verdaguer, N.
登録日2016-11-14
公開日2017-08-23
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structure of eIF4E in Complex with an eIF4G Peptide Supports a Universal Bipartite Binding Mode for Protein Translation.
Plant Physiol., 174, 2017
2D7S
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BU of 2d7s by Molmil
Foot and Mouth Disease Virus RNA-dependent RNA polymerase in complex with VPg protein
分子名称: RNA-dependent RNA polymerase, VPg1 protein
著者Ferrer-Orta, C, Arias, A, Perez-Luque, R, Escarmis, C, Domingo, E, Verdaguer, N.
登録日2005-11-29
公開日2006-03-28
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献The structure of a protein primer-polymerase complex in the initiation of genome replication
Embo J., 25, 2006
4NYZ
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BU of 4nyz by Molmil
The EMCV 3Dpol structure with altered motif A conformation at 2.15A resolution
分子名称: GLUTAMINE, GLYCEROL, Genome polyprotein, ...
著者Vives-adrian, L, Lujan, C, Ferrer-orta, C, Verdaguer, N.
登録日2013-12-11
公開日2014-03-19
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献The crystal structure of a cardiovirus RNA-dependent RNA polymerase reveals an unusual conformation of the polymerase active site
J.Virol., 88, 2014
5N95
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BU of 5n95 by Molmil
Tetragonal structure of mutant V173I of 3D polymerase from Foot-and-Mouth Disease Virus
分子名称: 3D polymerase, TRIPHOSPHATE
著者Ferrer-Orta, C, Verdaguer, N.
登録日2017-02-24
公開日2017-05-10
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Molecular and Functional Bases of Selection against a Mutation Bias in an RNA Virus.
Genome Biol Evol, 9, 2017
4NS0
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BU of 4ns0 by Molmil
The C2A domain of Rabphilin 3A in complex with PI(4,5)P2
分子名称: Rabphilin-3A, SULFATE ION, [(2R)-2-octanoyloxy-3-[oxidanyl-[(1R,2R,3S,4R,5R,6S)-2,3,6-tris(oxidanyl)-4,5-diphosphonooxy-cyclohexyl]oxy-phosphoryl]oxy-propyl] octanoate
著者Guillen, J, Ferrer-Orta, C, Buxaderas, M, Perez-sanchez, D, Guerrero-Valero, M, Luengo-Gil, G, Pous, J, Guerra, P, Gomez-Fernandez, J.C, Verdaguer, N, Corbalan-Garcia, S.
登録日2013-11-27
公開日2013-12-25
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural insights into the Ca2+ and PI(4,5)P2 binding modes of the C2 domains of rabphilin 3A and synaptotagmin 1.
Proc.Natl.Acad.Sci.USA, 110, 2013
5ME5
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BU of 5me5 by Molmil
Crystal Structure of eiF4E from C. melo bound to a eIF4G peptide
分子名称: Eukaryotic transcription initiation factor 4E, SULFATE ION, eIF4G
著者Querol-Audi, J, Silva, C, Miras, M, Truniger, V, Aranda-Regules, M, Verdaguer, N.
登録日2016-11-14
公開日2017-08-23
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structure of eIF4E in Complex with an eIF4G Peptide Supports a Universal Bipartite Binding Mode for Protein Translation.
Plant Physiol., 174, 2017
4PDW
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BU of 4pdw by Molmil
A benzonitrile analogue inhibits rhinovirus replication
分子名称: 4-[(4,5-dimethoxy-2-nitrophenyl)acetyl]benzonitrile, Capsid protein VP4/VP2, GLYCEROL, ...
著者Querol-Audi, J, Guerra, P, Lacroix, C, Roche, M, Franco, D, Froeyen, M, Terme, T, Vanelle, P, Neyts, J, Leyssen, P, Verdaguer, N.
登録日2014-04-22
公開日2014-07-02
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献A novel benzonitrile analogue inhibits rhinovirus replication.
J.Antimicrob.Chemother., 69, 2014

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件を2024-10-30に公開中

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