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PDB: 112 件

4XOW
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Structure of rsGreen0.7 in the green-on-state
分子名称: rsGreen0.7
著者De Zitter, E, Van Meervelt, L.
登録日2015-01-16
公開日2015-09-09
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献Expression-Enhanced Fluorescent Proteins Based on Enhanced Green Fluorescent Protein for Super-resolution Microscopy.
Acs Nano, 9, 2015
1JTL
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BU of 1jtl by Molmil
The crystal structure of d(GGCCAATTGG) Complexed with Distamycin
分子名称: 5'-D(*GP*GP*CP*CP*AP*AP*TP*TP*GP*G)-3', DISTAMYCIN A
著者Uytterhoeven, K, Van Meervelt, L.
登録日2001-08-21
公開日2002-08-09
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Two 1 : 1 binding modes for distamycin in the minor groove of d(GGCCAATTGG).
Eur.J.Biochem., 269, 2002
1K2Z
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The Crystal Structure of d(GGCCAATTGG) Complexed with Distamycin.
分子名称: 5'-D(*GP*GP*CP*CP*AP*AP*TP*TP*GP*G)-3', DISTAMYCIN A
著者Uytterhoeven, K, Van Meervelt, L.
登録日2001-10-01
公開日2002-08-09
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.38 Å)
主引用文献Two 1 : 1 binding modes for distamycin in the minor groove of d(GGCCAATTGG).
Eur.J.Biochem., 269, 2002
431D
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5'-D(*GP*GP*CP*CP*AP*AP*TP*TP*GP*G)-3'
分子名称: DNA (5'-D(*GP*GP*CP*CP*AP*AP*TP*TP*GP*G)-3'), MAGNESIUM ION
著者Vlieghe, D, Turkenburg, J.P, Van Meervelt, L.
登録日1998-10-09
公開日1999-09-15
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.15 Å)
主引用文献B-DNA at atomic resolution reveals extended hydration patterns.
Acta Crystallogr.,Sect.D, 55, 1999
6HKW
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Crystal structure of human SDS22
分子名称: Protein phosphatase 1 regulatory subunit 7, SULFATE ION
著者Heroes, E, Choy, M.S, Page, R, Peti, W, Ulens, C, Van Meervelt, L, Nys, M, Bollen, M.
登録日2018-09-09
公開日2019-01-30
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (3.09 Å)
主引用文献Structure-Guided Exploration of SDS22 Interactions with Protein Phosphatase PP1 and the Splicing Factor BCLAF1.
Structure, 27, 2019
1Z8V
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The Structure of d(GGCCAATTGG) Complexed with Netropsin
分子名称: (5'-D(*GP*GP*CP*CP*AP*AP*TP*TP*GP*G)-3'), NETROPSIN
著者Van Hecke, K, Nam, P.C, Nguyen, M.T, Van Meervelt, L.
登録日2005-03-31
公開日2006-03-14
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Netropsin interactions in the minor groove of d(GGCCAATTGG) studied by a combination of resolution enhancement and ab initio calculations.
Febs J., 272, 2005
223D
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DIRECT OBSERVATION OF TWO BASE-PAIRING MODES OF A CYTOSINE-THYMINE ANALOGUE WITH GUANINE IN A DNA Z-FORM DUPLEX: SIGNIFICANCE FOR BASE ANALOGUE MUTAGENESIS
分子名称: DNA (5'-D(*CP*GP*CP*GP*(C46)P*G)-3')
著者Moore, M.H, Van Meervelt, L, Salisbury, S.A, Kong Thoo Lin, P, Brown, D.M.
登録日1995-08-01
公開日1995-12-09
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Direct observation of two base-pairing modes of a cytosine-thymine analogue with guanine in a DNA Z-form duplex: significance for base analogue mutagenesis.
J.Mol.Biol., 251, 1995
3LLN
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Comparison between the orthorhombic an tetragonal form of the heptamer sequence d(GCG(xT)GCG)/d(CGCACGC).
分子名称: COBALT HEXAMMINE(III), DNA (5'-D(*CP*GP*CP*AP*CP*GP*C)-3'), DNA (5'-D(*GP*CP*GP*(XTR)P*GP*CP*G)-3')
著者Robeyns, K, Herdewijn, P, Van Meervelt, L.
登録日2010-01-29
公開日2010-08-18
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Comparison between the orthorhombic and tetragonal forms of the heptamer sequence d[GCG(xT)GCG]/d(CGCACGC)
Acta Crystallogr.,Sect.F, 66, 2010
3FL6
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Influence of the incorporation of a cyclohexenyl nucleic acid (CeNA) residue onto the sequence d(GCGTGCG)/d(CGCACGC)
分子名称: 5'-D(*CP*GP*CP*AP*CP*GP*C)-3', 5'-D(*GP*CP*GP*(XTR)P*GP*CP*G)-3', COBALT HEXAMMINE(III)
著者Robeyns, K, Herdewijn, P, Van Meervelt, L.
登録日2008-12-18
公開日2009-12-29
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.17 Å)
主引用文献Direct observation of two cyclohexenyl (CeNA) ring conformations in duplex DNA.
Artif DNA PNA XNA, 1, 2010
8BQP
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Hen Egg-White Lysozyme (HEWL) complexed with methyl-functionalised Anderson-Evans polyoxometalate
分子名称: ACETATE ION, CHLORIDE ION, Lysozyme C, ...
著者Lentink, S, Salazar Marcano, D.E, Moussawi, M.A, Vandebroek, L, Van Meervelt, L, Parac-Vogt, T.N.
登録日2022-11-21
公開日2023-03-08
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.24 Å)
主引用文献Fine-tuning non-covalent interactions between hybrid metal-oxo clusters and proteins.
Faraday Disc.Chem.Soc, 244, 2023
8BQT
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Hen Egg-White Lysozyme (HEWL) complexed with two methyl-functionalised Anderson-Evans polyoxometalates
分子名称: CHLORIDE ION, Lysozyme C, Mn-Mo(6)-O(24)-C(10) cluster
著者Lentink, S, Salazar Marcano, D.E, Moussawi, M.A, Vandebroek, L, Van Meervelt, L, Parac-Vogt, T.N.
登録日2022-11-21
公開日2023-03-08
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.47 Å)
主引用文献Fine-tuning non-covalent interactions between hybrid metal-oxo clusters and proteins.
Faraday Disc.Chem.Soc, 244, 2023
8BQQ
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Hen Egg-White Lysozyme (HEWL) complexed with amine-functionalised Anderson-Evans polyoxometalate
分子名称: CHLORIDE ION, Lysozyme C, Mn-Mo(6)-N(2)-O(24)-C(8) cluster
著者Lentink, S, Salazar Marcano, D.E, Moussawi, M.A, Vandebroek, L, Van Meervelt, L, Parac-Vogt, T.N.
登録日2022-11-21
公開日2023-03-08
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.57 Å)
主引用文献Fine-tuning non-covalent interactions between hybrid metal-oxo clusters and proteins.
Faraday Disc.Chem.Soc, 244, 2023
8BQR
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Hen Egg-White Lysozyme (HEWL) complexed with biotin-functionalised Anderson-Evans polyoxometalate
分子名称: Anderson-Evans polyoxometalate (biotin-functionalised), CALCIUM ION, Lysozyme C
著者Lentink, S, Salazar Marcano, D.E, Moussawi, M.A, Vandebroek, L, Van Meervelt, L, Parac-Vogt, T.N.
登録日2022-11-21
公開日2023-03-08
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.32 Å)
主引用文献Fine-tuning non-covalent interactions between hybrid metal-oxo clusters and proteins.
Faraday Disc.Chem.Soc, 244, 2023
6Y7N
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The crystal structure of the eight-bladed symmetrical designer protein Tako8 in the presence of tellurotungstic Anderson-Evans (TEW)
分子名称: Tako8
著者Vandebroek, L, Noguchi, H, Parac-Vogt, T.N, Van Meervelt, L, Voet, A.R.D.
登録日2020-03-02
公開日2020-12-16
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Shape and Size Complementarity-Induced Formation of Supramolecular Protein Assemblies with Metal-Oxo Clusters
Cryst.Growth Des., 2021
6Y7P
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The complex between the eight-bladed symmetrical designer protein Tako8 and 1:2 zirconium(IV) Wells-Dawson (ZrWD)
分子名称: Tako8, W-Zr-cluster
著者Vandebroek, L, Noguchi, H, Parac-Vogt, T.N, Van Meervelt, L, Voet, A.R.D.
登録日2020-03-02
公開日2020-12-16
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Shape and Size Complementarity-Induced Formation of Supramolecular Protein Assemblies with Metal-Oxo Clusters
Cryst.Growth Des., 2021
6Y7O
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The complex between the eight-bladed symmetrical designer protein Tako8 and the silicotungstic acid Keggin (STA)
分子名称: Keggin (STA), Tako8
著者Vandebroek, L, Noguchi, H, Parac-Vogt, T.N, Van Meervelt, L, Voet, A.R.D.
登録日2020-03-02
公開日2020-12-16
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Shape and Size Complementarity-Induced Formation of Supramolecular Protein Assemblies with Metal-Oxo Clusters
Cryst.Growth Des., 2021
8B65
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Structure of rsCherry crystallized in anaerobic conditions
分子名称: 1,2-ETHANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, DI(HYDROXYETHYL)ETHER, ...
著者Bui, T.Y.H, Van Meervelt, L.
登録日2022-09-26
公開日2023-04-05
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Oxygen-induced chromophore degradation in the photoswitchable red fluorescent protein rsCherry.
Int.J.Biol.Macromol., 239, 2023
8B7G
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Structure of oxygen-degraded rsCherry
分子名称: 1,2-ETHANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, DI(HYDROXYETHYL)ETHER, ...
著者Bui, T.Y.H, Van Meervelt, L.
登録日2022-09-29
公開日2023-04-05
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Oxygen-induced chromophore degradation in the photoswitchable red fluorescent protein rsCherry.
Int.J.Biol.Macromol., 239, 2023
427D
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5'-D(*CP*GP*CP*(CH2-DM1)GP*CP*G)-3'
分子名称: DAUNOMYCIN, DNA (5'-D(*CP*GP*CP*(G49)P*CP*G)-3')
著者Schuerman, G, Van Meervelt, L.
登録日1998-09-21
公開日2000-01-24
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献Conformational Flexibility of the DNA Backbone.
J.Am.Chem.Soc., 122, 2000
417D
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A THYMINE-LIKE BASE ANALOGUE FORMS WOBBLE PAIRS WITH ADENINE
分子名称: DNA (5'-D(*CP*AP*CP*GP*(C46)P*G)-3')
著者Lin, P.K.T, Schuerman, M.H, Moore, G.S, Van Meervelt, L, Loakes, D, Brown, D.M, Moore, M.H.
登録日1998-07-15
公開日1998-09-30
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献A thymine-like base analogue forms wobble pairs with adenine in a Z-DNA duplex.
J.Mol.Biol., 282, 1998
432D
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D(GGCCAATTGG) COMPLEXED WITH DAPI
分子名称: 6-AMIDINE-2-(4-AMIDINO-PHENYL)INDOLE, DNA (5'-D(*GP*GP*CP*CP*AP*AP*TP*TP*GP*G)-3')
著者Vlieghe, D, Van Meervelt, L.
登録日1998-10-14
公開日1999-12-18
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.89 Å)
主引用文献Crystal structure of d(GGCCAATTGG) complexed with DAPI reveals novel binding mode.
Biochemistry, 38, 1999
3V3D
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Crystal Structure of an eYFP single mutant
分子名称: SULFATE ION, Yellow fluorescent protein
著者Ngan, N.B, Van Hecke, K, Van Meervelt, L.
登録日2011-12-13
公開日2012-12-26
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Improving the second-order nonlinear optical response of fluorescent proteins: the symmetry argument.
J.Am.Chem.Soc., 135, 2013
6GOY
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Structure of mEos4b in the green fluorescent state
分子名称: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
著者De Zitter, E, Adam, V, Byrdin, M, Van Meervelt, L, Dedecker, P, Bourgeois, D.
登録日2018-06-04
公開日2019-05-22
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Mechanistic investigation of mEos4b reveals a strategy to reduce track interruptions in sptPALM.
Nat.Methods, 16, 2019
245D
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DNA-DRUG REFINEMENT: A COMPARISON OF THE PROGRAMS NUCLSQ, PROLSQ, SHELXL93 AND X-PLOR, USING THE LOW TEMPERATURE D(TGATCA)-NOGALAMYCIN STRUCTURE
分子名称: DNA (5'-D(*TP*GP*AP*TP*CP*A)-3'), NOGALAMYCIN
著者Schuerman, G.S, Smith, C.K, Turkenburg, J.P, Dettmar, A.N, Van Meervelt, L, Moore, M.H.
登録日1996-01-12
公開日1996-02-07
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献DNA-drug refinement: a comparison of the programs NUCLSQ, PROLSQ, SHELXL93 and X-PLOR, using the low-temperature d(TGATCA)-nogalamycin structure.
Acta Crystallogr.,Sect.D, 52, 1996
224D
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DNA-DRUG REFINEMENT: A COMPARISON OF THE PROGRAMS NUCLSQ, PROLSQ, SHELXL93 AND X-PLOR, USING THE LOW TEMPERATURE D(TGATCA)-NOGALAMYCIN STRUCTURE
分子名称: DNA (5'-D(*TP*GP*AP*TP*CP*A)-3'), NOGALAMYCIN
著者Schuerman, G.S, Smith, C.K, Turkenburg, J.P, Dettmar, A.N, Van Meervelt, L, Moore, M.H.
登録日1995-08-01
公開日1995-11-14
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献DNA-drug refinement: a comparison of the programs NUCLSQ, PROLSQ, SHELXL93 and X-PLOR, using the low-temperature d(TGATCA)-nogalamycin structure.
Acta Crystallogr.,Sect.D, 52, 1996

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