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PDB: 112 results

6G6O
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BU of 6g6o by Molmil
Crystal structure of the computationally designed Ika8 protein: crystal packing No.1 in P63
Descriptor: GLYCEROL, Ika8
Authors:Noguchi, H, Addy, C, Simoncini, D, Van Meervelt, L, Schiex, T, Zhang, K.Y.J, Tame, J.R.H, Voet, A.R.D.
Deposit date:2018-04-01
Release date:2018-11-28
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Computational design of symmetrical eight-bladed beta-propeller proteins.
IUCrJ, 6, 2019
6GP0
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BU of 6gp0 by Molmil
Structure of mEos4b in the red fluorescent state
Descriptor: Green to red photoconvertible GFP-like protein EosFP
Authors:De Zitter, E, Adam, V, Byrdin, M, Van Meervelt, L, Dedecker, P, Bourgeois, D.
Deposit date:2018-06-04
Release date:2019-05-22
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Mechanistic investigation of mEos4b reveals a strategy to reduce track interruptions in sptPALM.
Nat.Methods, 16, 2019
6GOZ
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BU of 6goz by Molmil
Structure of mEos4b in the green long-lived dark state
Descriptor: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
Authors:De Zitter, E, Adam, V, Byrdin, M, Van Meervelt, L, Dedecker, P, Bourgeois, D.
Deposit date:2018-06-04
Release date:2019-11-13
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.406 Å)
Cite:Mechanistic Investigations of Green mEos4b Reveal a Dynamic Long-Lived Dark State.
J.Am.Chem.Soc., 2020
6GOY
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BU of 6goy by Molmil
Structure of mEos4b in the green fluorescent state
Descriptor: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
Authors:De Zitter, E, Adam, V, Byrdin, M, Van Meervelt, L, Dedecker, P, Bourgeois, D.
Deposit date:2018-06-04
Release date:2019-05-22
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Mechanistic investigation of mEos4b reveals a strategy to reduce track interruptions in sptPALM.
Nat.Methods, 16, 2019
6GP1
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BU of 6gp1 by Molmil
Structure of mEos4b in the red long-lived dark state
Descriptor: Green to red photoconvertible GFP-like protein EosFP
Authors:De Zitter, E, Adam, V, Byrdin, M, Van Meervelt, L, Dedecker, P, Bourgeois, D.
Deposit date:2018-06-04
Release date:2019-05-22
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.504 Å)
Cite:Mechanistic investigation of mEos4b reveals a strategy to reduce track interruptions in sptPALM.
Nat.Methods, 16, 2019
2H0N
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BU of 2h0n by Molmil
Structure of the fully modified left-handed cyclohexene nucleic acid sequence GTGTACAC
Descriptor: 5'-(*(XGL)P*(XTL)P*(XGL)P*(XTL)P*(XAL)P*(XCL)P*(XAL)P*(XCL)-Phosphate)-3', DIHYDROGENPHOSPHATE ION
Authors:Robeyns, K, Van Meervelt, L.
Deposit date:2006-05-15
Release date:2007-04-24
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.53 Å)
Cite:Structure of the fully modified left-handed cyclohexene nucleic acid sequence GTGTACAC.
J.Am.Chem.Soc., 130, 2008
2P8D
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BU of 2p8d by Molmil
The Structure of the Dickerson Sequence with an Incorporated CeNA Residue
Descriptor: 5'-D(*DCP*DGP*DCP*DGP*DAP*(XAR)P*DTP*DTP*DCP*DGP*DCP*DG)-3', COBALT HEXAMMINE(III)
Authors:Robeyns, K, Van Meervelt, L.
Deposit date:2007-03-22
Release date:2008-02-05
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Influence of the incorporation of a cyclohexenyl nucleic acid (CeNA) residue onto the sequence d(CGCGAATTCGCG).
Nucleic Acids Res., 36, 2008
1VTI
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BU of 1vti by Molmil
DNA-DRUG INTERACTIONS: THE CRYSTAL STRUCTURES OF D(TGATCA) COMPLEXED WITH DAUNOMYCIN
Descriptor: DAUNOMYCIN, DNA (5'-D(*TP*GP*TP*AP*CP*A)-3')
Authors:Nunn, C.M, Van Meervelt, L, Zhang, S, Moore, M.H, Kennard, O.
Deposit date:1992-03-01
Release date:2011-07-13
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:DNA-Drug Interactions: The Crystal Structures of d(TGTACA) and d(TGATCA) Complexed with Daunomycin
J.Mol.Biol., 222, 1991
1VTH
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BU of 1vth by Molmil
DNA-DRUG INTERACTIONS: THE CRYSTAL STRUCTURES OF D(TGTACA) COMPLEXED WITH DAUNOMYCIN
Descriptor: DAUNOMYCIN, DNA (5'-D(*TP*GP*TP*AP*CP*A)-3')
Authors:Nunn, C.M, Van Meervelt, L, Zhang, S, Moore, M.H, Kennard, O.
Deposit date:1992-03-01
Release date:2011-07-13
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:DNA-Drug Interactions: The Crystal Structures of d(TGTACA) and d(TGATCA) Complexed with Daunomycin
J.Mol.Biol., 222, 1991
3KNC
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BU of 3knc by Molmil
Crystal structure of the CeNA-RNA hybrid octamer ce(GCGTAGCG):r(CGCUACGC)
Descriptor: 5'-D(*(XGR)P*(XCR)P*(XGR)P*(XTR)P*(XAR)P*(XGR)P*(XCR)P*(XGR)P*(XGR))-3', 5'-R(*CP*GP*CP*UP*AP*CP*GP*C)-3', MAGNESIUM ION
Authors:Ovaere, M, Van Meervelt, L.
Deposit date:2009-11-12
Release date:2010-12-08
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The Crystal Structure of the CeNA:RNA Hybrid ce(GCGTAGCG):r(CGCUACGC).
Chemistry, 17, 2011
4EMQ
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BU of 4emq by Molmil
Crystal structure of a single mutant of Dronpa, the green-on-state PDM1-4
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, DI(HYDROXYETHYL)ETHER, Fluorescent protein Dronpa, ...
Authors:Ngan, N.B, Van Hecke, K, Van Meervelt, L.
Deposit date:2012-04-12
Release date:2012-11-21
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structural basis for the influence of a single mutation K145N on the oligomerization and photoswitching rate of Dronpa.
Acta Crystallogr.,Sect.D, 68, 2012
3OK2
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BU of 3ok2 by Molmil
Crystal structure of the ANA:RNA decamer without lattice translocation defects
Descriptor: (A6C)(A6C)(A6G)(A6U)(A6A)(A6A)(A6U)(A6G)(A6C)(A6C)(PO4), GGCAUUACGG
Authors:Ovaere, M, Van Meervelt, L.
Deposit date:2010-08-24
Release date:2011-11-30
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.963 Å)
Cite:How does hydroxyl introduction influence the double helical structure: the stabilization of an altritol nucleic acid:ribonucleic acid duplex.
Nucleic Acids Res., 40, 2012
3OK4
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BU of 3ok4 by Molmil
Crystal structure of the ANA:RNA decamer suffering from lattice translocation defects
Descriptor: ANA, RNA
Authors:Ovaere, M, Van Meervelt, L.
Deposit date:2010-08-24
Release date:2011-11-30
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.149 Å)
Cite:Crystal structure of the ANA:RNA decamer suffering from lattice translocation defects
To be Published
223D
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BU of 223d by Molmil
DIRECT OBSERVATION OF TWO BASE-PAIRING MODES OF A CYTOSINE-THYMINE ANALOGUE WITH GUANINE IN A DNA Z-FORM DUPLEX: SIGNIFICANCE FOR BASE ANALOGUE MUTAGENESIS
Descriptor: DNA (5'-D(*CP*GP*CP*GP*(C46)P*G)-3')
Authors:Moore, M.H, Van Meervelt, L, Salisbury, S.A, Kong Thoo Lin, P, Brown, D.M.
Deposit date:1995-08-01
Release date:1995-12-09
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Direct observation of two base-pairing modes of a cytosine-thymine analogue with guanine in a DNA Z-form duplex: significance for base analogue mutagenesis.
J.Mol.Biol., 251, 1995
1Z8V
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BU of 1z8v by Molmil
The Structure of d(GGCCAATTGG) Complexed with Netropsin
Descriptor: (5'-D(*GP*GP*CP*CP*AP*AP*TP*TP*GP*G)-3'), NETROPSIN
Authors:Van Hecke, K, Nam, P.C, Nguyen, M.T, Van Meervelt, L.
Deposit date:2005-03-31
Release date:2006-03-14
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Netropsin interactions in the minor groove of d(GGCCAATTGG) studied by a combination of resolution enhancement and ab initio calculations.
Febs J., 272, 2005
7A7N
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BU of 7a7n by Molmil
rsGreen0.7b in the green-off state
Descriptor: Green fluorescent protein
Authors:De Zitter, E, Dedecker, P, Van Meervelt, L.
Deposit date:2020-08-30
Release date:2021-02-17
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Structure-Function Dataset Reveals Environment Effects within a Fluorescent Protein Model System*.
Angew.Chem.Int.Ed.Engl., 60, 2021
7A84
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BU of 7a84 by Molmil
rsGreen0.7-K206A-F145H partially in the green-off state
Descriptor: Green fluorescent protein
Authors:De Zitter, E, Dedecker, P, Van Meervelt, L.
Deposit date:2020-08-30
Release date:2021-02-17
Last modified:2021-05-05
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure-Function Dataset Reveals Environment Effects within a Fluorescent Protein Model System*.
Angew.Chem.Int.Ed.Engl., 60, 2021
7A7L
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BU of 7a7l by Molmil
rsEGFP in the green-off state
Descriptor: Green fluorescent protein, TETRAETHYLENE GLYCOL
Authors:De Zitter, E, Dedecker, P, Van Meervelt, L.
Deposit date:2020-08-30
Release date:2021-02-17
Last modified:2021-05-05
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Structure-Function Dataset Reveals Environment Effects within a Fluorescent Protein Model System*.
Angew.Chem.Int.Ed.Engl., 60, 2021
7A8C
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BU of 7a8c by Molmil
rsGreen0.7-K206A-F145S in the green-off state
Descriptor: Green fluorescent protein, TRIETHYLENE GLYCOL
Authors:De Zitter, E, Dedecker, P, Van Meervelt, L.
Deposit date:2020-08-30
Release date:2021-02-17
Last modified:2021-05-05
Method:X-RAY DIFFRACTION (2.13 Å)
Cite:Structure-Function Dataset Reveals Environment Effects within a Fluorescent Protein Model System*.
Angew.Chem.Int.Ed.Engl., 60, 2021
7A81
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BU of 7a81 by Molmil
rsGreen0.7-K206A-F145A partially in the green-on state
Descriptor: Green fluorescent protein
Authors:De Zitter, E, Dedecker, P, Van Meervelt, L.
Deposit date:2020-08-30
Release date:2021-02-17
Last modified:2021-05-05
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structure-Function Dataset Reveals Environment Effects within a Fluorescent Protein Model System*.
Angew.Chem.Int.Ed.Engl., 60, 2021
7A8F
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BU of 7a8f by Molmil
rsGreen0.7-K206A-F165L in the green-on state
Descriptor: Green fluorescent protein
Authors:De Zitter, E, Dedecker, P, Van Meervelt, L.
Deposit date:2020-08-30
Release date:2021-02-17
Last modified:2021-05-05
Method:X-RAY DIFFRACTION (2.27 Å)
Cite:Structure-Function Dataset Reveals Environment Effects within a Fluorescent Protein Model System*.
Angew.Chem.Int.Ed.Engl., 60, 2021
7A7K
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BU of 7a7k by Molmil
rsEGFP in the green-on state
Descriptor: Green fluorescent protein, SULFATE ION
Authors:De Zitter, E, Dedecker, P, Van Meervelt, L.
Deposit date:2020-08-30
Release date:2021-02-17
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Structure-Function Dataset Reveals Environment Effects within a Fluorescent Protein Model System*.
Angew.Chem.Int.Ed.Engl., 60, 2021
7A7T
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BU of 7a7t by Molmil
rsGreenF partially in the green-off state
Descriptor: Green fluorescent protein
Authors:De Zitter, E, Dedecker, P, Van Meervelt, L.
Deposit date:2020-08-30
Release date:2021-02-17
Last modified:2021-05-05
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:Structure-Function Dataset Reveals Environment Effects within a Fluorescent Protein Model System*.
Angew.Chem.Int.Ed.Engl., 60, 2021
7A7P
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BU of 7a7p by Molmil
rsGreen0.7-K206A partially in the green-off state
Descriptor: 1,2-ETHANEDIOL, Green fluorescent protein, NITRATE ION
Authors:De Zitter, E, Dedecker, P, Van Meervelt, L.
Deposit date:2020-08-30
Release date:2021-02-17
Last modified:2021-05-05
Method:X-RAY DIFFRACTION (1.48 Å)
Cite:Structure-Function Dataset Reveals Environment Effects within a Fluorescent Protein Model System*.
Angew.Chem.Int.Ed.Engl., 60, 2021
7A88
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BU of 7a88 by Molmil
rsGreen0.7-K206A-F145M in the green-off state
Descriptor: Green fluorescent protein, TRIETHYLENE GLYCOL
Authors:De Zitter, E, Dedecker, P, Van Meervelt, L.
Deposit date:2020-08-30
Release date:2021-02-17
Last modified:2021-05-05
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structure-Function Dataset Reveals Environment Effects within a Fluorescent Protein Model System*.
Angew.Chem.Int.Ed.Engl., 60, 2021

224201

PDB entries from 2024-08-28

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