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PDB: 20 件
8SXU
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Structure of LINE-1 ORF2p with an oligo(A) template
分子名称: LINE-1 retrotransposable element ORF2 protein, RNA (25-MER)
著者van Eeuwen, T, Taylor, M.S, Rout, M.P.
登録日2023-05-24
公開日2024-01-10
最終更新日2024-02-14
実験手法ELECTRON MICROSCOPY (3.66 Å)
主引用文献Structures, functions and adaptations of the human LINE-1 ORF2 protein.
Nature, 626, 2024
8SXT
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Structure of LINE-1 ORF2p with template:primer hybrid
分子名称: DNA primer, LINE-1 retrotransposable element ORF2 protein, MAGNESIUM ION, ...
著者van Eeuwen, T, Taylor, M.S, Rout, M.P.
登録日2023-05-24
公開日2024-01-10
最終更新日2024-02-14
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Structures, functions and adaptations of the human LINE-1 ORF2 protein.
Nature, 626, 2024
7KUE
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CryoEM structure of Yeast TFIIK (Kin28/Ccl1/Tfb3) Complex
分子名称: ADENOSINE-5'-DIPHOSPHATE, ALUMINUM FLUORIDE, Cyclin CCL1, ...
著者van Eeuwen, T, Murakami, K, Li, T, Tsai, K.L.
登録日2020-11-24
公開日2021-04-28
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Structure of TFIIK for phosphorylation of CTD of RNA polymerase II.
Sci Adv, 7, 2021
7M2U
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Nucleotide Excision Repair complex TFIIH Rad4-33
分子名称: CALCIUM ION, DNA repair helicase RAD25, DNA repair helicase RAD3, ...
著者van Eeuwen, T, Murakami, K.
登録日2021-03-17
公開日2021-07-28
実験手法ELECTRON MICROSCOPY (8.2 Å)
主引用文献Cryo-EM structure of TFIIH/Rad4-Rad23-Rad33 in damaged DNA opening in nucleotide excision repair.
Nat Commun, 12, 2021
6XI8
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Yeast TFIIK (Kin28/Ccl1/Tfb3) Complex
分子名称: ADENOSINE-5'-DIPHOSPHATE, ALUMINUM FLUORIDE, Cyclin CCL1, ...
著者van Eeuwen, T, Murakami, K, Li, T, Tsai, K.L.
登録日2020-06-19
公開日2021-04-28
実験手法ELECTRON MICROSCOPY (3.64 Å)
主引用文献Structure of TFIIK for phosphorylation of CTD of RNA polymerase II.
Sci Adv, 7, 2021
7K01
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Structure of TFIIH in TFIIH/Rad4-Rad23-Rad33 DNA opening complex
分子名称: DNA repair helicase RAD25, DNA repair helicase RAD3, General transcription and DNA repair factor IIH subunit SSL1, ...
著者van Eeuwen, T, Min, J.H, Murakami, K.
登録日2020-09-02
公開日2021-07-28
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Cryo-EM structure of TFIIH/Rad4-Rad23-Rad33 in damaged DNA opening in nucleotide excision repair.
Nat Commun, 12, 2021
7K04
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Structure of TFIIH/Rad4-Rad23-Rad33/DNA in DNA opening
分子名称: CALCIUM ION, DNA repair helicase RAD25, DNA repair helicase RAD3, ...
著者van Eeuwen, T, Min, J.H, Murakami, K.
登録日2020-09-03
公開日2021-07-28
実験手法ELECTRON MICROSCOPY (9.25 Å)
主引用文献Cryo-EM structure of TFIIH/Rad4-Rad23-Rad33 in damaged DNA opening in nucleotide excision repair.
Nat Commun, 12, 2021
7JPN
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Cryo-EM structure of Arpin-bound Arp2/3 complex
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Actin-related protein 2, Actin-related protein 2/3 complex subunit 1B, ...
著者van Eeuwen, T, Fregoso, F.E, Dominguez, R, Zimmet, A, Boczkowska, M, Rebowski, G.
登録日2020-08-09
公開日2022-02-09
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (3.24 Å)
主引用文献Molecular mechanism of Arp2/3 complex inhibition by Arpin.
Nat Commun, 13, 2022
8EAX
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Octameric prenyltransferase domain of fusicoccadiene Synthase with C2 symmetry sans transiently associating cyclase domains
分子名称: Fusicoccadiene synthase
著者Faylo, J.L, van Eeuwen, T, Christianson, D.W.
登録日2022-08-29
公開日2022-11-02
最終更新日2022-11-16
実験手法ELECTRON MICROSCOPY (3.73 Å)
主引用文献Transient Prenyltransferase-Cyclase Association in Fusicoccadiene Synthase, an Assembly-Line Terpene Synthase.
Biochemistry, 61, 2022
7T5Q
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Cryo-EM Structure of a Transition State of Arp2/3 Complex Activation
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Actin, ...
著者Rebowski, G, van Eeuwen, T, Boczkowska, M, Dominguez, R.
登録日2021-12-13
公開日2023-06-14
最終更新日2023-08-02
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Cryo-EM structure of an Arp2/3 complex mini-branch capped by capping protein (CapZ)
To Be Published
6UHC
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CryoEM structure of human Arp2/3 complex with bound NPFs
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Actin-related protein 2, Actin-related protein 2/3 complex subunit 1B, ...
著者Zimmet, A, van Eeuwen, T, Dominguez, R.
登録日2019-09-27
公開日2020-07-01
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Cryo-EM structure of NPF-bound human Arp2/3 complex and activation mechanism.
Sci Adv, 6, 2020
8TAH
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Cryo-EM structure of Cortactin-bound to Arp2/3 complex
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Actin-related protein 2, Actin-related protein 2/3 complex subunit 1A, ...
著者Fregoso, F.E, van Eeuwen, T, Dominguez, R.
登録日2023-06-27
公開日2023-09-27
最終更新日2024-01-31
実験手法ELECTRON MICROSCOPY (2.89 Å)
主引用文献Mechanism of synergistic activation of Arp2/3 complex by cortactin and WASP-family proteins.
Nat Commun, 14, 2023
6XKZ
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R. capsulatus CIII2CIV tripartite super-complex, conformation B (SC-1B)
分子名称: COPPER (II) ION, Cbb3-type cytochrome c oxidase subunit CcoP,Cytochrome c-type cyt cy, Cytochrome b, ...
著者Steimle, S, Van Eeuwen, T, Ozturk, Y, Kim, H.J, Braitbard, M, Selamoglu, N, Garcia, B.A, Schneidman-Duhovny, D, Murakami, K, Daldal, F.
登録日2020-06-27
公開日2020-12-30
最終更新日2021-03-03
実験手法ELECTRON MICROSCOPY (7.2 Å)
主引用文献Cryo-EM structures of engineered active bc 1 -cbb 3 type CIII 2 CIV super-complexes and electronic communication between the complexes.
Nat Commun, 12, 2021
6XKW
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R. capsulatus CIII2CIV bipartite super-complex (SC-2A) with CcoH/cy
分子名称: COPPER (II) ION, Cbb3-type cytochrome c oxidase subunit CcoP, Cytochrome b, ...
著者Steimle, S, Van Eeuwen, T, Ozturk, Y, Kim, H.J, Braitbard, M, Selamoglu, N, Garcia, B.A, Schneidman-Duhovny, D, Murakami, K, Daldal, F.
登録日2020-06-27
公開日2020-12-30
最終更新日2021-03-03
実験手法ELECTRON MICROSCOPY (5.2 Å)
主引用文献Cryo-EM structures of engineered active bc 1 -cbb 3 type CIII 2 CIV super-complexes and electronic communication between the complexes.
Nat Commun, 12, 2021
6XKX
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R. capsulatus CIII2CIV tripartite super-complex, conformation A (SC-1A)
分子名称: COPPER (II) ION, Cbb3-type cytochrome c oxidase subunit CcoP,Cytochrome c-type cyt cy, Cytochrome b, ...
著者Steimle, S, Van Eeuwen, T, Ozturk, Y, Kim, H.J, Braitbard, M, Selamoglu, N, Garcia, B.A, Schneidman-Duhovny, D, Murakami, K, Daldal, F.
登録日2020-06-27
公開日2020-12-30
最終更新日2021-03-03
実験手法ELECTRON MICROSCOPY (6.1 Å)
主引用文献Cryo-EM structures of engineered active bc 1 -cbb 3 type CIII 2 CIV super-complexes and electronic communication between the complexes.
Nat Commun, 12, 2021
6XKV
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R. capsulatus cyt bc1 with both FeS proteins in b position (CIII2 b-b)
分子名称: Cytochrome b, Cytochrome c1, FE2/S2 (INORGANIC) CLUSTER, ...
著者Steimle, S, Van Eeuwen, T, Ozturk, Y, Kim, H.J, Braitbard, M, Selamoglu, N, Garcia, B.A, Schneidman-Duhovny, D, Murakami, K, Daldal, F.
登録日2020-06-27
公開日2020-12-30
最終更新日2021-07-14
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Cryo-EM structures of engineered active bc 1 -cbb 3 type CIII 2 CIV super-complexes and electronic communication between the complexes.
Nat Commun, 12, 2021
6XKT
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R. capsulatus cyt bc1 with both FeS proteins in c position (CIII2 c-c)
分子名称: Cytochrome b, Cytochrome c1, FE2/S2 (INORGANIC) CLUSTER, ...
著者Steimle, S, Van Eeuwen, T, Ozturk, Y, Kim, H.J, Braitbard, M, Selamoglu, N, Garcia, B.A, Schneidman-Duhovny, D, Murakami, K, Daldal, F.
登録日2020-06-27
公開日2020-12-30
最終更新日2021-03-03
実験手法ELECTRON MICROSCOPY (3.75 Å)
主引用文献Cryo-EM structures of engineered active bc 1 -cbb 3 type CIII 2 CIV super-complexes and electronic communication between the complexes.
Nat Commun, 12, 2021
6XI0
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R. capsulatus cyt bc1 (CIII2) at 3.3A
分子名称: Cytochrome b, Cytochrome c1, FE2/S2 (INORGANIC) CLUSTER, ...
著者Steimle, S, Van Eeuwen, T, Ozturk, Y, Kim, H.J, Braitbard, M, Selamoglu, N, Garcia, B.A, Schneidman-Duhovny, D, Murakami, K, Daldal, F.
登録日2020-06-19
公開日2020-12-30
最終更新日2021-03-03
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Cryo-EM structures of engineered active bc 1 -cbb 3 type CIII 2 CIV super-complexes and electronic communication between the complexes.
Nat Commun, 12, 2021
6XKU
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R. capsulatus cyt bc1 with one FeS protein in b position and one in c position (CIII2 b-c)
分子名称: Cytochrome b, Cytochrome c1, FE2/S2 (INORGANIC) CLUSTER, ...
著者Steimle, S, Van Eeuwen, T, Ozturk, Y, Kim, H.J, Braitbard, M, Selamoglu, N, Garcia, B.A, Schneidman-Duhovny, D, Murakami, K, Daldal, F.
登録日2020-06-27
公開日2020-12-30
最終更新日2021-03-03
実験手法ELECTRON MICROSCOPY (4.2 Å)
主引用文献Cryo-EM structures of engineered active bc 1 -cbb 3 type CIII 2 CIV super-complexes and electronic communication between the complexes.
Nat Commun, 12, 2021
7JTH
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Cryo-EM structure of unliganded octameric prenyltransferase domain of Phomopsis amygdali fusicoccadiene synthase
分子名称: Fusicoccadiene synthase
著者Faylo, J.L, van Eeuwen, T, Murakami, K, Christianson, D.W.
登録日2020-08-17
公開日2021-04-28
最終更新日2021-07-28
実験手法ELECTRON MICROSCOPY (4 Å)
主引用文献Structural insight on assembly-line catalysis in terpene biosynthesis.
Nat Commun, 12, 2021

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件を2024-05-15に公開中

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